RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 LRRN2O75325 713 aa6.22□□□□□ -1.41
PRPF40A-207ENST00000471701 HTR3BO95264 441 aa6.22□□□□□ -1.41
PRPF40A-207ENST00000471701 HPXP02790 462 aa6.22□□□□□ -1.41
PRPF40A-207ENST00000471701 ERVFC1P60507 584 aa6.22□□□□□ -1.41
PRPF40A-207ENST00000471701 GAB4Q2WGN9 574 aa6.22□□□□□ -1.41
PRPF40A-207ENST00000471701 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
PRPF40A-207ENST00000471701 SPPL2CQ8IUH8 684 aa6.22□□□□□ -1.41
PRPF40A-207ENST00000471701 RHOVQ96L33 236 aa6.22□□□□□ -1.41
PRPF40A-207ENST00000471701 KREMEN1Q96MU8 473 aa6.22□□□□□ -1.41
PRPF40A-207ENST00000471701 TSPAN15O95858 294 aa6.21□□□□□ -1.42
PRPF40A-207ENST00000471701 CWF19L2Q2TBE0 894 aaKnown RBP6.21□□□□□ -1.42
PRPF40A-207ENST00000471701 FBLN7Q53RD9 439 aa6.21□□□□□ -1.42
PRPF40A-207ENST00000471701 ZNF326Q5BKZ1 582 aaKnown RBP6.21□□□□□ -1.42
PRPF40A-207ENST00000471701 PDZD8Q8NEN9 1154 aa6.21□□□□□ -1.42
PRPF40A-207ENST00000471701 KCNN1Q92952 543 aa6.21□□□□□ -1.42
PRPF40A-207ENST00000471701 KIF2CQ99661 725 aa6.21□□□□□ -1.42
PRPF40A-207ENST00000471701 ASPNQ9BXN1 380 aa6.21□□□□□ -1.42
PRPF40A-207ENST00000471701 EPB41L4BQ9H329 900 aa6.21□□□□□ -1.42
PRPF40A-207ENST00000471701 POLR3KQ9Y2Y1 108 aaPredicted RBP6.21□□□□□ -1.42
PRPF40A-207ENST00000471701 FAM196AQ6ZSG2 479 aa6.2□□□□□ -1.42
PRPF40A-207ENST00000471701 REC114Q7Z4M0 266 aa6.2□□□□□ -1.42
PRPF40A-207ENST00000471701 LILRA2Q8N149 483 aa6.2□□□□□ -1.42
PRPF40A-207ENST00000471701 PCDHA11Q9Y5I1 949 aa6.2□□□□□ -1.42
PRPF40A-207ENST00000471701 FITM1A5D6W6 292 aa6.19□□□□□ -1.42
PRPF40A-207ENST00000471701 TLR3O15455 904 aaKnown RBP6.19□□□□□ -1.42
PRPF40A-207ENST00000471701 C1QTNF9P0C862 333 aa6.19□□□□□ -1.42
PRPF40A-207ENST00000471701 CFPP27918 469 aa6.19□□□□□ -1.42
PRPF40A-207ENST00000471701 TRHRP34981 398 aaPredicted RBP6.19□□□□□ -1.42
PRPF40A-207ENST00000471701 EIF4A3P38919 411 aaKnown RBP6.19□□□□□ -1.42
PRPF40A-207ENST00000471701 DUSP4Q13115 394 aa6.19□□□□□ -1.42
PRPF40A-207ENST00000471701 FBXO27Q8NI29 283 aa6.19□□□□□ -1.42
PRPF40A-207ENST00000471701 ENOX1Q8TC92 643 aaKnown RBP6.19□□□□□ -1.42
PRPF40A-207ENST00000471701 SLC26A8Q96RN1 970 aa6.19□□□□□ -1.42
PRPF40A-207ENST00000471701 KBTBD4Q9NVX7 518 aa6.19□□□□□ -1.42
PRPF40A-207ENST00000471701 SUPT16HQ9Y5B9 1047 aaKnown RBP6.19□□□□□ -1.42
PRPF40A-207ENST00000471701 SSU72P8A0A1W2PR75 194 aa6.18□□□□□ -1.42
PRPF40A-207ENST00000471701 SLC22A31A6NKX4 558 aa6.18□□□□□ -1.42
PRPF40A-207ENST00000471701 RGS13O14921 159 aa6.18□□□□□ -1.42
PRPF40A-207ENST00000471701 ZGLP1P0C6A0 271 aa6.18□□□□□ -1.42
PRPF40A-207ENST00000471701 RAG1P15918 1043 aa6.18□□□□□ -1.42
PRPF40A-207ENST00000471701 FBXL19Q6PCT2 694 aa6.18□□□□□ -1.42
PRPF40A-207ENST00000471701 BCL2L13Q9BXK5 485 aa6.18□□□□□ -1.42
PRPF40A-207ENST00000471701 C19orf44Q9H6X5 657 aa6.18□□□□□ -1.42
PRPF40A-207ENST00000471701 RBM47A0AV96 593 aaKnown RBP6.17□□□□□ -1.42
PRPF40A-207ENST00000471701 TCAF2A6NFQ2 919 aa6.17□□□□□ -1.42
PRPF40A-207ENST00000471701 RNF4P78317 190 aa6.17□□□□□ -1.42
PRPF40A-207ENST00000471701 CHRNEQ04844 493 aa6.17□□□□□ -1.42
PRPF40A-207ENST00000471701 SNX17Q15036 470 aa6.17□□□□□ -1.42
PRPF40A-207ENST00000471701 ARSHQ5FYA8 562 aa6.17□□□□□ -1.42
PRPF40A-207ENST00000471701 LRRC56Q8IYG6 542 aaPredicted RBP6.17□□□□□ -1.42
PRPF40A-207ENST00000471701 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.17□□□□□ -1.42
PRPF40A-207ENST00000471701 SLC6A17Q9H1V8 727 aa6.17□□□□□ -1.42
PRPF40A-207ENST00000471701 KCNK12Q9HB15 430 aa6.17□□□□□ -1.42
PRPF40A-207ENST00000471701 CWC22Q9HCG8 908 aaKnown RBP6.17□□□□□ -1.42
PRPF40A-207ENST00000471701 BRMS1Q9HCU9 246 aa6.17□□□□□ -1.42
PRPF40A-207ENST00000471701 COPRSQ9NQ92 184 aa6.17□□□□□ -1.42
PRPF40A-207ENST00000471701 GGT7Q9UJ14 662 aa6.17□□□□□ -1.42
PRPF40A-207ENST00000471701 PCDHB14Q9Y5E9 798 aa6.17□□□□□ -1.42
PRPF40A-207ENST00000471701 GARTP22102 1010 aa6.16□□□□□ -1.42
PRPF40A-207ENST00000471701 NR0B2Q15466 257 aa6.16□□□□□ -1.42
PRPF40A-207ENST00000471701 TMEM132EQ6IEE7 984 aa6.16□□□□□ -1.42
PRPF40A-207ENST00000471701 ATG14Q6ZNE5 492 aa6.16□□□□□ -1.42
PRPF40A-207ENST00000471701 ERMP1Q7Z2K6 904 aa6.16□□□□□ -1.42
PRPF40A-207ENST00000471701 SIAH1Q8IUQ4 282 aa6.16□□□□□ -1.42
PRPF40A-207ENST00000471701 ZNF296Q8WUU4 475 aaPredicted RBP6.16□□□□□ -1.42
PRPF40A-207ENST00000471701 RNF32Q9H0A6 362 aa6.16□□□□□ -1.42
PRPF40A-207ENST00000471701 ZMYM5Q9UJ78 669 aa6.16□□□□□ -1.42
PRPF40A-207ENST00000471701 NPIPB6E9PJ23 425 aa6.15□□□□□ -1.42
PRPF40A-207ENST00000471701 ETV2O00321 342 aaPredicted RBP6.15□□□□□ -1.42
PRPF40A-207ENST00000471701 GREM1O60565 184 aa6.15□□□□□ -1.42
PRPF40A-207ENST00000471701 DNAJA2O60884 412 aa6.15□□□□□ -1.42
PRPF40A-207ENST00000471701 ATE1O95260 518 aa6.15□□□□□ -1.42
PRPF40A-207ENST00000471701 RPL10P27635 214 aaKnown RBP6.15□□□□□ -1.42
PRPF40A-207ENST00000471701 MCM4P33991 863 aa6.15□□□□□ -1.42
PRPF40A-207ENST00000471701 RAD51AP2Q09MP3 1159 aa6.15□□□□□ -1.42
PRPF40A-207ENST00000471701 NMIQ13287 307 aaPredicted RBP6.15□□□□□ -1.42
PRPF40A-207ENST00000471701 SPOCD1Q6ZMY3 1216 aa6.15□□□□□ -1.42
PRPF40A-207ENST00000471701 HS2ST1Q7LGA3 356 aa6.15□□□□□ -1.42
PRPF40A-207ENST00000471701 ANKS4BQ8N8V4 417 aa6.15□□□□□ -1.42
PRPF40A-207ENST00000471701 VWCEQ96DN2 955 aa6.15□□□□□ -1.42
PRPF40A-207ENST00000471701 GMIPQ9P107 970 aa6.15□□□□□ -1.42
PRPF40A-207ENST00000471701 GPR160Q9UJ42 338 aa6.15□□□□□ -1.42
PRPF40A-207ENST00000471701 SHISA3A0PJX4 238 aa6.14□□□□□ -1.43
PRPF40A-207ENST00000471701 ZSCAN22P10073 491 aaPredicted RBP6.14□□□□□ -1.43
PRPF40A-207ENST00000471701 PDE6BP35913 854 aa6.14□□□□□ -1.43
PRPF40A-207ENST00000471701 TEKQ02763 1124 aa6.14□□□□□ -1.43
PRPF40A-207ENST00000471701 SLC14A2Q15849 920 aa6.14□□□□□ -1.43
PRPF40A-207ENST00000471701 KCNA10Q16322 511 aa6.14□□□□□ -1.43
PRPF40A-207ENST00000471701 LCE1DQ5T752 114 aa6.14□□□□□ -1.43
PRPF40A-207ENST00000471701 RNF111Q6ZNA4 994 aa6.14□□□□□ -1.43
PRPF40A-207ENST00000471701 IRF2BP1Q8IU81 584 aa6.14□□□□□ -1.43
PRPF40A-207ENST00000471701 USHBP1Q8N6Y0 703 aa6.14□□□□□ -1.43
PRPF40A-207ENST00000471701 DAGLBQ8NCG7 672 aa6.14□□□□□ -1.43
PRPF40A-207ENST00000471701 SYTL5Q8TDW5 730 aaPredicted RBP6.14□□□□□ -1.43
PRPF40A-207ENST00000471701 GIPC2Q8TF65 315 aa6.14□□□□□ -1.43
PRPF40A-207ENST00000471701 LRRC3Q9BY71 257 aa6.14□□□□□ -1.43
PRPF40A-207ENST00000471701 SP110Q9HB58 689 aa6.14□□□□□ -1.43
PRPF40A-207ENST00000471701 KCNQ5Q9NR82 932 aa6.14□□□□□ -1.43
PRPF40A-207ENST00000471701 KRT1P04264 644 aa6.13□□□□□ -1.43
PRPF40A-207ENST00000471701 GLDCP23378 1020 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms