RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 hCG_1642624A0A1W2PR95 340 aa31.92■■■□□ 2.7
HOXB3-207ENST00000472863 ATP2B2Q01814 1243 aa31.92■■■□□ 2.7
HOXB3-207ENST00000472863 RNF26Q9BY78 433 aaPredicted RBP31.92■■■□□ 2.7
HOXB3-207ENST00000472863 BAZ2BQ9UIF8 2168 aaKnown RBP31.91■■■□□ 2.7
HOXB3-207ENST00000472863 ANGEL2Q5VTE6 544 aaKnown RBP31.91■■■□□ 2.7
HOXB3-207ENST00000472863 DEFB129Q9H1M3 183 aa31.91■■■□□ 2.7
HOXB3-207ENST00000472863 ATP6V1DQ9Y5K8 247 aa31.91■■■□□ 2.7
HOXB3-207ENST00000472863 TBC1D12O60347 775 aa31.9■■■□□ 2.7
HOXB3-207ENST00000472863 GH2P01242 217 aa31.9■■■□□ 2.7
HOXB3-207ENST00000472863 GOLGA8HP0CJ92 632 aa31.9■■■□□ 2.7
HOXB3-207ENST00000472863 RESTQ13127 1097 aa31.9■■■□□ 2.7
HOXB3-207ENST00000472863 TMEM179Q6ZVK1 233 aa31.9■■■□□ 2.7
HOXB3-207ENST00000472863 KANSL2Q9H9L4 492 aa31.9■■■□□ 2.7
HOXB3-207ENST00000472863 TCHHQ07283 1943 aa31.9■■■□□ 2.7
HOXB3-207ENST00000472863 PALM3A6NDB9 673 aaPredicted RBP31.9■■■□□ 2.7
HOXB3-207ENST00000472863 DDX11L8A8MPP1 907 aa31.9■■■□□ 2.7
HOXB3-207ENST00000472863 DEXIO95424 95 aa31.9■■■□□ 2.7
HOXB3-207ENST00000472863 USP17L2Q6R6M4 530 aa31.9■■■□□ 2.7
HOXB3-207ENST00000472863 SIAH1Q8IUQ4 282 aa31.9■■■□□ 2.7
HOXB3-207ENST00000472863 CNTNAP5Q8WYK1 1306 aa31.89■■■□□ 2.7
HOXB3-207ENST00000472863 USP17L5A8MUK1 530 aa31.89■■■□□ 2.7
HOXB3-207ENST00000472863 PRPF3O43395 683 aaKnown RBP31.89■■■□□ 2.7
HOXB3-207ENST00000472863 EEF2P13639 858 aaKnown RBP31.89■■■□□ 2.7
HOXB3-207ENST00000472863 DNM1Q05193 864 aaKnown RBP31.89■■■□□ 2.7
HOXB3-207ENST00000472863 AKAP17AQ02040 695 aaKnown RBP31.88■■■□□ 2.69
HOXB3-207ENST00000472863 PKN1Q16512 942 aa31.88■■■□□ 2.69
HOXB3-207ENST00000472863 WASF1Q92558 559 aa31.88■■■□□ 2.69
HOXB3-207ENST00000472863 MAP3K10Q02779 954 aa31.88■■■□□ 2.69
HOXB3-207ENST00000472863 KRT40Q6A162 431 aa31.88■■■□□ 2.69
HOXB3-207ENST00000472863 GOLGA6L22H0YM25 854 aa31.87■■■□□ 2.69
HOXB3-207ENST00000472863 ANP32EQ9BTT0 268 aa31.87■■■□□ 2.69
HOXB3-207ENST00000472863 GDPD2Q9HCC8 539 aa31.87■■■□□ 2.69
HOXB3-207ENST00000472863 CABP5Q9NP86 173 aa31.87■■■□□ 2.69
HOXB3-207ENST00000472863 CNPY2Q9Y2B0 182 aa31.87■■■□□ 2.69
HOXB3-207ENST00000472863 PARP1P09874 1014 aaKnown RBP31.87■■■□□ 2.69
HOXB3-207ENST00000472863 PDHBP11177 359 aa31.87■■■□□ 2.69
HOXB3-207ENST00000472863 SLC35G1Q2M3R5 365 aa31.87■■■□□ 2.69
HOXB3-207ENST00000472863 PIBF1Q8WXW3 757 aa31.87■■■□□ 2.69
HOXB3-207ENST00000472863 ZSCAN16Q9H4T2 348 aaPredicted RBP31.87■■■□□ 2.69
HOXB3-207ENST00000472863 NYAP2Q9P242 653 aa31.87■■■□□ 2.69
HOXB3-207ENST00000472863 MYH6P13533 1939 aa31.86■■■□□ 2.69
HOXB3-207ENST00000472863 MYH4Q9Y623 1939 aa31.86■■■□□ 2.69
HOXB3-207ENST00000472863 GRIN3BO60391 1043 aa31.86■■■□□ 2.69
HOXB3-207ENST00000472863 LMOD1P29536 600 aaPredicted RBP31.86■■■□□ 2.69
HOXB3-207ENST00000472863 GNAQP50148 359 aa31.86■■■□□ 2.69
HOXB3-207ENST00000472863 CPVLQ9H3G5 476 aa31.86■■■□□ 2.69
HOXB3-207ENST00000472863 GGA3Q9NZ52 723 aa31.86■■■□□ 2.69
HOXB3-207ENST00000472863 KLRF2D3W0D1 207 aa31.85■■■□□ 2.69
HOXB3-207ENST00000472863 ICA1Q05084 483 aa31.85■■■□□ 2.69
HOXB3-207ENST00000472863 PPP4R3BQ5MIZ7 849 aa31.85■■■□□ 2.69
HOXB3-207ENST00000472863 MKL1Q969V6 931 aa31.85■■■□□ 2.69
HOXB3-207ENST00000472863 PRPF40AO75400 957 aaKnown RBP31.85■■■□□ 2.69
HOXB3-207ENST00000472863 NBPF12Q5TAG4 269 aaPredicted RBP31.85■■■□□ 2.69
HOXB3-207ENST00000472863 DPY19L2Q6NUT2 758 aa31.85■■■□□ 2.69
HOXB3-207ENST00000472863 CYTH3O43739 400 aa31.84■■■□□ 2.69
HOXB3-207ENST00000472863 NCLP19338 710 aaKnown RBP31.84■■■□□ 2.69
HOXB3-207ENST00000472863 PRAMEF18Q5VWM3 479 aa31.84■■■□□ 2.69
HOXB3-207ENST00000472863 ADARB2Q9NS39 739 aaKnown RBP31.84■■■□□ 2.69
HOXB3-207ENST00000472863 LMBRD1Q9NUN5 540 aa31.84■■■□□ 2.69
HOXB3-207ENST00000472863 SNHG28P0DPA3 235 aa31.83■■■□□ 2.69
HOXB3-207ENST00000472863 TRIM29Q14134 588 aa31.83■■■□□ 2.69
HOXB3-207ENST00000472863 APOBEC3FQ8IUX4 373 aaKnown RBP31.83■■■□□ 2.69
HOXB3-207ENST00000472863 RGS22Q8NE09 1264 aa31.83■■■□□ 2.69
HOXB3-207ENST00000472863 FRMPD2Q68DX3 1309 aaPredicted RBP31.83■■■□□ 2.69
HOXB3-207ENST00000472863 VEGFAP15692 232 aaPredicted RBP31.83■■■□□ 2.69
HOXB3-207ENST00000472863 SHISA4Q96DD7 197 aa31.83■■■□□ 2.69
HOXB3-207ENST00000472863 KCNJ14Q9UNX9 436 aa31.83■■■□□ 2.69
HOXB3-207ENST00000472863 PHF20L1A8MW92 1017 aa31.81■■■□□ 2.68
HOXB3-207ENST00000472863 KIF28PB7ZC32 967 aa31.81■■■□□ 2.68
HOXB3-207ENST00000472863 CAP2P40123 477 aa31.81■■■□□ 2.68
HOXB3-207ENST00000472863 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.81■■■□□ 2.68
HOXB3-207ENST00000472863 TFIP11Q9UBB9 837 aaKnown RBP31.81■■■□□ 2.68
HOXB3-207ENST00000472863 ZBTB21Q9ULJ3 1066 aa31.81■■■□□ 2.68
HOXB3-207ENST00000472863 SOCS7O14512 581 aa31.81■■■□□ 2.68
HOXB3-207ENST00000472863 KIF23Q02241 960 aaPredicted RBP31.81■■■□□ 2.68
HOXB3-207ENST00000472863 LZTS2Q9BRK4 669 aa31.81■■■□□ 2.68
HOXB3-207ENST00000472863 UBA5Q9GZZ9 404 aa31.81■■■□□ 2.68
HOXB3-207ENST00000472863 VPS54Q9P1Q0 977 aa31.81■■■□□ 2.68
HOXB3-207ENST00000472863 USP48Q86UV5 1035 aa31.8■■■□□ 2.68
HOXB3-207ENST00000472863 POLR2AP24928 1970 aaKnown RBP31.8■■■□□ 2.68
HOXB3-207ENST00000472863 A0A1W2PRG0 241 aa31.79■■■□□ 2.68
HOXB3-207ENST00000472863 RAD21O60216 631 aa31.79■■■□□ 2.68
HOXB3-207ENST00000472863 GPCPD1Q9NPB8 672 aa31.79■■■□□ 2.68
HOXB3-207ENST00000472863 FIBPO43427 364 aa31.79■■■□□ 2.68
HOXB3-207ENST00000472863 ZNF543Q08ER8 600 aa31.79■■■□□ 2.68
HOXB3-207ENST00000472863 PFKFB3Q16875 520 aaPredicted RBP31.79■■■□□ 2.68
HOXB3-207ENST00000472863 ASPRV1Q53RT3 343 aa31.79■■■□□ 2.68
HOXB3-207ENST00000472863 SCG2P13521 617 aa31.78■■■□□ 2.68
HOXB3-207ENST00000472863 TRAK2O60296 914 aa31.77■■■□□ 2.68
HOXB3-207ENST00000472863 MMP1P03956 469 aa31.77■■■□□ 2.68
HOXB3-207ENST00000472863 L3MBTL3Q96JM7 780 aaPredicted RBP31.77■■■□□ 2.68
HOXB3-207ENST00000472863 SPZ1Q9BXG8 430 aa31.77■■■□□ 2.68
HOXB3-207ENST00000472863 VAT1LQ9HCJ6 419 aa31.77■■■□□ 2.68
HOXB3-207ENST00000472863 ECE1P42892 770 aa31.77■■■□□ 2.68
HOXB3-207ENST00000472863 KRT85P78386 507 aa31.77■■■□□ 2.68
HOXB3-207ENST00000472863 ACER1Q8TDN7 264 aa31.77■■■□□ 2.68
HOXB3-207ENST00000472863 GLTPD2A6NH11 291 aa31.76■■■□□ 2.67
HOXB3-207ENST00000472863 F5H6K3 240 aa31.76■■■□□ 2.67
HOXB3-207ENST00000472863 KLRC3Q07444 240 aa31.76■■■□□ 2.67
HOXB3-207ENST00000472863 SLFN13Q68D06 897 aa31.76■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms