RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 UBA5Q9GZZ9 404 aa7.19□□□□□ -1.26
CLK1-210ENST00000473565 ISY1Q9ULR0 285 aaKnown RBP7.19□□□□□ -1.26
CLK1-210ENST00000473565 PCDHB6Q9Y5E3 794 aa7.19□□□□□ -1.26
CLK1-210ENST00000473565 SIPA1L1O43166 1804 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 SNW1Q13573 536 aaKnown RBP7.18□□□□□ -1.26
CLK1-210ENST00000473565 PTPAQ15257 358 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 NPY5RQ15761 445 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 CC2D2BQ6DHV5 1058 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 CDAN1Q8IWY9 1227 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 SUPT20HQ8NEM7 779 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 FUCA2Q9BTY2 467 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 CLSTN2Q9H4D0 955 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 RTN4Q9NQC3 1192 aaKnown RBP7.18□□□□□ -1.26
CLK1-210ENST00000473565 TCP10L2B9ZVM9 353 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 RAD21O60216 631 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 GDF11O95390 407 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 SCG2P13521 617 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 KIF5BP33176 963 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 MAP3K11Q16584 847 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 AXDND1Q5T1B0 1012 aaPredicted RBP7.18□□□□□ -1.26
CLK1-210ENST00000473565 CCDC73Q6ZRK6 1079 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 ANKS1AQ92625 1134 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 PHF20Q9BVI0 1012 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 ZNF287Q9HBT7 754 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 TCP11L1Q9NUJ3 509 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 PIM2Q9P1W9 311 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 CLIP2Q9UDT6 1046 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 KLRF2D3W0D1 207 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 YEATS4O95619 227 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 POLD1P28340 1107 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 SLC39A14Q15043 492 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 PPP2R5BQ15173 497 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 ATL3Q6DD88 541 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 RTKN2Q8IZC4 609 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 ENGASEQ8NFI3 743 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 MRPS27Q92552 414 aaKnown RBP7.18□□□□□ -1.26
CLK1-210ENST00000473565 DDX19AQ9NUU7 478 aaKnown RBP7.18□□□□□ -1.26
CLK1-210ENST00000473565 MTMR4Q9NYA4 1195 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 BCS1LQ9Y276 419 aa7.18□□□□□ -1.26
CLK1-210ENST00000473565 HLA-DOAP06340 250 aa7.17□□□□□ -1.26
CLK1-210ENST00000473565 KRT2P35908 639 aa7.17□□□□□ -1.26
CLK1-210ENST00000473565 NLRP5P59047 1200 aa7.17□□□□□ -1.26
CLK1-210ENST00000473565 JAG1P78504 1218 aa7.17□□□□□ -1.26
CLK1-210ENST00000473565 PFKFB3Q16875 520 aaPredicted RBP7.17□□□□□ -1.26
CLK1-210ENST00000473565 DALRD3Q5D0E6 543 aaKnown RBP7.17□□□□□ -1.26
CLK1-210ENST00000473565 ADALQ6DHV7 355 aa7.17□□□□□ -1.26
CLK1-210ENST00000473565 RSBN1LQ6PCB5 846 aaPredicted RBP7.17□□□□□ -1.26
CLK1-210ENST00000473565 HEATR3Q7Z4Q2 680 aa7.17□□□□□ -1.26
CLK1-210ENST00000473565 KCNG4Q8TDN1 519 aa7.17□□□□□ -1.26
CLK1-210ENST00000473565 PSMD1Q99460 953 aa7.17□□□□□ -1.26
CLK1-210ENST00000473565 MTFR1LQ9H019 292 aa7.17□□□□□ -1.26
CLK1-210ENST00000473565 GPCPD1Q9NPB8 672 aa7.17□□□□□ -1.26
CLK1-210ENST00000473565 SERPINA10Q9UK55 444 aa7.17□□□□□ -1.26
CLK1-210ENST00000473565 PALM3A6NDB9 673 aaPredicted RBP7.17□□□□□ -1.26
CLK1-210ENST00000473565 PARP1P09874 1014 aaKnown RBP7.17□□□□□ -1.26
CLK1-210ENST00000473565 TOP1P11387 765 aaKnown RBP7.17□□□□□ -1.26
CLK1-210ENST00000473565 RASSF7Q02833 373 aa7.17□□□□□ -1.26
CLK1-210ENST00000473565 FAM160A1Q05DH4 1040 aa7.17□□□□□ -1.26
CLK1-210ENST00000473565 TYRO3Q06418 890 aa7.17□□□□□ -1.26
CLK1-210ENST00000473565 WWC2Q6AWC2 1192 aa7.17□□□□□ -1.26
CLK1-210ENST00000473565 SHC4Q6S5L8 630 aa7.17□□□□□ -1.26
CLK1-210ENST00000473565 FOXP1Q9H334 677 aaPredicted RBP7.17□□□□□ -1.26
CLK1-210ENST00000473565 VEZTQ9HBM0 779 aa7.17□□□□□ -1.26
CLK1-210ENST00000473565 KIF13BQ9NQT8 1826 aa7.17□□□□□ -1.26
CLK1-210ENST00000473565 NFKBIEO00221 500 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 KINO60870 393 aaKnown RBP7.16□□□□□ -1.26
CLK1-210ENST00000473565 PFKFB1P16118 471 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 CXCL9Q07325 125 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 RRP1BQ14684 758 aaKnown RBP7.16□□□□□ -1.26
CLK1-210ENST00000473565 PIK3AP1Q6ZUJ8 805 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 NIM1KQ8IY84 436 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 FMR1NBQ8N0W7 255 aaPredicted RBP7.16□□□□□ -1.26
CLK1-210ENST00000473565 NLGN2Q8NFZ4 835 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 PIGSQ96S52 555 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.16□□□□□ -1.26
CLK1-210ENST00000473565 MYH4Q9Y623 1939 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 IGKV6D-41A0A0C4DH26 115 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 EGFRP00533 1210 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 XBP1P17861 261 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 SLC16A2P36021 539 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 FKBP1AP62942 108 aaKnown RBP7.16□□□□□ -1.26
CLK1-210ENST00000473565 PLCB2Q00722 1185 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 ZNF174Q15697 407 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 ANO6Q4KMQ2 910 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 TTBK2Q6IQ55 1244 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 USP49Q70CQ1 688 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 IDI2Q9BXS1 227 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 PSME4Q14997 1843 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 SPDYE2BA6NHP3 402 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 LETM1O95202 739 aaPredicted RBP7.16□□□□□ -1.26
CLK1-210ENST00000473565 VIL1P09327 827 aaKnown RBP7.16□□□□□ -1.26
CLK1-210ENST00000473565 SPDYE6P0CI01 402 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 PDHBP11177 359 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 PRELPP51888 382 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 HDLBPQ00341 1268 aaKnown RBP7.16□□□□□ -1.26
CLK1-210ENST00000473565 SEPT2Q15019 361 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 RBM26Q5T8P6 1007 aaKnown RBP7.16□□□□□ -1.26
CLK1-210ENST00000473565 KCTD1Q719H9 257 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 TNFRSF25Q93038 417 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 GMLQ99445 158 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms