RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 TOMM22Q9NS69 142 aa12.22□□□□□ -0.45
CASC3-204ENST00000474190 CLIP2Q9UDT6 1046 aa12.22□□□□□ -0.45
CASC3-204ENST00000474190 BRPF3Q9ULD4 1205 aa12.22□□□□□ -0.45
CASC3-204ENST00000474190 PHIPQ8WWQ0 1821 aa12.22□□□□□ -0.45
CASC3-204ENST00000474190 IGF2BP3O00425 579 aaKnown RBP eCLIP12.21□□□□□ -0.45
CASC3-204ENST00000474190 CD2BP2O95400 341 aaKnown RBP12.21□□□□□ -0.45
CASC3-204ENST00000474190 TTLL1O95922 423 aa12.21□□□□□ -0.45
CASC3-204ENST00000474190 CASTP20810 708 aaKnown RBP12.21□□□□□ -0.45
CASC3-204ENST00000474190 EVCP57679 992 aa12.21□□□□□ -0.45
CASC3-204ENST00000474190 MKRN3Q13064 507 aaKnown RBP12.21□□□□□ -0.45
CASC3-204ENST00000474190 TREML2Q5T2D2 321 aa12.21□□□□□ -0.45
CASC3-204ENST00000474190 RUFY3Q7L099 469 aa12.21□□□□□ -0.45
CASC3-204ENST00000474190 SGMS1Q86VZ5 419 aa12.21□□□□□ -0.45
CASC3-204ENST00000474190 LRRC47Q8N1G4 583 aaKnown RBP12.21□□□□□ -0.45
CASC3-204ENST00000474190 CAPNS2Q96L46 248 aa12.21□□□□□ -0.45
CASC3-204ENST00000474190 MTA3Q9BTC8 594 aa12.21□□□□□ -0.45
CASC3-204ENST00000474190 CABP5Q9NP86 173 aa12.21□□□□□ -0.45
CASC3-204ENST00000474190 DOCK1Q14185 1865 aa12.21□□□□□ -0.46
CASC3-204ENST00000474190 USP17L10C9JJH3 530 aa12.2□□□□□ -0.46
CASC3-204ENST00000474190 NDUFB10O96000 172 aa12.2□□□□□ -0.46
CASC3-204ENST00000474190 MCM5P33992 734 aa12.2□□□□□ -0.46
CASC3-204ENST00000474190 LIFRP42702 1097 aa12.2□□□□□ -0.46
CASC3-204ENST00000474190 HMGCS2P54868 508 aa12.2□□□□□ -0.46
CASC3-204ENST00000474190 TROAPQ12815 778 aa12.2□□□□□ -0.46
CASC3-204ENST00000474190 RALYLQ86SE5 291 aaKnown RBP12.2□□□□□ -0.46
CASC3-204ENST00000474190 GMCL1P1Q8NEA9 526 aa12.2□□□□□ -0.46
CASC3-204ENST00000474190 CCDC102AQ96A19 550 aa12.2□□□□□ -0.46
CASC3-204ENST00000474190 TBC1D2Q9BYX2 928 aa12.2□□□□□ -0.46
CASC3-204ENST00000474190 ALDH8A1Q9H2A2 487 aaPredicted RBP12.2□□□□□ -0.46
CASC3-204ENST00000474190 VCPKMTQ9H867 229 aa12.2□□□□□ -0.46
CASC3-204ENST00000474190 FAM217BQ9NTX9 383 aaPredicted RBP12.2□□□□□ -0.46
CASC3-204ENST00000474190 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.2□□□□□ -0.46
CASC3-204ENST00000474190 SYNPO2Q9UMS6 1093 aa12.2□□□□□ -0.46
CASC3-204ENST00000474190 HPS5Q9UPZ3 1129 aa12.2□□□□□ -0.46
CASC3-204ENST00000474190 WDR33Q9C0J8 1336 aaKnown RBP12.19□□□□□ -0.46
CASC3-204ENST00000474190 BTBD19C9JJ37 291 aa12.19□□□□□ -0.46
CASC3-204ENST00000474190 F5H6K3 240 aa12.19□□□□□ -0.46
CASC3-204ENST00000474190 IFIT3O14879 490 aaKnown RBP12.19□□□□□ -0.46
CASC3-204ENST00000474190 TOP1P11387 765 aaKnown RBP12.19□□□□□ -0.46
CASC3-204ENST00000474190 VCAM1P19320 739 aa12.19□□□□□ -0.46
CASC3-204ENST00000474190 TM4SF4P48230 202 aa12.19□□□□□ -0.46
CASC3-204ENST00000474190 KIF23Q02241 960 aaPredicted RBP12.19□□□□□ -0.46
CASC3-204ENST00000474190 KLRC3Q07444 240 aa12.19□□□□□ -0.46
CASC3-204ENST00000474190 ST3GAL1Q11201 340 aa12.19□□□□□ -0.46
CASC3-204ENST00000474190 TRDNQ13061 729 aa12.19□□□□□ -0.46
CASC3-204ENST00000474190 BLOC1S2Q6QNY1 142 aa12.19□□□□□ -0.46
CASC3-204ENST00000474190 FAM43AQ8N2R8 423 aa12.19□□□□□ -0.46
CASC3-204ENST00000474190 TMEM87BQ96K49 555 aa12.19□□□□□ -0.46
CASC3-204ENST00000474190 NUP88Q99567 741 aaPredicted RBP12.19□□□□□ -0.46
CASC3-204ENST00000474190 STX8Q9UNK0 236 aa12.19□□□□□ -0.46
CASC3-204ENST00000474190 C19orf81C9J6K1 198 aa12.18□□□□□ -0.46
CASC3-204ENST00000474190 EIF5BO60841 1220 aaKnown RBP12.18□□□□□ -0.46
CASC3-204ENST00000474190 HMGB1P09429 215 aaKnown RBP12.18□□□□□ -0.46
CASC3-204ENST00000474190 PDHBP11177 359 aa12.18□□□□□ -0.46
CASC3-204ENST00000474190 MCCP23508 829 aa12.18□□□□□ -0.46
CASC3-204ENST00000474190 PSMA5P28066 241 aa12.18□□□□□ -0.46
CASC3-204ENST00000474190 SNAPC2Q13487 334 aa12.18□□□□□ -0.46
CASC3-204ENST00000474190 ZYXQ15942 572 aaKnown RBP12.18□□□□□ -0.46
CASC3-204ENST00000474190 TMEM67Q5HYA8 995 aa12.18□□□□□ -0.46
CASC3-204ENST00000474190 Q6ZUG5 572 aa12.18□□□□□ -0.46
CASC3-204ENST00000474190 IQCA1Q86XH1 822 aa12.18□□□□□ -0.46
CASC3-204ENST00000474190 SPICE1Q8N0Z3 855 aa12.18□□□□□ -0.46
CASC3-204ENST00000474190 GMCL1Q96IK5 515 aa12.18□□□□□ -0.46
CASC3-204ENST00000474190 LARP6Q9BRS8 491 aaKnown RBP12.18□□□□□ -0.46
CASC3-204ENST00000474190 ADGRA2Q96PE1 1338 aa12.17□□□□□ -0.46
CASC3-204ENST00000474190 LARGE1O95461 756 aa12.17□□□□□ -0.46
CASC3-204ENST00000474190 HOXA7P31268 230 aaPredicted RBP12.17□□□□□ -0.46
CASC3-204ENST00000474190 GTF2A2P52657 109 aa12.17□□□□□ -0.46
CASC3-204ENST00000474190 AK2P54819 239 aa12.17□□□□□ -0.46
CASC3-204ENST00000474190 MAP2K1Q02750 393 aaPredicted RBP12.17□□□□□ -0.46
CASC3-204ENST00000474190 FUT2Q10981 343 aa12.17□□□□□ -0.46
CASC3-204ENST00000474190 USP17L2Q6R6M4 530 aa12.17□□□□□ -0.46
CASC3-204ENST00000474190 NBPF11Q86T75 865 aa12.17□□□□□ -0.46
CASC3-204ENST00000474190 STAG2Q8N3U4 1231 aa12.17□□□□□ -0.46
CASC3-204ENST00000474190 PROCA1Q8NCQ7 364 aaPredicted RBP12.17□□□□□ -0.46
CASC3-204ENST00000474190 PNMA1Q8ND90 353 aa12.17□□□□□ -0.46
CASC3-204ENST00000474190 BRF1Q92994 677 aa12.17□□□□□ -0.46
CASC3-204ENST00000474190 UBAC1Q9BSL1 405 aa12.17□□□□□ -0.46
CASC3-204ENST00000474190 MYL10Q9BUA6 226 aa12.17□□□□□ -0.46
CASC3-204ENST00000474190 R3HDMLQ9H3Y0 253 aa12.17□□□□□ -0.46
CASC3-204ENST00000474190 AS3MTQ9HBK9 375 aa12.17□□□□□ -0.46
CASC3-204ENST00000474190 MAD2L2Q9UI95 211 aa12.17□□□□□ -0.46
CASC3-204ENST00000474190 CYP46A1Q9Y6A2 500 aa12.17□□□□□ -0.46
CASC3-204ENST00000474190 NID2Q14112 1375 aa12.17□□□□□ -0.46
CASC3-204ENST00000474190 CCL15-CCL14A0A0B4J2E2 113 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 CETPP11597 493 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 ATP2B2Q01814 1243 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 APOBRQ0VD83 1088 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 NOGQ13253 232 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 WTAPQ15007 396 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 CCL15Q16663 113 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 CCDC178Q5BJE1 867 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 FAM83BQ5T0W9 1011 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 IFIT1BQ5T764 474 aaKnown RBP12.16□□□□□ -0.46
CASC3-204ENST00000474190 SLFN13Q68D06 897 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 TTBK2Q6IQ55 1244 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 APOA5Q6Q788 366 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 CATSPERGQ6ZRH7 1159 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 ANKRD23Q86SG2 305 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 RAB11FIP4Q86YS3 637 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms