RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 FLOT1O75955 427 aa18.1■□□□□ 0.49
VARS-223ENST00000474643 APPP05067 770 aa18.1■□□□□ 0.49
VARS-223ENST00000474643 TRIM32Q13049 653 aa18.1■□□□□ 0.49
VARS-223ENST00000474643 PLS1Q14651 629 aa18.1■□□□□ 0.49
VARS-223ENST00000474643 COG2Q14746 738 aa18.1■□□□□ 0.49
VARS-223ENST00000474643 Q3C1V9 767 aa18.1■□□□□ 0.49
VARS-223ENST00000474643 MFSD14CQ5VZR4 134 aa18.1■□□□□ 0.49
VARS-223ENST00000474643 CHRDL2Q6WN34 429 aa18.1■□□□□ 0.49
VARS-223ENST00000474643 ANKLE1Q8NAG6 615 aa18.1■□□□□ 0.49
VARS-223ENST00000474643 OTUD7AQ8TE49 926 aaPredicted RBP18.1■□□□□ 0.49
VARS-223ENST00000474643 LPAR1Q92633 364 aa18.1■□□□□ 0.49
VARS-223ENST00000474643 PAWRQ96IZ0 340 aaKnown RBP18.1■□□□□ 0.49
VARS-223ENST00000474643 HOXC10Q9NYD6 342 aa18.1■□□□□ 0.49
VARS-223ENST00000474643 COLQQ9Y215 455 aaPredicted RBP18.1■□□□□ 0.49
VARS-223ENST00000474643 MYH8P13535 1937 aa18.1■□□□□ 0.49
VARS-223ENST00000474643 ZFYP08048 801 aaPredicted RBP18.09■□□□□ 0.49
VARS-223ENST00000474643 AKR1B1P15121 316 aa18.09■□□□□ 0.49
VARS-223ENST00000474643 TDO2P48775 406 aa18.09■□□□□ 0.49
VARS-223ENST00000474643 CDK8P49336 464 aa18.09■□□□□ 0.49
VARS-223ENST00000474643 MAP2K5Q13163 448 aa18.09■□□□□ 0.49
VARS-223ENST00000474643 C12orf60Q5U649 245 aa18.09■□□□□ 0.49
VARS-223ENST00000474643 SMC5Q8IY18 1101 aa18.09■□□□□ 0.49
VARS-223ENST00000474643 SPICE1Q8N0Z3 855 aa18.09■□□□□ 0.49
VARS-223ENST00000474643 KBTBD3Q8NAB2 608 aa18.09■□□□□ 0.49
VARS-223ENST00000474643 PUS7LQ9H0K6 701 aaKnown RBP18.09■□□□□ 0.49
VARS-223ENST00000474643 MKNK2Q9HBH9 465 aa18.09■□□□□ 0.49
VARS-223ENST00000474643 DOCK3Q8IZD9 2030 aa18.09■□□□□ 0.49
VARS-223ENST00000474643 SLC15A5A6NIM6 579 aa18.08■□□□□ 0.48
VARS-223ENST00000474643 SPDYE16A6NNV3 312 aaPredicted RBP18.08■□□□□ 0.48
VARS-223ENST00000474643 MINDY4BA8MYZ0 360 aa18.08■□□□□ 0.48
VARS-223ENST00000474643 GUCY1A2P33402 732 aa18.08■□□□□ 0.48
VARS-223ENST00000474643 C16orf86Q6ZW13 317 aa18.08■□□□□ 0.48
VARS-223ENST00000474643 UBE2Q1Q7Z7E8 422 aa18.08■□□□□ 0.48
VARS-223ENST00000474643 DPP9Q86TI2 863 aa18.08■□□□□ 0.48
VARS-223ENST00000474643 STK11IPQ8N1F8 1099 aa18.08■□□□□ 0.48
VARS-223ENST00000474643 NBPF3Q9H094 633 aa18.08■□□□□ 0.48
VARS-223ENST00000474643 GOPCQ9HD26 462 aa18.08■□□□□ 0.48
VARS-223ENST00000474643 A0A1W2PRG0 241 aa18.07■□□□□ 0.48
VARS-223ENST00000474643 CHGBP05060 677 aa18.07■□□□□ 0.48
VARS-223ENST00000474643 CNGA1P29973 690 aa18.07■□□□□ 0.48
VARS-223ENST00000474643 CCL14Q16627 93 aa18.07■□□□□ 0.48
VARS-223ENST00000474643 MORN1Q5T089 497 aa18.07■□□□□ 0.48
VARS-223ENST00000474643 LBX2Q6XYB7 198 aa18.07■□□□□ 0.48
VARS-223ENST00000474643 CHD1LQ86WJ1 897 aa18.07■□□□□ 0.48
VARS-223ENST00000474643 CLEC10AQ8IUN9 316 aa18.07■□□□□ 0.48
VARS-223ENST00000474643 MB21D1Q8N884 522 aa18.07■□□□□ 0.48
VARS-223ENST00000474643 APPBP2Q92624 585 aa18.07■□□□□ 0.48
VARS-223ENST00000474643 CRISPLD2Q9H0B8 497 aa18.07■□□□□ 0.48
VARS-223ENST00000474643 ZNF287Q9HBT7 754 aa18.07■□□□□ 0.48
VARS-223ENST00000474643 BTBD7Q9P203 1132 aa18.07■□□□□ 0.48
VARS-223ENST00000474643 BAZ2AQ9UIF9 1905 aaKnown RBP18.07■□□□□ 0.48
VARS-223ENST00000474643 RNF113AO15541 343 aaKnown RBP18.06■□□□□ 0.48
VARS-223ENST00000474643 CNMDO75829 334 aa18.06■□□□□ 0.48
VARS-223ENST00000474643 GNAT2P19087 354 aa18.06■□□□□ 0.48
VARS-223ENST00000474643 PTPREP23469 700 aa18.06■□□□□ 0.48
VARS-223ENST00000474643 CTR9Q6PD62 1173 aa18.06■□□□□ 0.48
VARS-223ENST00000474643 NCAPG2Q86XI2 1143 aa18.06■□□□□ 0.48
VARS-223ENST00000474643 FSD1Q9BTV5 496 aa18.06■□□□□ 0.48
VARS-223ENST00000474643 NACAP1Q9BZK3 213 aa18.06■□□□□ 0.48
VARS-223ENST00000474643 C11orf49Q9H6J7 331 aa18.06■□□□□ 0.48
VARS-223ENST00000474643 VCPKMTQ9H867 229 aa18.06■□□□□ 0.48
VARS-223ENST00000474643 KANSL2Q9H9L4 492 aa18.06■□□□□ 0.48
VARS-223ENST00000474643 SLC5A4Q9NY91 659 aa18.06■□□□□ 0.48
VARS-223ENST00000474643 TMX2Q9Y320 296 aa18.06■□□□□ 0.48
VARS-223ENST00000474643 CEP290O15078 2479 aa18.06■□□□□ 0.48
VARS-223ENST00000474643 WDR46O15213 610 aaKnown RBP18.05■□□□□ 0.48
VARS-223ENST00000474643 NUCB1Q02818 461 aa18.05■□□□□ 0.48
VARS-223ENST00000474643 CACNB2Q08289 660 aaPredicted RBP18.05■□□□□ 0.48
VARS-223ENST00000474643 C7orf61Q8IZ16 206 aa18.05■□□□□ 0.48
VARS-223ENST00000474643 PI4K2BQ8TCG2 481 aa18.05■□□□□ 0.48
VARS-223ENST00000474643 DIS3LQ8TF46 1054 aaKnown RBP18.05■□□□□ 0.48
VARS-223ENST00000474643 SPATC1LQ9H0A9 340 aa18.05■□□□□ 0.48
VARS-223ENST00000474643 PCDH10Q9P2E7 1040 aa18.05■□□□□ 0.48
VARS-223ENST00000474643 CTDP1Q9Y5B0 961 aaPredicted RBP18.05■□□□□ 0.48
VARS-223ENST00000474643 GPAA1O43292 621 aa18.04■□□□□ 0.48
VARS-223ENST00000474643 EEF2P13639 858 aaKnown RBP18.04■□□□□ 0.48
VARS-223ENST00000474643 PDE1AP54750 535 aa18.04■□□□□ 0.48
VARS-223ENST00000474643 GIMAP6Q6P9H5 292 aa18.04■□□□□ 0.48
VARS-223ENST00000474643 USP6NLQ92738 828 aa18.04■□□□□ 0.48
VARS-223ENST00000474643 STRBPQ96SI9 672 aaKnown RBP18.04■□□□□ 0.48
VARS-223ENST00000474643 MOV10L1Q9BXT6 1211 aaKnown RBP18.04■□□□□ 0.48
VARS-223ENST00000474643 ISY1Q9ULR0 285 aaKnown RBP18.04■□□□□ 0.48
VARS-223ENST00000474643 PLXNB2O15031 1838 aa18.03■□□□□ 0.48
VARS-223ENST00000474643 SLC3A2P08195 630 aaKnown RBP18.03■□□□□ 0.48
VARS-223ENST00000474643 CCND3P30281 292 aaPredicted RBP18.03■□□□□ 0.48
VARS-223ENST00000474643 DSG3P32926 999 aa18.03■□□□□ 0.48
VARS-223ENST00000474643 GRB14Q14449 540 aa18.03■□□□□ 0.48
VARS-223ENST00000474643 MAP3K21Q5TCX8 1036 aa18.03■□□□□ 0.48
VARS-223ENST00000474643 ATG4CQ96DT6 458 aa18.03■□□□□ 0.48
VARS-223ENST00000474643 MROH8Q9H579 483 aa18.03■□□□□ 0.48
VARS-223ENST00000474643 SALL3Q9BXA9 1300 aa18.02■□□□□ 0.48
VARS-223ENST00000474643 TRIM6-TRIM34B2RNG4 842 aa18.02■□□□□ 0.48
VARS-223ENST00000474643 STRNO43815 780 aa18.02■□□□□ 0.48
VARS-223ENST00000474643 ERCC3P19447 782 aa18.02■□□□□ 0.48
VARS-223ENST00000474643 ADORA2AP29274 412 aa18.02■□□□□ 0.48
VARS-223ENST00000474643 ZNF444Q8N0Y2 327 aaPredicted RBP18.02■□□□□ 0.48
VARS-223ENST00000474643 OSBP2Q969R2 916 aa18.02■□□□□ 0.48
VARS-223ENST00000474643 STAP2Q9UGK3 403 aa18.02■□□□□ 0.48
VARS-223ENST00000474643 OGDHLQ9ULD0 1010 aa18.02■□□□□ 0.48
VARS-223ENST00000474643 GSG1L2A8MUP6 293 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms