RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 CATIPQ7Z7H3 387 aa22.46■■□□□ 1.19
PSPC1-203ENST00000471658 ANKRD13AQ8IZ07 590 aa22.46■■□□□ 1.19
PSPC1-203ENST00000471658 RBM46Q8TBY0 533 aaKnown RBP22.46■■□□□ 1.19
PSPC1-203ENST00000471658 ZSCAN31Q96LW9 406 aaPredicted RBP22.46■■□□□ 1.19
PSPC1-203ENST00000471658 NCOA5Q9HCD5 579 aaKnown RBP22.46■■□□□ 1.19
PSPC1-203ENST00000471658 DOCK1Q14185 1865 aa22.46■■□□□ 1.19
PSPC1-203ENST00000471658 PAPPA2Q9BXP8 1791 aa22.46■■□□□ 1.19
PSPC1-203ENST00000471658 OTOFQ9HC10 1997 aa22.46■■□□□ 1.19
PSPC1-203ENST00000471658 ZBTB43O43298 467 aa22.46■■□□□ 1.19
PSPC1-203ENST00000471658 SYNE3Q6ZMZ3 975 aa22.46■■□□□ 1.19
PSPC1-203ENST00000471658 C2orf69Q8N8R5 385 aa22.46■■□□□ 1.19
PSPC1-203ENST00000471658 ZHX2Q9Y6X8 837 aa22.46■■□□□ 1.19
PSPC1-203ENST00000471658 PFKFB2O60825 505 aa22.45■■□□□ 1.18
PSPC1-203ENST00000471658 SCRN1Q12765 414 aa22.45■■□□□ 1.18
PSPC1-203ENST00000471658 ZYXQ15942 572 aaKnown RBP22.45■■□□□ 1.18
PSPC1-203ENST00000471658 KIAA1755Q5JYT7 1200 aa22.45■■□□□ 1.18
PSPC1-203ENST00000471658 CCDC83Q8IWF9 413 aa22.45■■□□□ 1.18
PSPC1-203ENST00000471658 SLKQ9H2G2 1235 aaPredicted RBP22.45■■□□□ 1.18
PSPC1-203ENST00000471658 ARHGEF10LQ9HCE6 1279 aa22.45■■□□□ 1.18
PSPC1-203ENST00000471658 RAD21O60216 631 aa22.44■■□□□ 1.18
PSPC1-203ENST00000471658 CDC27P30260 824 aa22.44■■□□□ 1.18
PSPC1-203ENST00000471658 SPP2Q13103 211 aa22.44■■□□□ 1.18
PSPC1-203ENST00000471658 DGKZQ13574 1117 aa22.44■■□□□ 1.18
PSPC1-203ENST00000471658 PPP4R3BQ5MIZ7 849 aa22.44■■□□□ 1.18
PSPC1-203ENST00000471658 FAM217BQ9NTX9 383 aaPredicted RBP22.44■■□□□ 1.18
PSPC1-203ENST00000471658 TMX2Q9Y320 296 aa22.44■■□□□ 1.18
PSPC1-203ENST00000471658 GOLGA8AA7E2F4 631 aa22.43■■□□□ 1.18
PSPC1-203ENST00000471658 METAP2P50579 478 aaKnown RBP eCLIP22.43■■□□□ 1.18
PSPC1-203ENST00000471658 BECN1Q14457 450 aa22.43■■□□□ 1.18
PSPC1-203ENST00000471658 TRIM75PA6NK02 468 aa22.42■■□□□ 1.18
PSPC1-203ENST00000471658 DDAH1O94760 285 aa22.42■■□□□ 1.18
PSPC1-203ENST00000471658 ADD1P35611 737 aaKnown RBP22.42■■□□□ 1.18
PSPC1-203ENST00000471658 FKBP1BP68106 108 aa22.42■■□□□ 1.18
PSPC1-203ENST00000471658 USP17L2Q6R6M4 530 aa22.42■■□□□ 1.18
PSPC1-203ENST00000471658 FANCBQ8NB91 859 aa22.42■■□□□ 1.18
PSPC1-203ENST00000471658 SPRYD3Q8NCJ5 442 aa22.42■■□□□ 1.18
PSPC1-203ENST00000471658 WDR18Q9BV38 432 aa22.42■■□□□ 1.18
PSPC1-203ENST00000471658 SH2B1Q9NRF2 756 aaPredicted RBP22.42■■□□□ 1.18
PSPC1-203ENST00000471658 FOXD4L1Q9NU39 408 aa22.42■■□□□ 1.18
PSPC1-203ENST00000471658 MYH4Q9Y623 1939 aa22.42■■□□□ 1.18
PSPC1-203ENST00000471658 F5H6K3 240 aa22.42■■□□□ 1.18
PSPC1-203ENST00000471658 KLRC3Q07444 240 aa22.42■■□□□ 1.18
PSPC1-203ENST00000471658 SLFN13Q68D06 897 aa22.42■■□□□ 1.18
PSPC1-203ENST00000471658 GTF3C6Q969F1 213 aa22.42■■□□□ 1.18
PSPC1-203ENST00000471658 AFG3L2Q9Y4W6 797 aa22.42■■□□□ 1.18
PSPC1-203ENST00000471658 PPFIA3O75145 1194 aa22.41■■□□□ 1.18
PSPC1-203ENST00000471658 NDUFB10O96000 172 aa22.41■■□□□ 1.18
PSPC1-203ENST00000471658 GOLGA8HP0CJ92 632 aa22.41■■□□□ 1.18
PSPC1-203ENST00000471658 PDHBP11177 359 aa22.41■■□□□ 1.18
PSPC1-203ENST00000471658 CUL4AQ13619 759 aa22.41■■□□□ 1.18
PSPC1-203ENST00000471658 SPICE1Q8N0Z3 855 aa22.41■■□□□ 1.18
PSPC1-203ENST00000471658 STAG2Q8N3U4 1231 aa22.41■■□□□ 1.18
PSPC1-203ENST00000471658 ZNF280CQ8ND82 737 aa22.41■■□□□ 1.18
PSPC1-203ENST00000471658 SLC10A4Q96EP9 437 aa22.41■■□□□ 1.18
PSPC1-203ENST00000471658 OTUD5Q96G74 571 aa22.41■■□□□ 1.18
PSPC1-203ENST00000471658 FEZ1Q99689 392 aa22.41■■□□□ 1.18
PSPC1-203ENST00000471658 AS3MTQ9HBK9 375 aa22.41■■□□□ 1.18
PSPC1-203ENST00000471658 TRPM7Q96QT4 1865 aa22.4■■□□□ 1.18
PSPC1-203ENST00000471658 FRMPD2Q68DX3 1309 aaPredicted RBP22.4■■□□□ 1.18
PSPC1-203ENST00000471658 SPDYE5A6NIY4 337 aa22.4■■□□□ 1.18
PSPC1-203ENST00000471658 MTMR2Q13614 643 aa22.4■■□□□ 1.18
PSPC1-203ENST00000471658 GRM4Q14833 912 aa22.4■■□□□ 1.18
PSPC1-203ENST00000471658 RTN1Q16799 776 aa22.4■■□□□ 1.18
PSPC1-203ENST00000471658 ERO1BQ86YB8 467 aa22.4■■□□□ 1.18
PSPC1-203ENST00000471658 CMTR1Q8N1G2 835 aaKnown RBP22.4■■□□□ 1.18
PSPC1-203ENST00000471658 NUP88Q99567 741 aaPredicted RBP22.4■■□□□ 1.18
PSPC1-203ENST00000471658 PHIPQ8WWQ0 1821 aa22.4■■□□□ 1.18
PSPC1-203ENST00000471658 USP17L10C9JJH3 530 aa22.39■■□□□ 1.18
PSPC1-203ENST00000471658 CALM1P0DP23 149 aa22.39■■□□□ 1.18
PSPC1-203ENST00000471658 CALM2P0DP24 149 aa22.39■■□□□ 1.18
PSPC1-203ENST00000471658 CALM3P0DP25 149 aa22.39■■□□□ 1.18
PSPC1-203ENST00000471658 GJA5P36382 358 aa22.39■■□□□ 1.18
PSPC1-203ENST00000471658 GMCL1P1Q8NEA9 526 aa22.39■■□□□ 1.18
PSPC1-203ENST00000471658 OPTNQ96CV9 577 aa22.39■■□□□ 1.18
PSPC1-203ENST00000471658 KIAA1683Q9H0B3 1180 aa22.39■■□□□ 1.18
PSPC1-203ENST00000471658 VCPKMTQ9H867 229 aa22.39■■□□□ 1.18
PSPC1-203ENST00000471658 MAD2L2Q9UI95 211 aa22.39■■□□□ 1.18
PSPC1-203ENST00000471658 PLEKHA8P1O95397 391 aa22.39■■□□□ 1.17
PSPC1-203ENST00000471658 CTDNEP1O95476 244 aa22.39■■□□□ 1.17
PSPC1-203ENST00000471658 SNHG28P0DPA3 235 aa22.39■■□□□ 1.17
PSPC1-203ENST00000471658 BACE1P56817 501 aa22.39■■□□□ 1.17
PSPC1-203ENST00000471658 HUNKP57058 714 aa22.39■■□□□ 1.17
PSPC1-203ENST00000471658 PPATQ06203 517 aa22.39■■□□□ 1.17
PSPC1-203ENST00000471658 FSTL1Q12841 308 aa22.39■■□□□ 1.17
PSPC1-203ENST00000471658 SH2D4AQ9H788 454 aa22.39■■□□□ 1.17
PSPC1-203ENST00000471658 GPCPD1Q9NPB8 672 aa22.39■■□□□ 1.17
PSPC1-203ENST00000471658 EMILIN3Q9NT22 766 aa22.39■■□□□ 1.17
PSPC1-203ENST00000471658 NID2Q14112 1375 aa22.38■■□□□ 1.17
PSPC1-203ENST00000471658 PALM3A6NDB9 673 aaPredicted RBP22.38■■□□□ 1.17
PSPC1-203ENST00000471658 IRF6O14896 467 aa22.38■■□□□ 1.17
PSPC1-203ENST00000471658 RCAN1P53805 252 aa22.38■■□□□ 1.17
PSPC1-203ENST00000471658 TTBK2Q6IQ55 1244 aa22.38■■□□□ 1.17
PSPC1-203ENST00000471658 KCTD1Q719H9 257 aa22.38■■□□□ 1.17
PSPC1-203ENST00000471658 CCDC82Q8N4S0 544 aa22.38■■□□□ 1.17
PSPC1-203ENST00000471658 CTCFLQ8NI51 663 aaPredicted RBP22.38■■□□□ 1.17
PSPC1-203ENST00000471658 CPVLQ9H3G5 476 aa22.38■■□□□ 1.17
PSPC1-203ENST00000471658 UNCXA6NJT0 531 aa22.37■■□□□ 1.17
PSPC1-203ENST00000471658 PARP1P09874 1014 aaKnown RBP22.37■■□□□ 1.17
PSPC1-203ENST00000471658 HMGCS2P54868 508 aa22.37■■□□□ 1.17
PSPC1-203ENST00000471658 NBPF11Q86T75 865 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms