RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 RIOK3O14730 519 aaKnown RBP12.11□□□□□ -0.47
APLF-204ENST00000471727 ATP2B1P20020 1258 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 SMARCA1P28370 1054 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 NPY5RQ15761 445 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 CFAP100Q494V2 611 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 PRR5LQ6MZQ0 368 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 NYAP1Q6ZVC0 841 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 FCHSD1Q86WN1 690 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 VSTM4Q8IW00 320 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 DAGLBQ8NCG7 672 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 PNMA1Q8ND90 353 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 C16orf45Q96MC5 204 aaPredicted RBP12.11□□□□□ -0.47
APLF-204ENST00000471727 CRAMP1Q96RY5 1269 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 HSD3B7Q9H2F3 369 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 CD209Q9NNX6 404 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 TRPC5Q9UL62 973 aaPredicted RBP12.11□□□□□ -0.47
APLF-204ENST00000471727 GPR75-ASB3A0A0A6YYF3 556 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 SMIM22K7EJ46 135 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 USP17L8P0C7I0 530 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 TSPY3P0CV98 308 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 TSPY8P0CW00 308 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 CYP2D6P10635 497 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 TOP1P11387 765 aaKnown RBP12.11□□□□□ -0.47
APLF-204ENST00000471727 HOXA10P31260 410 aaPredicted RBP12.11□□□□□ -0.47
APLF-204ENST00000471727 LONP1P36776 959 aaKnown RBP12.11□□□□□ -0.47
APLF-204ENST00000471727 PLCD1P51178 756 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 GRIN1Q05586 938 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 SPECC1Q5M775 1068 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 MEX3CQ5U5Q3 659 aaKnown RBP12.11□□□□□ -0.47
APLF-204ENST00000471727 ISM2Q6H9L7 571 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 SMIM5Q71RC9 77 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 BLIDQ8IZY5 108 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 IQUBQ8NA54 791 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 SHISA4Q96DD7 197 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 FANCLQ9NW38 375 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 PCDHA4Q9UN74 947 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 SUGT1Q9Y2Z0 365 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 LAMB1P07942 1786 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 CASZ1Q86V15 1759 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 CCDC88AQ3V6T2 1871 aa12.11□□□□□ -0.47
APLF-204ENST00000471727 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.1□□□□□ -0.47
APLF-204ENST00000471727 LAD1O00515 517 aa12.1□□□□□ -0.47
APLF-204ENST00000471727 SERPINB2P05120 415 aa12.1□□□□□ -0.47
APLF-204ENST00000471727 ZNF18P17022 549 aa12.1□□□□□ -0.47
APLF-204ENST00000471727 CDK11BP21127 795 aaKnown RBP12.1□□□□□ -0.47
APLF-204ENST00000471727 HOXD11P31277 338 aaPredicted RBP12.1□□□□□ -0.47
APLF-204ENST00000471727 TXLNAP40222 546 aa12.1□□□□□ -0.47
APLF-204ENST00000471727 PTGDRQ13258 359 aa12.1□□□□□ -0.47
APLF-204ENST00000471727 KIF18AQ8NI77 898 aa12.1□□□□□ -0.47
APLF-204ENST00000471727 SH3RF3Q8TEJ3 882 aaPredicted RBP12.1□□□□□ -0.47
APLF-204ENST00000471727 CCDC12Q8WUD4 166 aaPredicted RBP12.1□□□□□ -0.47
APLF-204ENST00000471727 CTAGE1Q96RT6 745 aa12.1□□□□□ -0.47
APLF-204ENST00000471727 MYH13Q9UKX3 1938 aa12.1□□□□□ -0.47
APLF-204ENST00000471727 TAF1LQ8IZX4 1826 aa12.09□□□□□ -0.47
APLF-204ENST00000471727 BMP6P22004 513 aa12.09□□□□□ -0.47
APLF-204ENST00000471727 GPSM2P81274 684 aa12.09□□□□□ -0.47
APLF-204ENST00000471727 RBM10P98175 930 aaKnown RBP12.09□□□□□ -0.47
APLF-204ENST00000471727 ARID5BQ14865 1188 aa12.09□□□□□ -0.47
APLF-204ENST00000471727 ZNF174Q15697 407 aa12.09□□□□□ -0.47
APLF-204ENST00000471727 SPATA1Q5VX52 437 aa12.09□□□□□ -0.47
APLF-204ENST00000471727 ARMCX5Q6P1M9 558 aa12.09□□□□□ -0.47
APLF-204ENST00000471727 CCDC24Q8N4L8 307 aa12.09□□□□□ -0.47
APLF-204ENST00000471727 SYMPKQ92797 1274 aaKnown RBP12.09□□□□□ -0.47
APLF-204ENST00000471727 DHX58Q96C10 678 aa12.09□□□□□ -0.47
APLF-204ENST00000471727 PAGE5Q96GU1 130 aa12.09□□□□□ -0.47
APLF-204ENST00000471727 RTFDC1Q9BY42 306 aaPredicted RBP12.09□□□□□ -0.47
APLF-204ENST00000471727 TMX1Q9H3N1 280 aa12.09□□□□□ -0.47
APLF-204ENST00000471727 NFE2L3Q9Y4A8 694 aa12.09□□□□□ -0.47
APLF-204ENST00000471727 TAF1P21675 1872 aa12.09□□□□□ -0.47
APLF-204ENST00000471727 MYH2Q9UKX2 1941 aa12.09□□□□□ -0.47
APLF-204ENST00000471727 KLRG2A4D1S0 409 aaPredicted RBP12.08□□□□□ -0.48
APLF-204ENST00000471727 GOLGA6L9A6NEM1 432 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 FOXN1O15353 648 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 NMT2O60551 498 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 UFL1O94874 794 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 MYL1P05976 194 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 PRR29P0C7W0 189 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 ATP1A3P13637 1013 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 GYS1P13807 737 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 DPYDQ12882 1025 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 ORC2Q13416 577 aaPredicted RBP12.08□□□□□ -0.48
APLF-204ENST00000471727 EARS2Q5JPH6 523 aaKnown RBP12.08□□□□□ -0.48
APLF-204ENST00000471727 PPP4R3CPQ6ZMV5 832 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 C16orf86Q6ZW13 317 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 AMIGO3Q86WK7 504 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 SEPT12Q8IYM1 358 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 PDILTQ8N807 584 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 NEDD1Q8NHV4 660 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 TGFBRAP1Q8WUH2 860 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 SPZ1Q9BXG8 430 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 GTPBP4Q9BZE4 634 aaKnown RBP12.08□□□□□ -0.48
APLF-204ENST00000471727 IL17RBQ9NRM6 502 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 RMND1Q9NWS8 449 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 BAZ2AQ9UIF9 1905 aaKnown RBP12.08□□□□□ -0.48
APLF-204ENST00000471727 FAM205AQ6ZU69 1335 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 hCG_1642624A0A1W2PR95 340 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 PALM3A6NDB9 673 aaPredicted RBP12.08□□□□□ -0.48
APLF-204ENST00000471727 ZSCAN12O43309 604 aa12.08□□□□□ -0.48
APLF-204ENST00000471727 GTPBP6O43824 516 aaPredicted RBP12.08□□□□□ -0.48
APLF-204ENST00000471727 BTDP43251 543 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms