RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 NEDD1Q8NHV4 660 aa12.43□□□□□ -0.42
SMARCD3-208ENST00000472789 ESR2Q92731 530 aa12.43□□□□□ -0.42
SMARCD3-208ENST00000472789 KCNB2Q92953 911 aa12.43□□□□□ -0.42
SMARCD3-208ENST00000472789 IL17RAQ96F46 866 aa12.43□□□□□ -0.42
SMARCD3-208ENST00000472789 TM6SF1Q9BZW5 370 aa12.43□□□□□ -0.42
SMARCD3-208ENST00000472789 KIAA1683Q9H0B3 1180 aa12.43□□□□□ -0.42
SMARCD3-208ENST00000472789 CLIP2Q9UDT6 1046 aa12.43□□□□□ -0.42
SMARCD3-208ENST00000472789 ISY1Q9ULR0 285 aaKnown RBP12.43□□□□□ -0.42
SMARCD3-208ENST00000472789 AGTPBP1Q9UPW5 1226 aa12.43□□□□□ -0.42
SMARCD3-208ENST00000472789 PHIPQ8WWQ0 1821 aa12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 A0A1W2PRG0 241 aa12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 SLC27A2O14975 620 aa12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 NMT2O60551 498 aa12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 KDM4AO75164 1064 aa12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 CYP2C8P10632 490 aa12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 PCP11498 1178 aaKnown RBP12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 OSBPP22059 807 aa12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 IRX3P78415 501 aaPredicted RBP12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 TRDNQ13061 729 aa12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 PABPC4Q13310 644 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 SH3D19Q5HYK7 790 aa12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 SAMD1Q6SPF0 538 aaPredicted RBP12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 HSCBQ8IWL3 235 aa12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 SPICE1Q8N0Z3 855 aa12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 SMCR8Q8TEV9 937 aaPredicted RBP12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 CEP95Q96GE4 821 aa12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 IPO9Q96P70 1041 aaKnown RBP12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 PARK7Q99497 189 aaKnown RBP12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 KRT23Q9C075 422 aa12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 R3HDMLQ9H3Y0 253 aa12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 GOPCQ9HD26 462 aa12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 EMILIN3Q9NT22 766 aa12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 STX8Q9UNK0 236 aa12.42□□□□□ -0.42
SMARCD3-208ENST00000472789 B4E1Z4 1266 aa12.41□□□□□ -0.42
SMARCD3-208ENST00000472789 ECM2O94769 699 aaPredicted RBP12.41□□□□□ -0.42
SMARCD3-208ENST00000472789 TTLL1O95922 423 aa12.41□□□□□ -0.42
SMARCD3-208ENST00000472789 CYP21A2P08686 494 aa12.41□□□□□ -0.42
SMARCD3-208ENST00000472789 VCAM1P19320 739 aa12.41□□□□□ -0.42
SMARCD3-208ENST00000472789 PPP4R3BQ5MIZ7 849 aa12.41□□□□□ -0.42
SMARCD3-208ENST00000472789 RALYLQ86SE5 291 aaKnown RBP12.41□□□□□ -0.42
SMARCD3-208ENST00000472789 SIAH1Q8IUQ4 282 aa12.41□□□□□ -0.42
SMARCD3-208ENST00000472789 LRRC47Q8N1G4 583 aaKnown RBP12.41□□□□□ -0.42
SMARCD3-208ENST00000472789 CHMP4CQ96CF2 233 aa12.41□□□□□ -0.42
SMARCD3-208ENST00000472789 ZKSCAN3Q9BRR0 538 aa12.41□□□□□ -0.42
SMARCD3-208ENST00000472789 TANGO6Q9C0B7 1094 aa12.41□□□□□ -0.42
SMARCD3-208ENST00000472789 CNNM2Q9H8M5 875 aa12.41□□□□□ -0.42
SMARCD3-208ENST00000472789 ZCCHC17Q9NP64 241 aaKnown RBP12.41□□□□□ -0.42
SMARCD3-208ENST00000472789 MTMR4Q9NYA4 1195 aa12.41□□□□□ -0.42
SMARCD3-208ENST00000472789 NYAP2Q9P242 653 aa12.41□□□□□ -0.42
SMARCD3-208ENST00000472789 PNMA3Q9UL41 463 aa12.41□□□□□ -0.42
SMARCD3-208ENST00000472789 MTMR7Q9Y216 660 aa12.41□□□□□ -0.42
SMARCD3-208ENST00000472789 TMX2Q9Y320 296 aa12.41□□□□□ -0.42
SMARCD3-208ENST00000472789 SNX14Q9Y5W7 946 aa12.41□□□□□ -0.42
SMARCD3-208ENST00000472789 CYP46A1Q9Y6A2 500 aa12.41□□□□□ -0.42
SMARCD3-208ENST00000472789 IGKV6D-41A0A0C4DH26 115 aa12.4□□□□□ -0.42
SMARCD3-208ENST00000472789 FGRP09769 529 aa12.4□□□□□ -0.42
SMARCD3-208ENST00000472789 NT5C2P49902 561 aa12.4□□□□□ -0.42
SMARCD3-208ENST00000472789 NEK4P51957 841 aa12.4□□□□□ -0.42
SMARCD3-208ENST00000472789 PRPF38BQ5VTL8 546 aaKnown RBP12.4□□□□□ -0.42
SMARCD3-208ENST00000472789 BLOC1S2Q6QNY1 142 aa12.4□□□□□ -0.42
SMARCD3-208ENST00000472789 CTU1Q7Z7A3 348 aaKnown RBP12.4□□□□□ -0.42
SMARCD3-208ENST00000472789 SNX21Q969T3 373 aa12.4□□□□□ -0.42
SMARCD3-208ENST00000472789 JAKMIP1Q96N16 626 aaKnown RBP12.4□□□□□ -0.42
SMARCD3-208ENST00000472789 NEK1Q96PY6 1258 aa12.4□□□□□ -0.42
SMARCD3-208ENST00000472789 ASCC2Q9H1I8 757 aaPredicted RBP12.4□□□□□ -0.42
SMARCD3-208ENST00000472789 RPAP3Q9H6T3 665 aaPredicted RBP12.4□□□□□ -0.42
SMARCD3-208ENST00000472789 VCPKMTQ9H867 229 aa12.4□□□□□ -0.42
SMARCD3-208ENST00000472789 CPA4Q9UI42 421 aa12.4□□□□□ -0.42
SMARCD3-208ENST00000472789 PLIN4Q96Q06 1357 aa12.4□□□□□ -0.42
SMARCD3-208ENST00000472789 PTPRFP10586 1907 aa12.39□□□□□ -0.43
SMARCD3-208ENST00000472789 USP17L15C9J2P7 530 aa12.39□□□□□ -0.43
SMARCD3-208ENST00000472789 USP17L13C9JLJ4 530 aa12.39□□□□□ -0.43
SMARCD3-208ENST00000472789 USP17L11C9JVI0 530 aa12.39□□□□□ -0.43
SMARCD3-208ENST00000472789 USP17L18D6R9N7 530 aa12.39□□□□□ -0.43
SMARCD3-208ENST00000472789 USP17L22D6RA61 530 aa12.39□□□□□ -0.43
SMARCD3-208ENST00000472789 USP17L17D6RBQ6 530 aa12.39□□□□□ -0.43
SMARCD3-208ENST00000472789 USP17L19D6RCP7 530 aa12.39□□□□□ -0.43
SMARCD3-208ENST00000472789 USP17L20D6RJB6 530 aa12.39□□□□□ -0.43
SMARCD3-208ENST00000472789 GPR25O00155 361 aa12.39□□□□□ -0.43
SMARCD3-208ENST00000472789 CASTP20810 708 aaKnown RBP12.39□□□□□ -0.43
SMARCD3-208ENST00000472789 USP17L24Q0WX57 530 aa12.39□□□□□ -0.43
SMARCD3-208ENST00000472789 ANKRD1Q15327 319 aa12.39□□□□□ -0.43
SMARCD3-208ENST00000472789 IQCA1Q86XH1 822 aa12.39□□□□□ -0.43
SMARCD3-208ENST00000472789 C12orf42Q96LP6 360 aa12.39□□□□□ -0.43
SMARCD3-208ENST00000472789 KIF2CQ99661 725 aa12.39□□□□□ -0.43
SMARCD3-208ENST00000472789 UBAC1Q9BSL1 405 aa12.39□□□□□ -0.43
SMARCD3-208ENST00000472789 IL17RBQ9NRM6 502 aa12.39□□□□□ -0.43
SMARCD3-208ENST00000472789 SLC45A1Q9Y2W3 748 aa12.39□□□□□ -0.43
SMARCD3-208ENST00000472789 TAF6LQ9Y6J9 622 aa12.39□□□□□ -0.43
SMARCD3-208ENST00000472789 E7EWF7 191 aa12.38□□□□□ -0.43
SMARCD3-208ENST00000472789 TLR2O60603 784 aa12.38□□□□□ -0.43
SMARCD3-208ENST00000472789 FKTNO75072 461 aa12.38□□□□□ -0.43
SMARCD3-208ENST00000472789 KIAA1755Q5JYT7 1200 aa12.38□□□□□ -0.43
SMARCD3-208ENST00000472789 RUFY3Q7L099 469 aa12.38□□□□□ -0.43
SMARCD3-208ENST00000472789 RASEFQ8IZ41 740 aa12.38□□□□□ -0.43
SMARCD3-208ENST00000472789 NCOA7Q8NI08 942 aa12.38□□□□□ -0.43
SMARCD3-208ENST00000472789 NKX2-3Q8TAU0 364 aa12.38□□□□□ -0.43
SMARCD3-208ENST00000472789 ZNF296Q8WUU4 475 aaPredicted RBP12.38□□□□□ -0.43
SMARCD3-208ENST00000472789 LPAR1Q92633 364 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms