RNA–Protein interactions for RNA: ENST00000473550.1

DUBR-203, DPPA2 upstream binding RNA, humanhuman

TSL 3 BASIC

Gene DUBR, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-203ENST00000473550 EVX2Q03828 476 aa11.33□□□□□ -0.6
DUBR-203ENST00000473550 COL9A3Q14050 684 aaPredicted RBP11.33□□□□□ -0.6
DUBR-203ENST00000473550 RCSD1Q6JBY9 416 aa11.33□□□□□ -0.6
DUBR-203ENST00000473550 CDC37L1Q7L3B6 337 aa11.33□□□□□ -0.6
DUBR-203ENST00000473550 USP48Q86UV5 1035 aa11.33□□□□□ -0.6
DUBR-203ENST00000473550 CCDC83Q8IWF9 413 aa11.33□□□□□ -0.6
DUBR-203ENST00000473550 FANCBQ8NB91 859 aa11.33□□□□□ -0.6
DUBR-203ENST00000473550 PNMA1Q8ND90 353 aa11.33□□□□□ -0.6
DUBR-203ENST00000473550 CEP95Q96GE4 821 aa11.33□□□□□ -0.6
DUBR-203ENST00000473550 ARHGEF10LQ9HCE6 1279 aa11.33□□□□□ -0.6
DUBR-203ENST00000473550 CHMP5Q9NZZ3 219 aa11.33□□□□□ -0.6
DUBR-203ENST00000473550 BRPF3Q9ULD4 1205 aa11.33□□□□□ -0.6
DUBR-203ENST00000473550 PPP1R12BO60237 982 aaPredicted RBP11.32□□□□□ -0.6
DUBR-203ENST00000473550 SMARCA1P28370 1054 aa11.32□□□□□ -0.6
DUBR-203ENST00000473550 CAP2P40123 477 aa11.32□□□□□ -0.6
DUBR-203ENST00000473550 SCRN1Q12765 414 aa11.32□□□□□ -0.6
DUBR-203ENST00000473550 TROAPQ12815 778 aa11.32□□□□□ -0.6
DUBR-203ENST00000473550 STK3Q13188 491 aa11.32□□□□□ -0.6
DUBR-203ENST00000473550 RTN1Q16799 776 aa11.32□□□□□ -0.6
DUBR-203ENST00000473550 TRIM22Q8IYM9 498 aa11.32□□□□□ -0.6
DUBR-203ENST00000473550 WASF1Q92558 559 aa11.32□□□□□ -0.6
DUBR-203ENST00000473550 TMEM47Q9BQJ4 181 aa11.32□□□□□ -0.6
DUBR-203ENST00000473550 ZNF112Q9UJU3 913 aa11.32□□□□□ -0.6
DUBR-203ENST00000473550 HPS5Q9UPZ3 1129 aa11.32□□□□□ -0.6
DUBR-203ENST00000473550 STK36Q9NRP7 1315 aa11.32□□□□□ -0.6
DUBR-203ENST00000473550 TTLL13PA6NNM8 815 aa11.31□□□□□ -0.6
DUBR-203ENST00000473550 LARGE1O95461 756 aa11.31□□□□□ -0.6
DUBR-203ENST00000473550 IFNAR1P17181 557 aa11.31□□□□□ -0.6
DUBR-203ENST00000473550 SLC4A3P48751 1232 aa11.31□□□□□ -0.6
DUBR-203ENST00000473550 ICA1Q05084 483 aa11.31□□□□□ -0.6
DUBR-203ENST00000473550 ASPRV1Q53RT3 343 aa11.31□□□□□ -0.6
DUBR-203ENST00000473550 GPATCH4Q5T3I0 446 aaKnown RBP11.31□□□□□ -0.6
DUBR-203ENST00000473550 KRT26Q7Z3Y9 468 aa11.31□□□□□ -0.6
DUBR-203ENST00000473550 MICU3Q86XE3 530 aa11.31□□□□□ -0.6
DUBR-203ENST00000473550 FAM177A1Q8N128 213 aaPredicted RBP11.31□□□□□ -0.6
DUBR-203ENST00000473550 NECAB1Q8N987 351 aa11.31□□□□□ -0.6
DUBR-203ENST00000473550 FAM184AQ8NB25 1140 aa11.31□□□□□ -0.6
DUBR-203ENST00000473550 FBXO22Q8NEZ5 403 aa11.31□□□□□ -0.6
DUBR-203ENST00000473550 SMARCC2Q8TAQ2 1214 aa11.31□□□□□ -0.6
DUBR-203ENST00000473550 LARP6Q9BRS8 491 aaKnown RBP11.31□□□□□ -0.6
DUBR-203ENST00000473550 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.31□□□□□ -0.6
DUBR-203ENST00000473550 AS3MTQ9HBK9 375 aa11.31□□□□□ -0.6
DUBR-203ENST00000473550 GPHNQ9NQX3 736 aaPredicted RBP11.31□□□□□ -0.6
DUBR-203ENST00000473550 ZBTB21Q9ULJ3 1066 aa11.31□□□□□ -0.6
DUBR-203ENST00000473550 PHF20L1A8MW92 1017 aa11.3□□□□□ -0.6
DUBR-203ENST00000473550 POTECB2RU33 542 aa11.3□□□□□ -0.6
DUBR-203ENST00000473550 NMT2O60551 498 aa11.3□□□□□ -0.6
DUBR-203ENST00000473550 GH2P01242 217 aa11.3□□□□□ -0.6
DUBR-203ENST00000473550 CCT2P78371 535 aaKnown RBP11.3□□□□□ -0.6
DUBR-203ENST00000473550 AKAP17AQ02040 695 aaKnown RBP11.3□□□□□ -0.6
DUBR-203ENST00000473550 GRM4Q14833 912 aa11.3□□□□□ -0.6
DUBR-203ENST00000473550 EAPPQ56P03 285 aaPredicted RBP11.3□□□□□ -0.6
DUBR-203ENST00000473550 NOL9Q5SY16 702 aaKnown RBP11.3□□□□□ -0.6
DUBR-203ENST00000473550 NBPF12Q5TAG4 269 aaPredicted RBP11.3□□□□□ -0.6
DUBR-203ENST00000473550 POTEHQ6S545 545 aa11.3□□□□□ -0.6
DUBR-203ENST00000473550 LDHDQ86WU2 507 aa11.3□□□□□ -0.6
DUBR-203ENST00000473550 NSUN7Q8NE18 718 aaKnown RBP11.3□□□□□ -0.6
DUBR-203ENST00000473550 GMCL1P1Q8NEA9 526 aa11.3□□□□□ -0.6
DUBR-203ENST00000473550 NKX2-3Q8TAU0 364 aa11.3□□□□□ -0.6
DUBR-203ENST00000473550 NUP133Q8WUM0 1156 aa11.3□□□□□ -0.6
DUBR-203ENST00000473550 DCAF4Q8WV16 495 aa11.3□□□□□ -0.6
DUBR-203ENST00000473550 RNF26Q9BY78 433 aaPredicted RBP11.3□□□□□ -0.6
DUBR-203ENST00000473550 CLIP2Q9UDT6 1046 aa11.3□□□□□ -0.6
DUBR-203ENST00000473550 ASTN2O75129 1339 aaPredicted RBP11.3□□□□□ -0.6
DUBR-203ENST00000473550 FAM196BA6NMK8 535 aa11.29□□□□□ -0.6
DUBR-203ENST00000473550 USP17L5A8MUK1 530 aa11.29□□□□□ -0.6
DUBR-203ENST00000473550 PARP1P09874 1014 aaKnown RBP11.29□□□□□ -0.6
DUBR-203ENST00000473550 EEF2P13639 858 aaKnown RBP11.29□□□□□ -0.6
DUBR-203ENST00000473550 XBP1P17861 261 aa11.29□□□□□ -0.6
DUBR-203ENST00000473550 GJB2P29033 226 aa11.29□□□□□ -0.6
DUBR-203ENST00000473550 DDIT3P35638 169 aa11.29□□□□□ -0.6
DUBR-203ENST00000473550 IREB2P48200 963 aaKnown RBP11.29□□□□□ -0.6
DUBR-203ENST00000473550 SSRP1Q08945 709 aaKnown RBP11.29□□□□□ -0.6
DUBR-203ENST00000473550 SEPT2Q15019 361 aa11.29□□□□□ -0.6
DUBR-203ENST00000473550 RAB3GAP1Q15042 981 aa11.29□□□□□ -0.6
DUBR-203ENST00000473550 MIGA2Q7L4E1 593 aa11.29□□□□□ -0.6
DUBR-203ENST00000473550 SCYL3Q8IZE3 742 aa11.29□□□□□ -0.6
DUBR-203ENST00000473550 KLRG1Q96E93 195 aa11.29□□□□□ -0.6
DUBR-203ENST00000473550 GOPCQ9HD26 462 aa11.29□□□□□ -0.6
DUBR-203ENST00000473550 PICK1Q9NRD5 415 aa11.29□□□□□ -0.6
DUBR-203ENST00000473550 WDR33Q9C0J8 1336 aaKnown RBP11.29□□□□□ -0.6
DUBR-203ENST00000473550 PTPDC1A2A3K4 754 aa11.28□□□□□ -0.6
DUBR-203ENST00000473550 PALM3A6NDB9 673 aaPredicted RBP11.28□□□□□ -0.6
DUBR-203ENST00000473550 GALR2O43603 387 aaPredicted RBP11.28□□□□□ -0.6
DUBR-203ENST00000473550 GDF11O95390 407 aa11.28□□□□□ -0.6
DUBR-203ENST00000473550 DEXIO95424 95 aa11.28□□□□□ -0.6
DUBR-203ENST00000473550 SNHG28P0DPA3 235 aa11.28□□□□□ -0.6
DUBR-203ENST00000473550 ADD1P35611 737 aaKnown RBP11.28□□□□□ -0.6
DUBR-203ENST00000473550 USP14P54578 494 aa11.28□□□□□ -0.6
DUBR-203ENST00000473550 FKBP1BP68106 108 aa11.28□□□□□ -0.6
DUBR-203ENST00000473550 TRAF1Q13077 416 aa11.28□□□□□ -0.6
DUBR-203ENST00000473550 MAP3K11Q16584 847 aa11.28□□□□□ -0.6
DUBR-203ENST00000473550 TMTC3Q6ZXV5 915 aa11.28□□□□□ -0.6
DUBR-203ENST00000473550 CDCA5Q96FF9 252 aa11.28□□□□□ -0.6
DUBR-203ENST00000473550 GMCL1Q96IK5 515 aa11.28□□□□□ -0.6
DUBR-203ENST00000473550 WDR18Q9BV38 432 aa11.28□□□□□ -0.6
DUBR-203ENST00000473550 SPZ1Q9BXG8 430 aa11.28□□□□□ -0.6
DUBR-203ENST00000473550 SENP2Q9HC62 589 aa11.28□□□□□ -0.6
DUBR-203ENST00000473550 BMP2KQ9NSY1 1161 aaPredicted RBP11.28□□□□□ -0.6
DUBR-203ENST00000473550 TMX2Q9Y320 296 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms