RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 CBFA2T2O43439 604 aa24.16■■□□□ 1.46
SH3D21-202ENST00000474766 NCAPHQ15003 741 aa24.16■■□□□ 1.46
SH3D21-202ENST00000474766 SLC12A7Q9Y666 1083 aa24.16■■□□□ 1.46
SH3D21-202ENST00000474766 ECM29Q5VYK3 1845 aa24.16■■□□□ 1.46
SH3D21-202ENST00000474766 ZNF804BA4D1E1 1349 aa24.16■■□□□ 1.46
SH3D21-202ENST00000474766 ZSCAN12O43309 604 aa24.15■■□□□ 1.46
SH3D21-202ENST00000474766 GPR161Q8N6U8 529 aaKnown RBP24.15■■□□□ 1.46
SH3D21-202ENST00000474766 ANKRD2Q9GZV1 360 aa24.15■■□□□ 1.46
SH3D21-202ENST00000474766 SLC4A4Q9Y6R1 1079 aa24.15■■□□□ 1.46
SH3D21-202ENST00000474766 A0A087WWV3 80 aa24.15■■□□□ 1.46
SH3D21-202ENST00000474766 GOLGA6L9A6NEM1 432 aa24.15■■□□□ 1.46
SH3D21-202ENST00000474766 C6orf229H3BNL8 230 aa24.15■■□□□ 1.46
SH3D21-202ENST00000474766 PPIP5K2O43314 1243 aa24.15■■□□□ 1.46
SH3D21-202ENST00000474766 UFL1O94874 794 aa24.15■■□□□ 1.46
SH3D21-202ENST00000474766 SUPT20HQ8NEM7 779 aa24.15■■□□□ 1.46
SH3D21-202ENST00000474766 PSD3Q9NYI0 1048 aa24.15■■□□□ 1.46
SH3D21-202ENST00000474766 PPP6R2O75170 966 aa24.14■■□□□ 1.45
SH3D21-202ENST00000474766 WDHD1O75717 1129 aaPredicted RBP24.14■■□□□ 1.45
SH3D21-202ENST00000474766 ZNF202O95125 648 aa24.14■■□□□ 1.45
SH3D21-202ENST00000474766 GGA1Q9UJY5 639 aa24.14■■□□□ 1.45
SH3D21-202ENST00000474766 SLC3A2P08195 630 aaKnown RBP24.13■■□□□ 1.45
SH3D21-202ENST00000474766 IFNAR1P17181 557 aa24.13■■□□□ 1.45
SH3D21-202ENST00000474766 FANCCQ00597 558 aa24.13■■□□□ 1.45
SH3D21-202ENST00000474766 PTPAQ15257 358 aa24.13■■□□□ 1.45
SH3D21-202ENST00000474766 LARGE2Q8N3Y3 721 aa24.13■■□□□ 1.45
SH3D21-202ENST00000474766 ERCC4Q92889 916 aaPredicted RBP24.13■■□□□ 1.45
SH3D21-202ENST00000474766 MYL10Q9BUA6 226 aa24.13■■□□□ 1.45
SH3D21-202ENST00000474766 LRP2BPQ9P2M1 347 aa24.13■■□□□ 1.45
SH3D21-202ENST00000474766 FMNL1O95466 1100 aaPredicted RBP24.13■■□□□ 1.45
SH3D21-202ENST00000474766 TDO2P48775 406 aa24.13■■□□□ 1.45
SH3D21-202ENST00000474766 CC2D1AQ6P1N0 951 aaPredicted RBP24.13■■□□□ 1.45
SH3D21-202ENST00000474766 REXO1L1PQ8IX06 675 aa24.13■■□□□ 1.45
SH3D21-202ENST00000474766 MAP3K14Q99558 947 aa24.13■■□□□ 1.45
SH3D21-202ENST00000474766 VGLL3A8MV65 326 aa24.12■■□□□ 1.45
SH3D21-202ENST00000474766 TBC1D8O95759 1140 aa24.12■■□□□ 1.45
SH3D21-202ENST00000474766 PFKFB1P16118 471 aa24.12■■□□□ 1.45
SH3D21-202ENST00000474766 ZC3H4Q9UPT8 1303 aaKnown RBP24.12■■□□□ 1.45
SH3D21-202ENST00000474766 FAM237AA0A1B0GTK4 181 aa24.11■■□□□ 1.45
SH3D21-202ENST00000474766 URI1O94763 535 aaPredicted RBP24.11■■□□□ 1.45
SH3D21-202ENST00000474766 SSRP1Q08945 709 aaKnown RBP24.11■■□□□ 1.45
SH3D21-202ENST00000474766 JAKMIP3Q5VZ66 844 aa24.11■■□□□ 1.45
SH3D21-202ENST00000474766 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.11■■□□□ 1.45
SH3D21-202ENST00000474766 CWC15Q9P013 229 aaKnown RBP24.11■■□□□ 1.45
SH3D21-202ENST00000474766 MROH7-TTC4A0A0A0MT08 1334 aa24.11■■□□□ 1.45
SH3D21-202ENST00000474766 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.11■■□□□ 1.45
SH3D21-202ENST00000474766 RIMBP2O15034 1052 aa24.11■■□□□ 1.45
SH3D21-202ENST00000474766 RCAN1P53805 252 aa24.11■■□□□ 1.45
SH3D21-202ENST00000474766 TRIM29Q14134 588 aa24.11■■□□□ 1.45
SH3D21-202ENST00000474766 JMYQ8N9B5 988 aa24.11■■□□□ 1.45
SH3D21-202ENST00000474766 CARD6Q9BX69 1037 aa24.11■■□□□ 1.45
SH3D21-202ENST00000474766 VPS33BQ9H267 617 aa24.11■■□□□ 1.45
SH3D21-202ENST00000474766 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.11■■□□□ 1.45
SH3D21-202ENST00000474766 HPSEQ9Y251 543 aa24.11■■□□□ 1.45
SH3D21-202ENST00000474766 LEMD3Q9Y2U8 911 aa24.11■■□□□ 1.45
SH3D21-202ENST00000474766 ATP2B4P23634 1241 aa24.1■■□□□ 1.45
SH3D21-202ENST00000474766 OAS2P29728 719 aaKnown RBP24.1■■□□□ 1.45
SH3D21-202ENST00000474766 UBE4AQ14139 1066 aa24.1■■□□□ 1.45
SH3D21-202ENST00000474766 SART3Q15020 963 aaKnown RBP24.1■■□□□ 1.45
SH3D21-202ENST00000474766 TMTC2Q8N394 836 aa24.1■■□□□ 1.45
SH3D21-202ENST00000474766 MIGA1Q8NAN2 632 aa24.1■■□□□ 1.45
SH3D21-202ENST00000474766 ZNF784Q8NCA9 323 aaPredicted RBP24.1■■□□□ 1.45
SH3D21-202ENST00000474766 WASF1Q92558 559 aa24.1■■□□□ 1.45
SH3D21-202ENST00000474766 RNF41Q9H4P4 317 aaPredicted RBP24.1■■□□□ 1.45
SH3D21-202ENST00000474766 POLR3GO15318 223 aaPredicted RBP24.1■■□□□ 1.45
SH3D21-202ENST00000474766 KLRK1P26718 216 aa24.1■■□□□ 1.45
SH3D21-202ENST00000474766 MARCKSP29966 332 aaPredicted RBP24.1■■□□□ 1.45
SH3D21-202ENST00000474766 SMC1AQ14683 1233 aaKnown RBP24.1■■□□□ 1.45
SH3D21-202ENST00000474766 ADGRA1Q86SQ6 560 aa24.1■■□□□ 1.45
SH3D21-202ENST00000474766 ZNF526Q8TF50 670 aaPredicted RBP24.1■■□□□ 1.45
SH3D21-202ENST00000474766 EXOC4Q96A65 974 aa24.1■■□□□ 1.45
SH3D21-202ENST00000474766 SLC26A6Q9BXS9 759 aa24.1■■□□□ 1.45
SH3D21-202ENST00000474766 ANAPC4Q9UJX5 808 aa24.1■■□□□ 1.45
SH3D21-202ENST00000474766 IRS2Q9Y4H2 1338 aa24.1■■□□□ 1.45
SH3D21-202ENST00000474766 ARHGAP6O43182 974 aa24.09■■□□□ 1.45
SH3D21-202ENST00000474766 CYP7A1P22680 504 aa24.09■■□□□ 1.45
SH3D21-202ENST00000474766 NEK11Q8NG66 645 aa24.09■■□□□ 1.45
SH3D21-202ENST00000474766 JDP2Q8WYK2 163 aa24.09■■□□□ 1.45
SH3D21-202ENST00000474766 GNL3LQ9NVN8 582 aaKnown RBP24.09■■□□□ 1.45
SH3D21-202ENST00000474766 ZNF541Q9H0D2 1346 aa24.09■■□□□ 1.45
SH3D21-202ENST00000474766 FZD9O00144 591 aa24.08■■□□□ 1.45
SH3D21-202ENST00000474766 MAP3K9P80192 1104 aa24.08■■□□□ 1.45
SH3D21-202ENST00000474766 PPARAQ07869 468 aa24.08■■□□□ 1.45
SH3D21-202ENST00000474766 GNL2Q13823 731 aaKnown RBP24.08■■□□□ 1.45
SH3D21-202ENST00000474766 WTAPQ15007 396 aa24.08■■□□□ 1.45
SH3D21-202ENST00000474766 RSRC2Q7L4I2 434 aaKnown RBP24.08■■□□□ 1.45
SH3D21-202ENST00000474766 TXNRD3Q86VQ6 643 aa24.08■■□□□ 1.45
SH3D21-202ENST00000474766 RABGGTAQ92696 567 aa24.08■■□□□ 1.45
SH3D21-202ENST00000474766 SMARCE1Q969G3 411 aa24.08■■□□□ 1.45
SH3D21-202ENST00000474766 EYA3Q99504 573 aa24.08■■□□□ 1.45
SH3D21-202ENST00000474766 ARFGAP3Q9NP61 516 aa24.08■■□□□ 1.45
SH3D21-202ENST00000474766 UBE2Q2LH0YL09 131 aa24.08■■□□□ 1.44
SH3D21-202ENST00000474766 SHC4Q6S5L8 630 aa24.08■■□□□ 1.44
SH3D21-202ENST00000474766 NIM1KQ8IY84 436 aa24.08■■□□□ 1.44
SH3D21-202ENST00000474766 IQUBQ8NA54 791 aa24.08■■□□□ 1.44
SH3D21-202ENST00000474766 FBXW7Q969H0 707 aa24.08■■□□□ 1.44
SH3D21-202ENST00000474766 SCN9AQ15858 1988 aa24.07■■□□□ 1.44
SH3D21-202ENST00000474766 SASH3O75995 380 aa24.07■■□□□ 1.44
SH3D21-202ENST00000474766 RTN1Q16799 776 aa24.07■■□□□ 1.44
SH3D21-202ENST00000474766 RRP12Q5JTH9 1297 aaKnown RBP24.07■■□□□ 1.44
SH3D21-202ENST00000474766 KRBA2Q6ZNG9 492 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms