RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.82■■□□□ 1.4
TMEM54-204ENST00000474144 TANGO6Q9C0B7 1094 aa23.82■■□□□ 1.4
TMEM54-204ENST00000474144 RLFQ13129 1914 aa23.82■■□□□ 1.4
TMEM54-204ENST00000474144 PATL2C9JE40 543 aaKnown RBP23.81■■□□□ 1.4
TMEM54-204ENST00000474144 SGPL1O95470 568 aa23.81■■□□□ 1.4
TMEM54-204ENST00000474144 GNAT2P19087 354 aa23.81■■□□□ 1.4
TMEM54-204ENST00000474144 RASA1P20936 1047 aa23.81■■□□□ 1.4
TMEM54-204ENST00000474144 TDO2P48775 406 aa23.81■■□□□ 1.4
TMEM54-204ENST00000474144 ATP2B2Q01814 1243 aa23.81■■□□□ 1.4
TMEM54-204ENST00000474144 LRRFIP1Q32MZ4 808 aaKnown RBP23.81■■□□□ 1.4
TMEM54-204ENST00000474144 ZMYM1Q5SVZ6 1142 aa23.81■■□□□ 1.4
TMEM54-204ENST00000474144 PLEKHH3Q7Z736 793 aa23.81■■□□□ 1.4
TMEM54-204ENST00000474144 CCAR1Q8IX12 1150 aaKnown RBP23.81■■□□□ 1.4
TMEM54-204ENST00000474144 STAP2Q9UGK3 403 aa23.81■■□□□ 1.4
TMEM54-204ENST00000474144 ROBO3Q96MS0 1386 aa23.8■■□□□ 1.4
TMEM54-204ENST00000474144 IGHDP01880 384 aa23.8■■□□□ 1.4
TMEM54-204ENST00000474144 HMGCRP04035 888 aa23.8■■□□□ 1.4
TMEM54-204ENST00000474144 PDE1AP54750 535 aa23.8■■□□□ 1.4
TMEM54-204ENST00000474144 MORN1Q5T089 497 aa23.8■■□□□ 1.4
TMEM54-204ENST00000474144 IFNL3Q8IZI9 196 aa23.8■■□□□ 1.4
TMEM54-204ENST00000474144 USP6NLQ92738 828 aa23.8■■□□□ 1.4
TMEM54-204ENST00000474144 DEFB118Q96PH6 123 aa23.8■■□□□ 1.4
TMEM54-204ENST00000474144 LNPKQ9C0E8 428 aa23.8■■□□□ 1.4
TMEM54-204ENST00000474144 VCPKMTQ9H867 229 aa23.8■■□□□ 1.4
TMEM54-204ENST00000474144 PAK6Q9NQU5 681 aaPredicted RBP23.8■■□□□ 1.4
TMEM54-204ENST00000474144 GREB1LQ9C091 1923 aaPredicted RBP23.8■■□□□ 1.4
TMEM54-204ENST00000474144 COG2Q14746 738 aa23.79■■□□□ 1.4
TMEM54-204ENST00000474144 B4GALNT3Q6L9W6 998 aa23.79■■□□□ 1.4
TMEM54-204ENST00000474144 CCDC129Q6ZRS4 1044 aa23.79■■□□□ 1.4
TMEM54-204ENST00000474144 SOCS4Q8WXH5 440 aa23.79■■□□□ 1.4
TMEM54-204ENST00000474144 LPAR1Q92633 364 aa23.79■■□□□ 1.4
TMEM54-204ENST00000474144 KANSL2Q9H9L4 492 aa23.79■■□□□ 1.4
TMEM54-204ENST00000474144 MKNK2Q9HBH9 465 aa23.79■■□□□ 1.4
TMEM54-204ENST00000474144 PRDM1O75626 825 aa23.78■■□□□ 1.4
TMEM54-204ENST00000474144 CCNA1P78396 465 aa23.78■■□□□ 1.4
TMEM54-204ENST00000474144 AAMPQ13685 434 aa23.78■■□□□ 1.4
TMEM54-204ENST00000474144 WDR78Q5VTH9 848 aa23.78■■□□□ 1.4
TMEM54-204ENST00000474144 UBE2Q1Q7Z7E8 422 aa23.78■■□□□ 1.4
TMEM54-204ENST00000474144 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.78■■□□□ 1.4
TMEM54-204ENST00000474144 SH2D4AQ9H788 454 aa23.78■■□□□ 1.4
TMEM54-204ENST00000474144 CWC22Q9HCG8 908 aaKnown RBP23.78■■□□□ 1.4
TMEM54-204ENST00000474144 HOXC10Q9NYD6 342 aa23.78■■□□□ 1.4
TMEM54-204ENST00000474144 A0A0G2JMZ2 1700 aa23.77■■□□□ 1.4
TMEM54-204ENST00000474144 XRCC5P13010 732 aaKnown RBP23.77■■□□□ 1.4
TMEM54-204ENST00000474144 CCL14Q16627 93 aa23.77■■□□□ 1.4
TMEM54-204ENST00000474144 EVI5LQ96CN4 794 aa23.77■■□□□ 1.4
TMEM54-204ENST00000474144 RWDD1Q9H446 243 aaPredicted RBP23.77■■□□□ 1.4
TMEM54-204ENST00000474144 SUPT16HQ9Y5B9 1047 aaKnown RBP23.77■■□□□ 1.4
TMEM54-204ENST00000474144 PARP14Q460N5 1801 aa23.77■■□□□ 1.4
TMEM54-204ENST00000474144 FOXP2O15409 715 aa23.76■■□□□ 1.39
TMEM54-204ENST00000474144 FLOT1O75955 427 aa23.76■■□□□ 1.39
TMEM54-204ENST00000474144 TFRCP02786 760 aaKnown RBP23.76■■□□□ 1.39
TMEM54-204ENST00000474144 DSG3P32926 999 aa23.76■■□□□ 1.39
TMEM54-204ENST00000474144 SAMD1Q6SPF0 538 aaPredicted RBP23.76■■□□□ 1.39
TMEM54-204ENST00000474144 SMC5Q8IY18 1101 aa23.76■■□□□ 1.39
TMEM54-204ENST00000474144 ATG4CQ96DT6 458 aa23.76■■□□□ 1.39
TMEM54-204ENST00000474144 WDR46O15213 610 aaKnown RBP23.75■■□□□ 1.39
TMEM54-204ENST00000474144 RAD21O60216 631 aa23.75■■□□□ 1.39
TMEM54-204ENST00000474144 PTPREP23469 700 aa23.75■■□□□ 1.39
TMEM54-204ENST00000474144 RGS2P41220 211 aa23.75■■□□□ 1.39
TMEM54-204ENST00000474144 MAP2K5Q13163 448 aa23.75■■□□□ 1.39
TMEM54-204ENST00000474144 MOV10L1Q9BXT6 1211 aaKnown RBP23.75■■□□□ 1.39
TMEM54-204ENST00000474144 NACAP1Q9BZK3 213 aa23.75■■□□□ 1.39
TMEM54-204ENST00000474144 HMX1Q9NP08 348 aaPredicted RBP23.75■■□□□ 1.39
TMEM54-204ENST00000474144 RPTORQ8N122 1335 aa23.75■■□□□ 1.39
TMEM54-204ENST00000474144 FARP2O94887 1054 aaPredicted RBP23.74■■□□□ 1.39
TMEM54-204ENST00000474144 PRKAR2AP13861 404 aaKnown RBP23.74■■□□□ 1.39
TMEM54-204ENST00000474144 ZKSCAN1P17029 563 aaPredicted RBP23.74■■□□□ 1.39
TMEM54-204ENST00000474144 APBA2Q99767 749 aa23.74■■□□□ 1.39
TMEM54-204ENST00000474144 CRISPLD2Q9H0B8 497 aa23.74■■□□□ 1.39
TMEM54-204ENST00000474144 NAPBQ9H115 298 aa23.74■■□□□ 1.39
TMEM54-204ENST00000474144 MAP3K21Q5TCX8 1036 aa23.73■■□□□ 1.39
TMEM54-204ENST00000474144 VPS53Q5VIR6 699 aa23.73■■□□□ 1.39
TMEM54-204ENST00000474144 ZNF444Q8N0Y2 327 aaPredicted RBP23.73■■□□□ 1.39
TMEM54-204ENST00000474144 SPATC1LQ9H0A9 340 aa23.73■■□□□ 1.39
TMEM54-204ENST00000474144 GOPCQ9HD26 462 aa23.73■■□□□ 1.39
TMEM54-204ENST00000474144 FBXO28Q9NVF7 368 aa23.73■■□□□ 1.39
TMEM54-204ENST00000474144 FLRT1Q9NZU1 646 aa23.73■■□□□ 1.39
TMEM54-204ENST00000474144 IGKV6D-41A0A0C4DH26 115 aa23.72■■□□□ 1.39
TMEM54-204ENST00000474144 SLC15A5A6NIM6 579 aa23.72■■□□□ 1.39
TMEM54-204ENST00000474144 PPARAQ07869 468 aa23.72■■□□□ 1.39
TMEM54-204ENST00000474144 CACNB2Q08289 660 aaPredicted RBP23.72■■□□□ 1.39
TMEM54-204ENST00000474144 GRB14Q14449 540 aa23.72■■□□□ 1.39
TMEM54-204ENST00000474144 FAM83BQ5T0W9 1011 aa23.72■■□□□ 1.39
TMEM54-204ENST00000474144 FAM227BQ96M60 508 aa23.72■■□□□ 1.39
TMEM54-204ENST00000474144 NYAP2Q9P242 653 aa23.72■■□□□ 1.39
TMEM54-204ENST00000474144 COL11A1P12107 1806 aaPredicted RBP23.72■■□□□ 1.39
TMEM54-204ENST00000474144 ERCC3P19447 782 aa23.71■■□□□ 1.39
TMEM54-204ENST00000474144 PLS1Q14651 629 aa23.71■■□□□ 1.39
TMEM54-204ENST00000474144 FAM47AQ5JRC9 791 aa23.71■■□□□ 1.39
TMEM54-204ENST00000474144 CHD1LQ86WJ1 897 aa23.71■■□□□ 1.39
TMEM54-204ENST00000474144 NPLOC4Q8TAT6 608 aa23.71■■□□□ 1.39
TMEM54-204ENST00000474144 DIS3LQ8TF46 1054 aaKnown RBP23.71■■□□□ 1.39
TMEM54-204ENST00000474144 DPF3Q92784 378 aa23.71■■□□□ 1.39
TMEM54-204ENST00000474144 NUP88Q99567 741 aaPredicted RBP23.71■■□□□ 1.39
TMEM54-204ENST00000474144 CLIP2Q9UDT6 1046 aa23.71■■□□□ 1.39
TMEM54-204ENST00000474144 IVNS1ABPQ9Y6Y0 642 aa23.71■■□□□ 1.39
TMEM54-204ENST00000474144 MYH4Q9Y623 1939 aa23.71■■□□□ 1.39
TMEM54-204ENST00000474144 CCND3P30281 292 aaPredicted RBP23.7■■□□□ 1.38
TMEM54-204ENST00000474144 NUCB1Q02818 461 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms