RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 CWC22Q9HCG8 908 aaKnown RBP1.82□□□□□ -2.12
HDAC9-222ENST00000474742 GPATCH2Q9NW75 528 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 FAM8A1Q9UBU6 413 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 PCDHB5Q9Y5E4 795 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 ST14Q9Y5Y6 855 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 SUV39H1O43463 412 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 TRIM37O94972 964 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 TFE3P19532 575 aaPredicted RBP1.81□□□□□ -2.12
HDAC9-222ENST00000474742 EIF4BP23588 611 aaKnown RBP1.81□□□□□ -2.12
HDAC9-222ENST00000474742 CHRNEQ04844 493 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 TNK2Q07912 1038 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 DUSP4Q13115 394 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 MRPL58Q14197 206 aaKnown RBP1.81□□□□□ -2.12
HDAC9-222ENST00000474742 SLC14A2Q15849 920 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 CLEC16AQ2KHT3 1053 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 VMACQ2NL98 169 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 ADGRF1Q5T601 910 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 PCNX4Q63HM2 1172 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 OLFML2BQ68BL8 750 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 DIEXFQ68CQ4 756 aaKnown RBP1.81□□□□□ -2.12
HDAC9-222ENST00000474742 C22orf34Q6ZV56 151 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 TMC4Q7Z404 712 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 CDH24Q86UP0 819 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 SIRT2Q8IXJ6 389 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 PIWIL2Q8TC59 973 aaKnown RBP1.81□□□□□ -2.12
HDAC9-222ENST00000474742 CEP44Q9C0F1 390 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 SRCIN1Q9C0H9 1055 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 XYLT2Q9H1B5 865 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 COPRSQ9NQ92 184 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 SRRDQ9UH36 339 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 PPM1HQ9ULR3 514 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 SPG7Q9UQ90 795 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 TLR6Q9Y2C9 796 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 YBX2Q9Y2T7 364 aaKnown RBP1.81□□□□□ -2.12
HDAC9-222ENST00000474742 USP31Q70CQ4 1352 aa1.81□□□□□ -2.12
HDAC9-222ENST00000474742 MYOCOSA0A1B0GUC4 107 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 ZC3H12DA2A288 527 aaKnown RBP1.8□□□□□ -2.12
HDAC9-222ENST00000474742 GFRA2O00451 464 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 GIPC1O14908 333 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 GRIN3BO60391 1043 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 FSHBP01225 129 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 ESR1P03372 595 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 ZNF16P17020 682 aaPredicted RBP1.8□□□□□ -2.12
HDAC9-222ENST00000474742 GARTP22102 1010 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 GALK1P51570 392 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 MFAP1P55081 439 aaKnown RBP1.8□□□□□ -2.12
HDAC9-222ENST00000474742 ATP2B2Q01814 1243 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 SEPT6Q14141 434 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 SNX17Q15036 470 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 MAP3K11Q16584 847 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 ZNF827Q17R98 1081 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 WIPI1Q5MNZ9 446 aaPredicted RBP1.8□□□□□ -2.12
HDAC9-222ENST00000474742 UBXN11Q5T124 520 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 PRAMEF13Q5VWM6 474 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 CNKSR3Q6P9H4 555 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 LRFN4Q6PJG9 635 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 AGMOQ6ZNB7 445 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 SV2BQ7L1I2 683 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 HOMEZQ8IX15 550 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 SYT8Q8NBV8 401 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 PHC3Q8NDX5 983 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 RIN3Q8TB24 985 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 PANK1Q8TE04 598 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 GIPC2Q8TF65 315 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 TEPSINQ96N21 525 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 ASCC2Q9H1I8 757 aaPredicted RBP1.8□□□□□ -2.12
HDAC9-222ENST00000474742 ADAM7Q9H2U9 754 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 ZNF552Q9H707 407 aaPredicted RBP1.8□□□□□ -2.12
HDAC9-222ENST00000474742 FBRSQ9HAH7 460 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 ZMYM5Q9UJ78 669 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 KCNH3Q9ULD8 1083 aa1.8□□□□□ -2.12
HDAC9-222ENST00000474742 SSU72P8A0A1W2PR75 194 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 FAM221AA4D161 298 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 UNCXA6NJT0 531 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 SLC22A31A6NKX4 558 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 WASH4PA8MWX3 477 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 K7ESM1 405 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 CST3P01034 146 aaPredicted RBP1.79□□□□□ -2.12
HDAC9-222ENST00000474742 ZGLP1P0C6A0 271 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 RPL10P27635 214 aaKnown RBP1.79□□□□□ -2.12
HDAC9-222ENST00000474742 GRK4P32298 578 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 TNNI2P48788 182 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 LIG3P49916 1009 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 ST13P50502 369 aaKnown RBP1.79□□□□□ -2.12
HDAC9-222ENST00000474742 PSMD2Q13200 908 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 SLBPQ14493 270 aaKnown RBP eCLIP1.79□□□□□ -2.12
HDAC9-222ENST00000474742 TAF1CQ15572 869 aaPredicted RBP1.79□□□□□ -2.12
HDAC9-222ENST00000474742 CCDC85BQ15834 202 aaPredicted RBP1.79□□□□□ -2.12
HDAC9-222ENST00000474742 NKG7Q16617 165 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 TIGD5Q53EQ6 642 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 TMCO4Q5TGY1 634 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 TTBK2Q6IQ55 1244 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 BNC2Q6ZN30 1099 aaPredicted RBP1.79□□□□□ -2.12
HDAC9-222ENST00000474742 FRMD5Q7Z6J6 570 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 ANKS4BQ8N8V4 417 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 RGS22Q8NE09 1264 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 PLPPR2Q96GM1 343 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 RHOVQ96L33 236 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 PWWP2AQ96N64 755 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 FRMD6Q96NE9 622 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms