RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, human

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCFC2-208	ENST00000472230	MTFR1L	Q9H019	292 aa		21.08	■□□□□ 0.96
GCFC2-208	ENST00000472230	VPS33B	Q9H267	617 aa		21.08	■□□□□ 0.96
GCFC2-208	ENST00000472230	PARP1	P09874	1014 aa	Known RBP	21.07	■□□□□ 0.96
GCFC2-208	ENST00000472230	AKR1B1	P15121	316 aa		21.07	■□□□□ 0.96
GCFC2-208	ENST00000472230	NLRP5	P59047	1200 aa		21.07	■□□□□ 0.96
GCFC2-208	ENST00000472230	CCDC173	Q0VFZ6	552 aa		21.07	■□□□□ 0.96
GCFC2-208	ENST00000472230	CFAP100	Q494V2	611 aa		21.07	■□□□□ 0.96
GCFC2-208	ENST00000472230	TRIM34	Q9BYJ4	488 aa		21.07	■□□□□ 0.96
GCFC2-208	ENST00000472230	EHD4	Q9H223	541 aa		21.07	■□□□□ 0.96
GCFC2-208	ENST00000472230	PTPA	Q15257	358 aa		21.07	■□□□□ 0.96
GCFC2-208	ENST00000472230	RSBN1L	Q6PCB5	846 aa	Predicted RBP	21.07	■□□□□ 0.96
GCFC2-208	ENST00000472230	SASS6	Q6UVJ0	657 aa		21.07	■□□□□ 0.96
GCFC2-208	ENST00000472230	CABP5	Q9NP86	173 aa		21.07	■□□□□ 0.96
GCFC2-208	ENST00000472230	CEP131	Q9UPN4	1083 aa		21.07	■□□□□ 0.96
GCFC2-208	ENST00000472230		A0A1B0GVL5	298 aa		21.06	■□□□□ 0.96
GCFC2-208	ENST00000472230	PALM3	A6NDB9	673 aa	Predicted RBP	21.06	■□□□□ 0.96
GCFC2-208	ENST00000472230	ENGASE	Q8NFI3	743 aa		21.06	■□□□□ 0.96
GCFC2-208	ENST00000472230	MTMR4	Q9NYA4	1195 aa		21.06	■□□□□ 0.96
GCFC2-208	ENST00000472230	HDAC9	Q9UKV0	1011 aa		21.06	■□□□□ 0.96
GCFC2-208	ENST00000472230	NOL7	Q9UMY1	257 aa	Known RBP	21.06	■□□□□ 0.96
GCFC2-208	ENST00000472230	RAD17	O75943	681 aa		21.06	■□□□□ 0.96
GCFC2-208	ENST00000472230	SNW1	Q13573	536 aa	Known RBP	21.06	■□□□□ 0.96
GCFC2-208	ENST00000472230	RBM43	Q6ZSC3	357 aa	Known RBP	21.06	■□□□□ 0.96
GCFC2-208	ENST00000472230	NIM1K	Q8IY84	436 aa		21.06	■□□□□ 0.96
GCFC2-208	ENST00000472230	SHISA4	Q96DD7	197 aa		21.06	■□□□□ 0.96
GCFC2-208	ENST00000472230	KLRF2	D3W0D1	207 aa		21.05	■□□□□ 0.96
GCFC2-208	ENST00000472230	MPHOSPH10	O00566	681 aa	Known RBP	21.05	■□□□□ 0.96
GCFC2-208	ENST00000472230	NPM3	O75607	178 aa	Known RBP	21.05	■□□□□ 0.96
GCFC2-208	ENST00000472230	SHMT1	P34896	483 aa		21.05	■□□□□ 0.96
GCFC2-208	ENST00000472230	NOV	P48745	357 aa		21.05	■□□□□ 0.96
GCFC2-208	ENST00000472230	ZFPM1	Q8IX07	1006 aa		21.05	■□□□□ 0.96
GCFC2-208	ENST00000472230	TDRD3	Q9H7E2	651 aa	Known RBP	21.05	■□□□□ 0.96
GCFC2-208	ENST00000472230	SH3GLB2	Q9NR46	395 aa		21.05	■□□□□ 0.96
GCFC2-208	ENST00000472230	PI4KB	Q9UBF8	816 aa		21.05	■□□□□ 0.96
GCFC2-208	ENST00000472230	FAM198A	Q9UFP1	575 aa		21.05	■□□□□ 0.96
GCFC2-208	ENST00000472230	CMA1	P23946	247 aa		21.04	■□□□□ 0.96
GCFC2-208	ENST00000472230	CALML3	P27482	149 aa		21.04	■□□□□ 0.96
GCFC2-208	ENST00000472230	TYRO3	Q06418	890 aa		21.04	■□□□□ 0.96
GCFC2-208	ENST00000472230	UVSSA	Q2YD98	709 aa		21.04	■□□□□ 0.96
GCFC2-208	ENST00000472230	PPP4R3B	Q5MIZ7	849 aa		21.04	■□□□□ 0.96
GCFC2-208	ENST00000472230	CCDC17	Q96LX7	622 aa		21.04	■□□□□ 0.96
GCFC2-208	ENST00000472230	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	21.04	■□□□□ 0.96
GCFC2-208	ENST00000472230	CUTA	O60888	179 aa		21.04	■□□□□ 0.96
GCFC2-208	ENST00000472230	GOLGA8H	P0CJ92	632 aa		21.04	■□□□□ 0.96
GCFC2-208	ENST00000472230	ATP2B1	P20020	1258 aa		21.04	■□□□□ 0.96
GCFC2-208	ENST00000472230	TOB1	P50616	345 aa	Predicted RBP	21.04	■□□□□ 0.96
GCFC2-208	ENST00000472230	NDUFA8	P51970	172 aa		21.04	■□□□□ 0.96
GCFC2-208	ENST00000472230	DALRD3	Q5D0E6	543 aa	Known RBP	21.04	■□□□□ 0.96
GCFC2-208	ENST00000472230	AXDND1	Q5T1B0	1012 aa	Predicted RBP	21.04	■□□□□ 0.96
GCFC2-208	ENST00000472230	FMR1NB	Q8N0W7	255 aa	Predicted RBP	21.04	■□□□□ 0.96
GCFC2-208	ENST00000472230	TMOD2	Q9NZR1	351 aa		21.04	■□□□□ 0.96
GCFC2-208	ENST00000472230	PPP1R1B	Q9UD71	204 aa	Predicted RBP	21.04	■□□□□ 0.96
GCFC2-208	ENST00000472230	BAZ2B	Q9UIF8	2168 aa	Known RBP	21.04	■□□□□ 0.96
GCFC2-208	ENST00000472230	PSMD14	O00487	310 aa		21.03	■□□□□ 0.96
GCFC2-208	ENST00000472230	TTLL1	O95922	423 aa		21.03	■□□□□ 0.96
GCFC2-208	ENST00000472230	IGKV6D-41	A0A0C4DH26	115 aa		21.03	■□□□□ 0.96
GCFC2-208	ENST00000472230	VIL1	P09327	827 aa	Known RBP	21.03	■□□□□ 0.96
GCFC2-208	ENST00000472230	USP17L2	Q6R6M4	530 aa		21.03	■□□□□ 0.96
GCFC2-208	ENST00000472230	OGFOD1	Q8N543	542 aa		21.03	■□□□□ 0.96
GCFC2-208	ENST00000472230	SPZ1	Q9BXG8	430 aa		21.03	■□□□□ 0.96
GCFC2-208	ENST00000472230	CLIP2	Q9UDT6	1046 aa		21.03	■□□□□ 0.96
GCFC2-208	ENST00000472230	EIF6	P56537	245 aa	Known RBP	21.02	■□□□□ 0.96
GCFC2-208	ENST00000472230	KRI1	Q8N9T8	703 aa	Known RBP	21.02	■□□□□ 0.96
GCFC2-208	ENST00000472230	CCDC148	Q8NFR7	591 aa		21.02	■□□□□ 0.96
GCFC2-208	ENST00000472230	SDF4	Q9BRK5	362 aa		21.02	■□□□□ 0.96
GCFC2-208	ENST00000472230	ZNRF3	Q9ULT6	936 aa		21.02	■□□□□ 0.96
GCFC2-208	ENST00000472230	DDTL	A6NHG4	134 aa	Predicted RBP	21.02	■□□□□ 0.95
GCFC2-208	ENST00000472230	TRIM75P	A6NK02	468 aa		21.02	■□□□□ 0.95
GCFC2-208	ENST00000472230	ENTPD3	O75355	529 aa		21.02	■□□□□ 0.95
GCFC2-208	ENST00000472230	LRRC47	Q8N1G4	583 aa	Known RBP	21.02	■□□□□ 0.95
GCFC2-208	ENST00000472230	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	21.02	■□□□□ 0.95
GCFC2-208	ENST00000472230	TRIM44	Q96DX7	344 aa	Predicted RBP	21.02	■□□□□ 0.95
GCFC2-208	ENST00000472230	PRMT6	Q96LA8	375 aa	Predicted RBP	21.02	■□□□□ 0.95
GCFC2-208	ENST00000472230	PPP1R9B	Q96SB3	815 aa		21.02	■□□□□ 0.95
GCFC2-208	ENST00000472230	PCDHB6	Q9Y5E3	794 aa		21.02	■□□□□ 0.95
GCFC2-208	ENST00000472230	PFKFB1	P16118	471 aa		21.01	■□□□□ 0.95
GCFC2-208	ENST00000472230	HEATR3	Q7Z4Q2	680 aa		21.01	■□□□□ 0.95
GCFC2-208	ENST00000472230	FOXP4	Q8IVH2	680 aa	Predicted RBP	21.01	■□□□□ 0.95
GCFC2-208	ENST00000472230	SIPA1L1	O43166	1804 aa		21.01	■□□□□ 0.95
GCFC2-208	ENST00000472230	CYTH3	O43739	400 aa		21.01	■□□□□ 0.95
GCFC2-208	ENST00000472230	SMARCA1	P28370	1054 aa		21.01	■□□□□ 0.95
GCFC2-208	ENST00000472230	ATP2B2	Q01814	1243 aa		21.01	■□□□□ 0.95
GCFC2-208	ENST00000472230	R3HDM1	Q15032	1099 aa	Known RBP	21.01	■□□□□ 0.95
GCFC2-208	ENST00000472230	DLGAP5	Q15398	846 aa		21.01	■□□□□ 0.95
GCFC2-208	ENST00000472230	RRP36	Q96EU6	259 aa	Known RBP	21.01	■□□□□ 0.95
GCFC2-208	ENST00000472230	SEC63	Q9UGP8	760 aa	Known RBP	21.01	■□□□□ 0.95
GCFC2-208	ENST00000472230	MRVI1	Q9Y6F6	885 aa		21.01	■□□□□ 0.95
GCFC2-208	ENST00000472230	USP17L5	A8MUK1	530 aa		21	■□□□□ 0.95
GCFC2-208	ENST00000472230	CERKL	Q49MI3	558 aa	Predicted RBP	21	■□□□□ 0.95
GCFC2-208	ENST00000472230	ASPRV1	Q53RT3	343 aa		21	■□□□□ 0.95
GCFC2-208	ENST00000472230	BLID	Q8IZY5	108 aa		21	■□□□□ 0.95
GCFC2-208	ENST00000472230	GREB1L	Q9C091	1923 aa	Predicted RBP	21	■□□□□ 0.95
GCFC2-208	ENST00000472230	MYH4	Q9Y623	1939 aa		21	■□□□□ 0.95
GCFC2-208	ENST00000472230	FAM205C	A6NFA0	338 aa		20.99	■□□□□ 0.95
GCFC2-208	ENST00000472230	ZNF202	O95125	648 aa		20.99	■□□□□ 0.95
GCFC2-208	ENST00000472230	BMP15	O95972	392 aa		20.99	■□□□□ 0.95
GCFC2-208	ENST00000472230	PDHB	P11177	359 aa		20.99	■□□□□ 0.95
GCFC2-208	ENST00000472230	VEGFA	P15692	232 aa	Predicted RBP	20.99	■□□□□ 0.95
GCFC2-208	ENST00000472230	NPY5R	Q15761	445 aa		20.99	■□□□□ 0.95
GCFC2-208	ENST00000472230	RASGRP2	Q7LDG7	609 aa		20.99	■□□□□ 0.95

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms