RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 CRNKL1Q9BZJ0 848 aaKnown RBP10.63□□□□□ -0.71
TNFRSF9-202ENST00000474475 BOLA2Q9H3K6 86 aa10.63□□□□□ -0.71
TNFRSF9-202ENST00000474475 CHMP4BQ9H444 224 aaKnown RBP10.63□□□□□ -0.71
TNFRSF9-202ENST00000474475 PAK6Q9NQU5 681 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF9-202ENST00000474475 PAG1Q9NWQ8 432 aa10.63□□□□□ -0.71
TNFRSF9-202ENST00000474475 CENPFP49454 3210 aa10.63□□□□□ -0.71
TNFRSF9-202ENST00000474475 FARP2O94887 1054 aaPredicted RBP10.62□□□□□ -0.71
TNFRSF9-202ENST00000474475 CHGBP05060 677 aa10.62□□□□□ -0.71
TNFRSF9-202ENST00000474475 POLR3DP05423 398 aaPredicted RBP10.62□□□□□ -0.71
TNFRSF9-202ENST00000474475 CYP2D6P10635 497 aa10.62□□□□□ -0.71
TNFRSF9-202ENST00000474475 GUCY1A2P33402 732 aa10.62□□□□□ -0.71
TNFRSF9-202ENST00000474475 TRIM32Q13049 653 aa10.62□□□□□ -0.71
TNFRSF9-202ENST00000474475 CAMK2BQ13554 666 aa10.62□□□□□ -0.71
TNFRSF9-202ENST00000474475 GPRC5AQ8NFJ5 357 aa10.62□□□□□ -0.71
TNFRSF9-202ENST00000474475 ACER1Q8TDN7 264 aa10.62□□□□□ -0.71
TNFRSF9-202ENST00000474475 FEZ1Q99689 392 aa10.62□□□□□ -0.71
TNFRSF9-202ENST00000474475 ARMT1Q9H993 441 aa10.62□□□□□ -0.71
TNFRSF9-202ENST00000474475 DCP1AQ9NPI6 582 aaPredicted RBP10.62□□□□□ -0.71
TNFRSF9-202ENST00000474475 MCM9Q9NXL9 1143 aa10.62□□□□□ -0.71
TNFRSF9-202ENST00000474475 PRKAB2O43741 272 aa10.61□□□□□ -0.71
TNFRSF9-202ENST00000474475 SMARCA5O60264 1052 aaPredicted RBP10.61□□□□□ -0.71
TNFRSF9-202ENST00000474475 HMGCRP04035 888 aa10.61□□□□□ -0.71
TNFRSF9-202ENST00000474475 CYP2B6P20813 491 aa10.61□□□□□ -0.71
TNFRSF9-202ENST00000474475 ADD2P35612 726 aa10.61□□□□□ -0.71
TNFRSF9-202ENST00000474475 ERVK-9P63128 1117 aa10.61□□□□□ -0.71
TNFRSF9-202ENST00000474475 ERVK-24P63145 666 aa10.61□□□□□ -0.71
TNFRSF9-202ENST00000474475 SEPT2Q15019 361 aa10.61□□□□□ -0.71
TNFRSF9-202ENST00000474475 TRIB2Q92519 343 aa10.61□□□□□ -0.71
TNFRSF9-202ENST00000474475 DPF3Q92784 378 aa10.61□□□□□ -0.71
TNFRSF9-202ENST00000474475 HAUS7Q99871 368 aa10.61□□□□□ -0.71
TNFRSF9-202ENST00000474475 PAGR1Q9BTK6 254 aa10.61□□□□□ -0.71
TNFRSF9-202ENST00000474475 LRRCC1Q9C099 1032 aa10.61□□□□□ -0.71
TNFRSF9-202ENST00000474475 KIAA1683Q9H0B3 1180 aa10.61□□□□□ -0.71
TNFRSF9-202ENST00000474475 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.61□□□□□ -0.71
TNFRSF9-202ENST00000474475 PORCNQ9H237 461 aa10.61□□□□□ -0.71
TNFRSF9-202ENST00000474475 CABP5Q9NP86 173 aa10.61□□□□□ -0.71
TNFRSF9-202ENST00000474475 BRCA2P51587 3418 aa10.61□□□□□ -0.71
TNFRSF9-202ENST00000474475 A0A1W2PRG0 241 aa10.6□□□□□ -0.71
TNFRSF9-202ENST00000474475 USP17L15C9J2P7 530 aa10.6□□□□□ -0.71
TNFRSF9-202ENST00000474475 USP17L13C9JLJ4 530 aa10.6□□□□□ -0.71
TNFRSF9-202ENST00000474475 USP17L11C9JVI0 530 aa10.6□□□□□ -0.71
TNFRSF9-202ENST00000474475 USP17L18D6R9N7 530 aa10.6□□□□□ -0.71
TNFRSF9-202ENST00000474475 USP17L22D6RA61 530 aa10.6□□□□□ -0.71
TNFRSF9-202ENST00000474475 USP17L17D6RBQ6 530 aa10.6□□□□□ -0.71
TNFRSF9-202ENST00000474475 USP17L19D6RCP7 530 aa10.6□□□□□ -0.71
TNFRSF9-202ENST00000474475 USP17L20D6RJB6 530 aa10.6□□□□□ -0.71
TNFRSF9-202ENST00000474475 SMIM22K7EJ46 135 aa10.6□□□□□ -0.71
TNFRSF9-202ENST00000474475 CNMDO75829 334 aa10.6□□□□□ -0.71
TNFRSF9-202ENST00000474475 MBD4O95243 580 aa10.6□□□□□ -0.71
TNFRSF9-202ENST00000474475 TFRCP02786 760 aaKnown RBP10.6□□□□□ -0.71
TNFRSF9-202ENST00000474475 VCAM1P19320 739 aa10.6□□□□□ -0.71
TNFRSF9-202ENST00000474475 MAPK4P31152 587 aa10.6□□□□□ -0.71
TNFRSF9-202ENST00000474475 USP14P54578 494 aa10.6□□□□□ -0.71
TNFRSF9-202ENST00000474475 USP17L24Q0WX57 530 aa10.6□□□□□ -0.71
TNFRSF9-202ENST00000474475 CATSPERGQ6ZRH7 1159 aa10.6□□□□□ -0.71
TNFRSF9-202ENST00000474475 SLC44A5Q8NCS7 719 aa10.6□□□□□ -0.71
TNFRSF9-202ENST00000474475 GTF3C2Q8WUA4 911 aaPredicted RBP10.6□□□□□ -0.71
TNFRSF9-202ENST00000474475 HTATIP2Q9BUP3 242 aa10.6□□□□□ -0.71
TNFRSF9-202ENST00000474475 MYH7P12883 1935 aa10.6□□□□□ -0.71
TNFRSF9-202ENST00000474475 RPTORQ8N122 1335 aa10.59□□□□□ -0.71
TNFRSF9-202ENST00000474475 BAZ2AQ9UIF9 1905 aaKnown RBP10.59□□□□□ -0.71
TNFRSF9-202ENST00000474475 XRCC5P13010 732 aaKnown RBP10.59□□□□□ -0.71
TNFRSF9-202ENST00000474475 UBE3CQ15386 1083 aa10.59□□□□□ -0.71
TNFRSF9-202ENST00000474475 MAP3K21Q5TCX8 1036 aa10.59□□□□□ -0.71
TNFRSF9-202ENST00000474475 GPR142Q7Z601 462 aa10.59□□□□□ -0.71
TNFRSF9-202ENST00000474475 DIS3LQ8TF46 1054 aaKnown RBP10.59□□□□□ -0.71
TNFRSF9-202ENST00000474475 SOCS4Q8WXH5 440 aa10.59□□□□□ -0.71
TNFRSF9-202ENST00000474475 USP6NLQ92738 828 aa10.59□□□□□ -0.71
TNFRSF9-202ENST00000474475 DYNLL2Q96FJ2 89 aa10.59□□□□□ -0.71
TNFRSF9-202ENST00000474475 NUDT12Q9BQG2 462 aa10.59□□□□□ -0.71
TNFRSF9-202ENST00000474475 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.59□□□□□ -0.71
TNFRSF9-202ENST00000474475 RPAP3Q9H6T3 665 aaPredicted RBP10.59□□□□□ -0.71
TNFRSF9-202ENST00000474475 RABGAP1Q9Y3P9 1069 aa10.59□□□□□ -0.71
TNFRSF9-202ENST00000474475 MYH8P13535 1937 aa10.58□□□□□ -0.72
TNFRSF9-202ENST00000474475 CYP2D7A0A087X1C5 515 aa10.58□□□□□ -0.72
TNFRSF9-202ENST00000474475 SPDYE16A6NNV3 312 aaPredicted RBP10.58□□□□□ -0.72
TNFRSF9-202ENST00000474475 MPHOSPH10O00566 681 aaKnown RBP10.58□□□□□ -0.72
TNFRSF9-202ENST00000474475 AKR1B1P15121 316 aa10.58□□□□□ -0.72
TNFRSF9-202ENST00000474475 CAPN2P17655 700 aa10.58□□□□□ -0.72
TNFRSF9-202ENST00000474475 MORN1Q5T089 497 aa10.58□□□□□ -0.72
TNFRSF9-202ENST00000474475 LBX2Q6XYB7 198 aa10.58□□□□□ -0.72
TNFRSF9-202ENST00000474475 PLEKHH3Q7Z736 793 aa10.58□□□□□ -0.72
TNFRSF9-202ENST00000474475 CLEC10AQ8IUN9 316 aa10.58□□□□□ -0.72
TNFRSF9-202ENST00000474475 SIAH1Q8IUQ4 282 aa10.58□□□□□ -0.72
TNFRSF9-202ENST00000474475 PAWRQ96IZ0 340 aaKnown RBP10.58□□□□□ -0.72
TNFRSF9-202ENST00000474475 DCTPP1Q9H773 170 aa10.58□□□□□ -0.72
TNFRSF9-202ENST00000474475 HMX1Q9NP08 348 aaPredicted RBP10.58□□□□□ -0.72
TNFRSF9-202ENST00000474475 ATP8A2Q9NTI2 1148 aa10.58□□□□□ -0.72
TNFRSF9-202ENST00000474475 ECHDC1Q9NTX5 307 aa10.58□□□□□ -0.72
TNFRSF9-202ENST00000474475 BTBD7Q9P203 1132 aa10.58□□□□□ -0.72
TNFRSF9-202ENST00000474475 SWAP70Q9UH65 585 aa10.58□□□□□ -0.72
TNFRSF9-202ENST00000474475 ARIH1Q9Y4X5 557 aaPredicted RBP10.58□□□□□ -0.72
TNFRSF9-202ENST00000474475 MKI67P46013 3256 aaKnown RBP10.57□□□□□ -0.72
TNFRSF9-202ENST00000474475 RLFQ13129 1914 aa10.57□□□□□ -0.72
TNFRSF9-202ENST00000474475 ALPK3Q96L96 1907 aa10.57□□□□□ -0.72
TNFRSF9-202ENST00000474475 USP17L12C9JPN9 530 aa10.57□□□□□ -0.72
TNFRSF9-202ENST00000474475 USP17L21D6R901 530 aa10.57□□□□□ -0.72
TNFRSF9-202ENST00000474475 RGS2P41220 211 aa10.57□□□□□ -0.72
TNFRSF9-202ENST00000474475 FXR1P51114 621 aaKnown RBP eCLIP10.57□□□□□ -0.72
TNFRSF9-202ENST00000474475 CCL14Q16627 93 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms