RNA–Protein interactions for RNA: ENST00000473349.1

BRD3-205, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-205ENST00000473349 USP17L22D6RA61 530 aa11.47□□□□□ -0.57
BRD3-205ENST00000473349 USP17L17D6RBQ6 530 aa11.47□□□□□ -0.57
BRD3-205ENST00000473349 USP17L19D6RCP7 530 aa11.47□□□□□ -0.57
BRD3-205ENST00000473349 USP17L20D6RJB6 530 aa11.47□□□□□ -0.57
BRD3-205ENST00000473349 MBD4O95243 580 aa11.47□□□□□ -0.57
BRD3-205ENST00000473349 ZKSCAN1P17029 563 aaPredicted RBP11.47□□□□□ -0.57
BRD3-205ENST00000473349 MAPK4P31152 587 aa11.47□□□□□ -0.57
BRD3-205ENST00000473349 USP17L24Q0WX57 530 aa11.47□□□□□ -0.57
BRD3-205ENST00000473349 PDE3AQ14432 1141 aa11.47□□□□□ -0.57
BRD3-205ENST00000473349 HSP90AB4PQ58FF6 505 aa11.47□□□□□ -0.57
BRD3-205ENST00000473349 NECAB2Q7Z6G3 386 aa11.47□□□□□ -0.57
BRD3-205ENST00000473349 CCAR1Q8IX12 1150 aaKnown RBP11.47□□□□□ -0.57
BRD3-205ENST00000473349 LRCH3Q96II8 777 aa11.47□□□□□ -0.57
BRD3-205ENST00000473349 C12orf42Q96LP6 360 aa11.47□□□□□ -0.57
BRD3-205ENST00000473349 CRNKL1Q9BZJ0 848 aaKnown RBP11.47□□□□□ -0.57
BRD3-205ENST00000473349 DNAH12Q6ZR08 3092 aa11.47□□□□□ -0.57
BRD3-205ENST00000473349 SPDYE16A6NNV3 312 aaPredicted RBP11.46□□□□□ -0.57
BRD3-205ENST00000473349 TTF1Q15361 905 aaPredicted RBP11.46□□□□□ -0.57
BRD3-205ENST00000473349 TSHZ3Q63HK5 1081 aa11.46□□□□□ -0.57
BRD3-205ENST00000473349 SIAH1Q8IUQ4 282 aa11.46□□□□□ -0.57
BRD3-205ENST00000473349 RPAP2Q8IXW5 612 aaPredicted RBP11.46□□□□□ -0.57
BRD3-205ENST00000473349 SPICE1Q8N0Z3 855 aa11.46□□□□□ -0.57
BRD3-205ENST00000473349 NPLOC4Q8TAT6 608 aa11.46□□□□□ -0.57
BRD3-205ENST00000473349 SOCS4Q8WXH5 440 aa11.46□□□□□ -0.57
BRD3-205ENST00000473349 FAM212AQ96EL1 285 aa11.46□□□□□ -0.57
BRD3-205ENST00000473349 CWC22Q9HCG8 908 aaKnown RBP11.46□□□□□ -0.57
BRD3-205ENST00000473349 CABP5Q9NP86 173 aa11.46□□□□□ -0.57
BRD3-205ENST00000473349 PAG1Q9NWQ8 432 aa11.46□□□□□ -0.57
BRD3-205ENST00000473349 RCAN3Q9UKA8 241 aa11.46□□□□□ -0.57
BRD3-205ENST00000473349 OGDHLQ9ULD0 1010 aa11.46□□□□□ -0.57
BRD3-205ENST00000473349 DDX19BQ9UMR2 479 aa11.46□□□□□ -0.57
BRD3-205ENST00000473349 XRCC5P13010 732 aaKnown RBP11.45□□□□□ -0.58
BRD3-205ENST00000473349 AKR1B1P15121 316 aa11.45□□□□□ -0.58
BRD3-205ENST00000473349 ADD2P35612 726 aa11.45□□□□□ -0.58
BRD3-205ENST00000473349 RGS2P41220 211 aa11.45□□□□□ -0.58
BRD3-205ENST00000473349 MAP2K5Q13163 448 aa11.45□□□□□ -0.58
BRD3-205ENST00000473349 LHX8Q68G74 356 aa11.45□□□□□ -0.58
BRD3-205ENST00000473349 APBA2Q99767 749 aa11.45□□□□□ -0.58
BRD3-205ENST00000473349 TANGO6Q9C0B7 1094 aa11.45□□□□□ -0.58
BRD3-205ENST00000473349 NBPF3Q9H094 633 aa11.45□□□□□ -0.58
BRD3-205ENST00000473349 C11orf49Q9H6J7 331 aa11.45□□□□□ -0.58
BRD3-205ENST00000473349 RABGAP1Q9Y3P9 1069 aa11.45□□□□□ -0.58
BRD3-205ENST00000473349 BAZ2AQ9UIF9 1905 aaKnown RBP11.45□□□□□ -0.58
BRD3-205ENST00000473349 HMMRO75330 724 aa11.44□□□□□ -0.58
BRD3-205ENST00000473349 MS4A1P11836 297 aa11.44□□□□□ -0.58
BRD3-205ENST00000473349 ATP5JP18859 108 aa11.44□□□□□ -0.58
BRD3-205ENST00000473349 CYP2C19P33261 490 aa11.44□□□□□ -0.58
BRD3-205ENST00000473349 USP14P54578 494 aa11.44□□□□□ -0.58
BRD3-205ENST00000473349 STK11IPQ8N1F8 1099 aa11.44□□□□□ -0.58
BRD3-205ENST00000473349 TRPV1Q8NER1 839 aa11.44□□□□□ -0.58
BRD3-205ENST00000473349 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.44□□□□□ -0.58
BRD3-205ENST00000473349 HAUS7Q99871 368 aa11.44□□□□□ -0.58
BRD3-205ENST00000473349 USP17L12C9JPN9 530 aa11.43□□□□□ -0.58
BRD3-205ENST00000473349 USP17L21D6R901 530 aa11.43□□□□□ -0.58
BRD3-205ENST00000473349 RAB11FIP3O75154 756 aa11.43□□□□□ -0.58
BRD3-205ENST00000473349 PTPREP23469 700 aa11.43□□□□□ -0.58
BRD3-205ENST00000473349 LRRC26Q2I0M4 334 aa11.43□□□□□ -0.58
BRD3-205ENST00000473349 ANO1Q5XXA6 986 aa11.43□□□□□ -0.58
BRD3-205ENST00000473349 ANKLE1Q8NAG6 615 aa11.43□□□□□ -0.58
BRD3-205ENST00000473349 GTF3C2Q8WUA4 911 aaPredicted RBP11.43□□□□□ -0.58
BRD3-205ENST00000473349 ATG4CQ96DT6 458 aa11.43□□□□□ -0.58
BRD3-205ENST00000473349 MOV10L1Q9BXT6 1211 aaKnown RBP11.43□□□□□ -0.58
BRD3-205ENST00000473349 PUS7LQ9H0K6 701 aaKnown RBP11.43□□□□□ -0.58
BRD3-205ENST00000473349 RLFQ13129 1914 aa11.43□□□□□ -0.58
BRD3-205ENST00000473349 COL6A3P12111 3177 aa11.42□□□□□ -0.58
BRD3-205ENST00000473349 SLC15A5A6NIM6 579 aa11.42□□□□□ -0.58
BRD3-205ENST00000473349 MAP3K13O43283 966 aa11.42□□□□□ -0.58
BRD3-205ENST00000473349 COL6A1P12109 1028 aa11.42□□□□□ -0.58
BRD3-205ENST00000473349 CNGA1P29973 690 aa11.42□□□□□ -0.58
BRD3-205ENST00000473349 MAGEA10P43363 369 aaPredicted RBP11.42□□□□□ -0.58
BRD3-205ENST00000473349 CDK8P49336 464 aa11.42□□□□□ -0.58
BRD3-205ENST00000473349 ATP2B2Q01814 1243 aa11.42□□□□□ -0.58
BRD3-205ENST00000473349 GRB14Q14449 540 aa11.42□□□□□ -0.58
BRD3-205ENST00000473349 C12orf60Q5U649 245 aa11.42□□□□□ -0.58
BRD3-205ENST00000473349 LBX2Q6XYB7 198 aa11.42□□□□□ -0.58
BRD3-205ENST00000473349 GDF15Q99988 308 aa11.42□□□□□ -0.58
BRD3-205ENST00000473349 CHMP4BQ9H444 224 aaKnown RBP11.42□□□□□ -0.58
BRD3-205ENST00000473349 FBXO28Q9NVF7 368 aa11.42□□□□□ -0.58
BRD3-205ENST00000473349 SLC4A4Q9Y6R1 1079 aa11.42□□□□□ -0.58
BRD3-205ENST00000473349 COBLO75128 1261 aa11.41□□□□□ -0.58
BRD3-205ENST00000473349 FLOT1O75955 427 aa11.41□□□□□ -0.58
BRD3-205ENST00000473349 ERCC3P19447 782 aa11.41□□□□□ -0.58
BRD3-205ENST00000473349 ADORA2AP29274 412 aa11.41□□□□□ -0.58
BRD3-205ENST00000473349 ATN1P54259 1190 aaPredicted RBP11.41□□□□□ -0.58
BRD3-205ENST00000473349 CCNA1P78396 465 aa11.41□□□□□ -0.58
BRD3-205ENST00000473349 ICA1Q05084 483 aa11.41□□□□□ -0.58
BRD3-205ENST00000473349 PLS1Q14651 629 aa11.41□□□□□ -0.58
BRD3-205ENST00000473349 COG2Q14746 738 aa11.41□□□□□ -0.58
BRD3-205ENST00000473349 PRAMEF19Q5SWL8 479 aa11.41□□□□□ -0.58
BRD3-205ENST00000473349 ASTLQ6HA08 431 aaPredicted RBP11.41□□□□□ -0.58
BRD3-205ENST00000473349 TMEM179Q6ZVK1 233 aa11.41□□□□□ -0.58
BRD3-205ENST00000473349 TRMT44Q8IYL2 757 aaKnown RBP11.41□□□□□ -0.58
BRD3-205ENST00000473349 LRRCC1Q9C099 1032 aa11.41□□□□□ -0.58
BRD3-205ENST00000473349 SPATC1LQ9H0A9 340 aa11.41□□□□□ -0.58
BRD3-205ENST00000473349 IVNS1ABPQ9Y6Y0 642 aa11.41□□□□□ -0.58
BRD3-205ENST00000473349 LAMA2P24043 3122 aaKnown RBP11.41□□□□□ -0.58
BRD3-205ENST00000473349 FRMPD3Q5JV73 1810 aa11.4□□□□□ -0.58
BRD3-205ENST00000473349 RAD21O60216 631 aa11.4□□□□□ -0.58
BRD3-205ENST00000473349 EEF2P13639 858 aaKnown RBP11.4□□□□□ -0.58
BRD3-205ENST00000473349 MDM2Q00987 491 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms