RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 SH3RF1Q7Z6J0 888 aa24.57■■□□□ 1.52
APP-215ENST00000474136 FRAT1Q92837 279 aaPredicted RBP24.57■■□□□ 1.52
APP-215ENST00000474136 DBNLQ9UJU6 430 aaKnown RBP24.57■■□□□ 1.52
APP-215ENST00000474136 KBTBD13C9JR72 458 aa24.56■■□□□ 1.52
APP-215ENST00000474136 PLCD1P51178 756 aa24.56■■□□□ 1.52
APP-215ENST00000474136 PRAMEF19Q5SWL8 479 aa24.56■■□□□ 1.52
APP-215ENST00000474136 OLFML2BQ68BL8 750 aa24.56■■□□□ 1.52
APP-215ENST00000474136 MAGEB6Q8N7X4 407 aa24.56■■□□□ 1.52
APP-215ENST00000474136 CABP5Q9NP86 173 aa24.56■■□□□ 1.52
APP-215ENST00000474136 PDLIM7Q9NR12 457 aa24.56■■□□□ 1.52
APP-215ENST00000474136 CDH23Q9H251 3354 aa24.56■■□□□ 1.52
APP-215ENST00000474136 TRIM43BA6NCK2 446 aa24.55■■□□□ 1.52
APP-215ENST00000474136 COBLO75128 1261 aa24.55■■□□□ 1.52
APP-215ENST00000474136 ADCYAP1R1P41586 468 aa24.55■■□□□ 1.52
APP-215ENST00000474136 SEPT2Q15019 361 aa24.55■■□□□ 1.52
APP-215ENST00000474136 FERMT2Q96AC1 680 aa24.55■■□□□ 1.52
APP-215ENST00000474136 TRIM43Q96BQ3 446 aaPredicted RBP24.55■■□□□ 1.52
APP-215ENST00000474136 CCDC8Q9H0W5 538 aaPredicted RBP24.55■■□□□ 1.52
APP-215ENST00000474136 SEPT4O43236 478 aa24.54■■□□□ 1.52
APP-215ENST00000474136 SURF6O75683 361 aaKnown RBP24.54■■□□□ 1.52
APP-215ENST00000474136 MYH1P12882 1939 aa24.54■■□□□ 1.52
APP-215ENST00000474136 RLFQ13129 1914 aa24.54■■□□□ 1.52
APP-215ENST00000474136 SNX17Q15036 470 aa24.54■■□□□ 1.52
APP-215ENST00000474136 TTC6Q86TZ1 520 aa24.54■■□□□ 1.52
APP-215ENST00000474136 A0A1W2PRG0 241 aa24.53■■□□□ 1.52
APP-215ENST00000474136 IGSF3O75054 1194 aa24.53■■□□□ 1.52
APP-215ENST00000474136 ERCC3P19447 782 aa24.53■■□□□ 1.52
APP-215ENST00000474136 SMAD3P84022 425 aaKnown RBP24.53■■□□□ 1.52
APP-215ENST00000474136 EVX2Q03828 476 aa24.53■■□□□ 1.52
APP-215ENST00000474136 SSH3Q8TE77 659 aa24.53■■□□□ 1.52
APP-215ENST00000474136 SPATC1LQ9H0A9 340 aa24.53■■□□□ 1.52
APP-215ENST00000474136 ANTXR1Q9H6X2 564 aa24.53■■□□□ 1.52
APP-215ENST00000474136 COG2Q14746 738 aa24.52■■□□□ 1.52
APP-215ENST00000474136 LRRC41Q15345 812 aa24.52■■□□□ 1.52
APP-215ENST00000474136 STRNO43815 780 aa24.51■■□□□ 1.51
APP-215ENST00000474136 FOSL2P15408 326 aa24.51■■□□□ 1.51
APP-215ENST00000474136 ITGB8P26012 769 aa24.51■■□□□ 1.51
APP-215ENST00000474136 ATP8B2P98198 1209 aa24.51■■□□□ 1.51
APP-215ENST00000474136 FAM47AQ5JRC9 791 aa24.51■■□□□ 1.51
APP-215ENST00000474136 KIAA1755Q5JYT7 1200 aa24.51■■□□□ 1.51
APP-215ENST00000474136 EAF2Q96CJ1 260 aaPredicted RBP24.51■■□□□ 1.51
APP-215ENST00000474136 TANGO6Q9C0B7 1094 aa24.51■■□□□ 1.51
APP-215ENST00000474136 C1orf115Q9H7X2 142 aa24.51■■□□□ 1.51
APP-215ENST00000474136 PRDM6Q9NQX0 595 aa24.51■■□□□ 1.51
APP-215ENST00000474136 TLE2Q04725 743 aa24.5■■□□□ 1.51
APP-215ENST00000474136 CERS3Q8IU89 383 aa24.5■■□□□ 1.51
APP-215ENST00000474136 TMEM57Q8N5G2 664 aa24.5■■□□□ 1.51
APP-215ENST00000474136 HOXC10Q9NYD6 342 aa24.5■■□□□ 1.51
APP-215ENST00000474136 TTC28Q96AY4 2481 aa24.49■■□□□ 1.51
APP-215ENST00000474136 MPHOSPH10O00566 681 aaKnown RBP24.49■■□□□ 1.51
APP-215ENST00000474136 EPHB4P54760 987 aa24.49■■□□□ 1.51
APP-215ENST00000474136 GABPAQ06546 454 aa24.49■■□□□ 1.51
APP-215ENST00000474136 PLS1Q14651 629 aa24.49■■□□□ 1.51
APP-215ENST00000474136 SHCBP1Q8NEM2 672 aa24.49■■□□□ 1.51
APP-215ENST00000474136 RIOK1Q9BRS2 568 aaKnown RBP24.49■■□□□ 1.51
APP-215ENST00000474136 POLR3DP05423 398 aaPredicted RBP24.48■■□□□ 1.51
APP-215ENST00000474136 ERICH6BQ5W0A0 696 aa24.48■■□□□ 1.51
APP-215ENST00000474136 NCAPG2Q86XI2 1143 aa24.48■■□□□ 1.51
APP-215ENST00000474136 FTSJ3Q8IY81 847 aaKnown RBP24.48■■□□□ 1.51
APP-215ENST00000474136 ZNF236Q9UL36 1845 aa24.47■■□□□ 1.51
APP-215ENST00000474136 C1orf53Q5VUE5 145 aa24.47■■□□□ 1.51
APP-215ENST00000474136 MAML3Q96JK9 1138 aa24.47■■□□□ 1.51
APP-215ENST00000474136 NOP58Q9Y2X3 529 aaKnown RBP24.47■■□□□ 1.51
APP-215ENST00000474136 DSG3P32926 999 aa24.46■■□□□ 1.51
APP-215ENST00000474136 MAP3K12Q12852 859 aa24.46■■□□□ 1.51
APP-215ENST00000474136 ATG4CQ96DT6 458 aa24.46■■□□□ 1.51
APP-215ENST00000474136 RNPC3Q96LT9 517 aaKnown RBP24.46■■□□□ 1.51
APP-215ENST00000474136 SAMD1Q6SPF0 538 aaPredicted RBP24.45■■□□□ 1.5
APP-215ENST00000474136 CLEC10AQ8IUN9 316 aa24.45■■□□□ 1.5
APP-215ENST00000474136 SLC44A5Q8NCS7 719 aa24.45■■□□□ 1.5
APP-215ENST00000474136 MROH8Q9H579 483 aa24.45■■□□□ 1.5
APP-215ENST00000474136 SLC5A4Q9NY91 659 aa24.45■■□□□ 1.5
APP-215ENST00000474136 PHF24Q9UPV7 400 aa24.45■■□□□ 1.5
APP-215ENST00000474136 ABRAQ8N0Z2 381 aa24.44■■□□□ 1.5
APP-215ENST00000474136 SPICE1Q8N0Z3 855 aa24.44■■□□□ 1.5
APP-215ENST00000474136 USP38Q8NB14 1042 aa24.44■■□□□ 1.5
APP-215ENST00000474136 CHMP4BQ9H444 224 aaKnown RBP24.44■■□□□ 1.5
APP-215ENST00000474136 XPNPEP3Q9NQH7 507 aa24.44■■□□□ 1.5
APP-215ENST00000474136 MCM9Q9NXL9 1143 aa24.44■■□□□ 1.5
APP-215ENST00000474136 TACC3Q9Y6A5 838 aa24.44■■□□□ 1.5
APP-215ENST00000474136 MAGEB6P1A0A0J9YX57 407 aa24.43■■□□□ 1.5
APP-215ENST00000474136 FLOT1O75955 427 aa24.43■■□□□ 1.5
APP-215ENST00000474136 PGK1P00558 417 aa24.43■■□□□ 1.5
APP-215ENST00000474136 CLTBP09497 229 aa24.43■■□□□ 1.5
APP-215ENST00000474136 CYP2D6P10635 497 aa24.43■■□□□ 1.5
APP-215ENST00000474136 GRIN2CQ14957 1233 aa24.43■■□□□ 1.5
APP-215ENST00000474136 MB21D1Q8N884 522 aa24.43■■□□□ 1.5
APP-215ENST00000474136 A0A0G2JMZ2 1700 aa24.42■■□□□ 1.5
APP-215ENST00000474136 SIAH1Q8IUQ4 282 aa24.42■■□□□ 1.5
APP-215ENST00000474136 PQBP1O60828 265 aaKnown RBP24.41■■□□□ 1.5
APP-215ENST00000474136 PGK2P07205 417 aa24.41■■□□□ 1.5
APP-215ENST00000474136 RARBP10826 455 aa24.41■■□□□ 1.5
APP-215ENST00000474136 FCER1AP12319 257 aa24.41■■□□□ 1.5
APP-215ENST00000474136 TAL1P17542 331 aaPredicted RBP24.41■■□□□ 1.5
APP-215ENST00000474136 AAMPQ13685 434 aa24.41■■□□□ 1.5
APP-215ENST00000474136 SDR42E1Q8WUS8 393 aa24.41■■□□□ 1.5
APP-215ENST00000474136 LENG1Q96BZ8 264 aaPredicted RBP24.41■■□□□ 1.5
APP-215ENST00000474136 TMEM265A0A087WTH1 108 aa24.4■■□□□ 1.5
APP-215ENST00000474136 KIAA0355O15063 1070 aa24.4■■□□□ 1.5
APP-215ENST00000474136 RAG1P15918 1043 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms