RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.82□□□□□ -0.2
COL4A3-205ENST00000471862 CRISPLD2Q9H0B8 497 aa13.82□□□□□ -0.2
COL4A3-205ENST00000471862 ARHGEF10LQ9HCE6 1279 aa13.82□□□□□ -0.2
COL4A3-205ENST00000471862 BTBD7Q9P203 1132 aa13.82□□□□□ -0.2
COL4A3-205ENST00000471862 STAP2Q9UGK3 403 aa13.82□□□□□ -0.2
COL4A3-205ENST00000471862 ZNF236Q9UL36 1845 aa13.81□□□□□ -0.2
COL4A3-205ENST00000471862 CAPN2P17655 700 aa13.81□□□□□ -0.2
COL4A3-205ENST00000471862 GNAT2P19087 354 aa13.81□□□□□ -0.2
COL4A3-205ENST00000471862 CYP2B6P20813 491 aa13.81□□□□□ -0.2
COL4A3-205ENST00000471862 TRIM32Q13049 653 aa13.81□□□□□ -0.2
COL4A3-205ENST00000471862 LRRFIP1Q32MZ4 808 aaKnown RBP13.81□□□□□ -0.2
COL4A3-205ENST00000471862 ZMYM1Q5SVZ6 1142 aa13.81□□□□□ -0.2
COL4A3-205ENST00000471862 MAP3K21Q5TCX8 1036 aa13.81□□□□□ -0.2
COL4A3-205ENST00000471862 ANKRD45Q5TZF3 282 aa13.81□□□□□ -0.2
COL4A3-205ENST00000471862 PLEKHH3Q7Z736 793 aa13.81□□□□□ -0.2
COL4A3-205ENST00000471862 LPAR1Q92633 364 aa13.81□□□□□ -0.2
COL4A3-205ENST00000471862 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.81□□□□□ -0.2
COL4A3-205ENST00000471862 VCPKMTQ9H867 229 aa13.81□□□□□ -0.2
COL4A3-205ENST00000471862 RASA1P20936 1047 aa13.8□□□□□ -0.2
COL4A3-205ENST00000471862 CCNA1P78396 465 aa13.8□□□□□ -0.2
COL4A3-205ENST00000471862 COG2Q14746 738 aa13.8□□□□□ -0.2
COL4A3-205ENST00000471862 SEC62Q99442 399 aaKnown RBP13.8□□□□□ -0.2
COL4A3-205ENST00000471862 FSD1Q9BTV5 496 aa13.8□□□□□ -0.2
COL4A3-205ENST00000471862 SH2D4AQ9H788 454 aa13.8□□□□□ -0.2
COL4A3-205ENST00000471862 KANSL2Q9H9L4 492 aa13.8□□□□□ -0.2
COL4A3-205ENST00000471862 COL11A1P12107 1806 aaPredicted RBP13.8□□□□□ -0.2
COL4A3-205ENST00000471862 PATL2C9JE40 543 aaKnown RBP13.79□□□□□ -0.2
COL4A3-205ENST00000471862 WDR46O15213 610 aaKnown RBP13.79□□□□□ -0.2
COL4A3-205ENST00000471862 SLC34A2O95436 690 aa13.79□□□□□ -0.2
COL4A3-205ENST00000471862 EEF2P13639 858 aaKnown RBP13.79□□□□□ -0.2
COL4A3-205ENST00000471862 DSG3P32926 999 aa13.79□□□□□ -0.2
COL4A3-205ENST00000471862 RGS2P41220 211 aa13.79□□□□□ -0.2
COL4A3-205ENST00000471862 PDE1AP54750 535 aa13.79□□□□□ -0.2
COL4A3-205ENST00000471862 MAP2K5Q13163 448 aa13.79□□□□□ -0.2
COL4A3-205ENST00000471862 SMC5Q8IY18 1101 aa13.79□□□□□ -0.2
COL4A3-205ENST00000471862 IFNL3Q8IZI9 196 aa13.79□□□□□ -0.2
COL4A3-205ENST00000471862 DEFB118Q96PH6 123 aa13.79□□□□□ -0.2
COL4A3-205ENST00000471862 APBA2Q99767 749 aa13.79□□□□□ -0.2
COL4A3-205ENST00000471862 HOXC10Q9NYD6 342 aa13.79□□□□□ -0.2
COL4A3-205ENST00000471862 ALPK3Q96L96 1907 aa13.79□□□□□ -0.2
COL4A3-205ENST00000471862 MYH4Q9Y623 1939 aa13.79□□□□□ -0.2
COL4A3-205ENST00000471862 RPTORQ8N122 1335 aa13.79□□□□□ -0.2
COL4A3-205ENST00000471862 CEP290O15078 2479 aa13.78□□□□□ -0.2
COL4A3-205ENST00000471862 IGKV6D-41A0A0C4DH26 115 aa13.78□□□□□ -0.2
COL4A3-205ENST00000471862 MINDY4BA8MYZ0 360 aa13.78□□□□□ -0.2
COL4A3-205ENST00000471862 FOXP2O15409 715 aa13.78□□□□□ -0.2
COL4A3-205ENST00000471862 FARP2O94887 1054 aaPredicted RBP13.78□□□□□ -0.2
COL4A3-205ENST00000471862 PTPREP23469 700 aa13.78□□□□□ -0.2
COL4A3-205ENST00000471862 TDO2P48775 406 aa13.78□□□□□ -0.2
COL4A3-205ENST00000471862 GRB14Q14449 540 aa13.78□□□□□ -0.2
COL4A3-205ENST00000471862 CCL14Q16627 93 aa13.78□□□□□ -0.2
COL4A3-205ENST00000471862 CCAR1Q8IX12 1150 aaKnown RBP13.78□□□□□ -0.2
COL4A3-205ENST00000471862 TRMT44Q8IYL2 757 aaKnown RBP13.78□□□□□ -0.2
COL4A3-205ENST00000471862 SPICE1Q8N0Z3 855 aa13.78□□□□□ -0.2
COL4A3-205ENST00000471862 TANGO6Q9C0B7 1094 aa13.78□□□□□ -0.2
COL4A3-205ENST00000471862 HMX1Q9NP08 348 aaPredicted RBP13.78□□□□□ -0.2
COL4A3-205ENST00000471862 FRMPD3Q5JV73 1810 aa13.78□□□□□ -0.2
COL4A3-205ENST00000471862 SLC15A5A6NIM6 579 aa13.77□□□□□ -0.21
COL4A3-205ENST00000471862 IGHA2P01877 340 aa13.77□□□□□ -0.21
COL4A3-205ENST00000471862 HOXC6P09630 235 aa13.77□□□□□ -0.21
COL4A3-205ENST00000471862 ZKSCAN1P17029 563 aaPredicted RBP13.77□□□□□ -0.21
COL4A3-205ENST00000471862 MB21D1Q8N884 522 aa13.77□□□□□ -0.21
COL4A3-205ENST00000471862 SHCBP1Q8NEM2 672 aa13.77□□□□□ -0.21
COL4A3-205ENST00000471862 ATG4CQ96DT6 458 aa13.77□□□□□ -0.21
COL4A3-205ENST00000471862 PLIN4Q96Q06 1357 aa13.77□□□□□ -0.21
COL4A3-205ENST00000471862 MOV10L1Q9BXT6 1211 aaKnown RBP13.77□□□□□ -0.21
COL4A3-205ENST00000471862 SPATC1LQ9H0A9 340 aa13.77□□□□□ -0.21
COL4A3-205ENST00000471862 MKNK2Q9HBH9 465 aa13.77□□□□□ -0.21
COL4A3-205ENST00000471862 NYAP2Q9P242 653 aa13.77□□□□□ -0.21
COL4A3-205ENST00000471862 ZBTB47Q9UFB7 747 aaPredicted RBP13.77□□□□□ -0.21
COL4A3-205ENST00000471862 ADAMTS5Q9UNA0 930 aa13.77□□□□□ -0.21
COL4A3-205ENST00000471862 ZNFX1Q9P2E3 1918 aaKnown RBP13.76□□□□□ -0.21
COL4A3-205ENST00000471862 FLOT1O75955 427 aa13.76□□□□□ -0.21
COL4A3-205ENST00000471862 TFRCP02786 760 aaKnown RBP13.76□□□□□ -0.21
COL4A3-205ENST00000471862 PRKAR2AP13861 404 aaKnown RBP13.76□□□□□ -0.21
COL4A3-205ENST00000471862 CACNB2Q08289 660 aaPredicted RBP13.76□□□□□ -0.21
COL4A3-205ENST00000471862 STK11IPQ8N1F8 1099 aa13.76□□□□□ -0.21
COL4A3-205ENST00000471862 EXOC6Q8TAG9 804 aa13.76□□□□□ -0.21
COL4A3-205ENST00000471862 EVI5LQ96CN4 794 aa13.76□□□□□ -0.21
COL4A3-205ENST00000471862 FLRT1Q9NZU1 646 aa13.76□□□□□ -0.21
COL4A3-205ENST00000471862 IGHDP01880 384 aa13.75□□□□□ -0.21
COL4A3-205ENST00000471862 APPP05067 770 aa13.75□□□□□ -0.21
COL4A3-205ENST00000471862 MNX1P50219 401 aaPredicted RBP13.75□□□□□ -0.21
COL4A3-205ENST00000471862 ATP2B2Q01814 1243 aa13.75□□□□□ -0.21
COL4A3-205ENST00000471862 CCDC129Q6ZRS4 1044 aa13.75□□□□□ -0.21
COL4A3-205ENST00000471862 ANKLE1Q8NAG6 615 aa13.75□□□□□ -0.21
COL4A3-205ENST00000471862 NPLOC4Q8TAT6 608 aa13.75□□□□□ -0.21
COL4A3-205ENST00000471862 HTATIP2Q9BUP3 242 aa13.75□□□□□ -0.21
COL4A3-205ENST00000471862 NACAP1Q9BZK3 213 aa13.75□□□□□ -0.21
COL4A3-205ENST00000471862 LNPKQ9C0E8 428 aa13.75□□□□□ -0.21
COL4A3-205ENST00000471862 NAPBQ9H115 298 aa13.75□□□□□ -0.21
COL4A3-205ENST00000471862 CWC22Q9HCG8 908 aaKnown RBP13.75□□□□□ -0.21
COL4A3-205ENST00000471862 GOPCQ9HD26 462 aa13.75□□□□□ -0.21
COL4A3-205ENST00000471862 FBXO28Q9NVF7 368 aa13.75□□□□□ -0.21
COL4A3-205ENST00000471862 OGDHLQ9ULD0 1010 aa13.75□□□□□ -0.21
COL4A3-205ENST00000471862 PRDM1O75626 825 aa13.74□□□□□ -0.21
COL4A3-205ENST00000471862 ERCC3P19447 782 aa13.74□□□□□ -0.21
COL4A3-205ENST00000471862 PPARAQ07869 468 aa13.74□□□□□ -0.21
COL4A3-205ENST00000471862 TMEM132BQ14DG7 1078 aa13.74□□□□□ -0.21
COL4A3-205ENST00000471862 FAM83BQ5T0W9 1011 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms