RNA–Protein interactions for RNA: ENST00000471596.1

CSRP1-204, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 2

Gene CSRP1, Length 758 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-204ENST00000471596 ZSCAN16Q9H4T2 348 aaPredicted RBP11.29□□□□□ -0.6
CSRP1-204ENST00000471596 EFCC1Q9HA90 598 aa11.29□□□□□ -0.6
CSRP1-204ENST00000471596 ATP8A2Q9NTI2 1148 aa11.29□□□□□ -0.6
CSRP1-204ENST00000471596 PTPN22Q9Y2R2 807 aa11.29□□□□□ -0.6
CSRP1-204ENST00000471596 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.29□□□□□ -0.6
CSRP1-204ENST00000471596 MROH7-TTC4A0A0A0MT08 1334 aa11.29□□□□□ -0.6
CSRP1-204ENST00000471596 SPDYE4A6NLX3 237 aa11.28□□□□□ -0.6
CSRP1-204ENST00000471596 FIBPO43427 364 aa11.28□□□□□ -0.6
CSRP1-204ENST00000471596 KDM4AO75164 1064 aa11.28□□□□□ -0.6
CSRP1-204ENST00000471596 USP2O75604 605 aaPredicted RBP11.28□□□□□ -0.6
CSRP1-204ENST00000471596 CDKL5O76039 1030 aa11.28□□□□□ -0.6
CSRP1-204ENST00000471596 ZBTB48P10074 688 aaPredicted RBP11.28□□□□□ -0.6
CSRP1-204ENST00000471596 IREB2P48200 963 aaKnown RBP11.28□□□□□ -0.6
CSRP1-204ENST00000471596 METAP2P50579 478 aaKnown RBP eCLIP11.28□□□□□ -0.6
CSRP1-204ENST00000471596 CCT2P78371 535 aaKnown RBP11.28□□□□□ -0.6
CSRP1-204ENST00000471596 SART3Q15020 963 aaKnown RBP11.28□□□□□ -0.6
CSRP1-204ENST00000471596 SBK1Q52WX2 424 aa11.28□□□□□ -0.6
CSRP1-204ENST00000471596 TMEM67Q5HYA8 995 aa11.28□□□□□ -0.6
CSRP1-204ENST00000471596 SYAP1Q96A49 352 aaPredicted RBP11.28□□□□□ -0.6
CSRP1-204ENST00000471596 ELP3Q9H9T3 547 aa11.28□□□□□ -0.6
CSRP1-204ENST00000471596 USP40Q9NVE5 1235 aa11.28□□□□□ -0.6
CSRP1-204ENST00000471596 GAKO14976 1311 aa11.28□□□□□ -0.6
CSRP1-204ENST00000471596 GREB1LQ9C091 1923 aaPredicted RBP11.27□□□□□ -0.6
CSRP1-204ENST00000471596 GOLGA8AA7E2F4 631 aa11.27□□□□□ -0.61
CSRP1-204ENST00000471596 H3BQV1 296 aa11.27□□□□□ -0.61
CSRP1-204ENST00000471596 ORC4O43929 436 aa11.27□□□□□ -0.61
CSRP1-204ENST00000471596 DTNBO60941 627 aa11.27□□□□□ -0.61
CSRP1-204ENST00000471596 FDPSP14324 419 aaKnown RBP11.27□□□□□ -0.61
CSRP1-204ENST00000471596 NCLP19338 710 aaKnown RBP11.27□□□□□ -0.61
CSRP1-204ENST00000471596 CACNB3P54284 484 aa11.27□□□□□ -0.61
CSRP1-204ENST00000471596 PPP4CP60510 307 aa11.27□□□□□ -0.61
CSRP1-204ENST00000471596 CAP1Q01518 475 aa11.27□□□□□ -0.61
CSRP1-204ENST00000471596 SP3Q02447 781 aa11.27□□□□□ -0.61
CSRP1-204ENST00000471596 MAP3K11Q16584 847 aa11.27□□□□□ -0.61
CSRP1-204ENST00000471596 ZSCAN23Q3MJ62 389 aa11.27□□□□□ -0.61
CSRP1-204ENST00000471596 FKBP1CQ5VVH2 108 aa11.27□□□□□ -0.61
CSRP1-204ENST00000471596 CDC42EP5Q6NZY7 148 aa11.27□□□□□ -0.61
CSRP1-204ENST00000471596 ESR2Q92731 530 aa11.27□□□□□ -0.61
CSRP1-204ENST00000471596 DDX11Q96FC9 970 aa11.27□□□□□ -0.61
CSRP1-204ENST00000471596 PTPN18Q99952 460 aa11.27□□□□□ -0.61
CSRP1-204ENST00000471596 GDPD2Q9HCC8 539 aa11.27□□□□□ -0.61
CSRP1-204ENST00000471596 DCP1AQ9NPI6 582 aaPredicted RBP11.27□□□□□ -0.61
CSRP1-204ENST00000471596 AATFQ9NY61 560 aaKnown RBP eCLIP11.27□□□□□ -0.61
CSRP1-204ENST00000471596 TMEM63CQ9P1W3 806 aa11.27□□□□□ -0.61
CSRP1-204ENST00000471596 NAP1L2Q9ULW6 460 aaPredicted RBP11.27□□□□□ -0.61
CSRP1-204ENST00000471596 DAGLAQ9Y4D2 1042 aa11.27□□□□□ -0.61
CSRP1-204ENST00000471596 IFIT3O14879 490 aaKnown RBP11.26□□□□□ -0.61
CSRP1-204ENST00000471596 ZBTB43O43298 467 aa11.26□□□□□ -0.61
CSRP1-204ENST00000471596 GADD45BO75293 160 aaPredicted RBP11.26□□□□□ -0.61
CSRP1-204ENST00000471596 MRE11P49959 708 aa11.26□□□□□ -0.61
CSRP1-204ENST00000471596 SEC23AQ15436 765 aa11.26□□□□□ -0.61
CSRP1-204ENST00000471596 FOXD4L6Q3SYB3 417 aaPredicted RBP11.26□□□□□ -0.61
CSRP1-204ENST00000471596 CTR9Q6PD62 1173 aa11.26□□□□□ -0.61
CSRP1-204ENST00000471596 CPLX2Q6PUV4 134 aaKnown RBP11.26□□□□□ -0.61
CSRP1-204ENST00000471596 FOXD4L3Q6VB84 417 aaPredicted RBP11.26□□□□□ -0.61
CSRP1-204ENST00000471596 TTC6Q86TZ1 520 aa11.26□□□□□ -0.61
CSRP1-204ENST00000471596 FERMT3Q86UX7 667 aa11.26□□□□□ -0.61
CSRP1-204ENST00000471596 FAM83AQ86UY5 434 aa11.26□□□□□ -0.61
CSRP1-204ENST00000471596 OPTNQ96CV9 577 aa11.26□□□□□ -0.61
CSRP1-204ENST00000471596 FAM163AQ96GL9 167 aaPredicted RBP11.26□□□□□ -0.61
CSRP1-204ENST00000471596 NOL10Q9BSC4 688 aaKnown RBP11.26□□□□□ -0.61
CSRP1-204ENST00000471596 TMEM106CQ9BVX2 250 aa11.26□□□□□ -0.61
CSRP1-204ENST00000471596 TMEM39BQ9GZU3 492 aa11.26□□□□□ -0.61
CSRP1-204ENST00000471596 SCAND2PQ9GZW5 306 aaPredicted RBP11.26□□□□□ -0.61
CSRP1-204ENST00000471596 ZSWIM5Q9P217 1185 aa11.26□□□□□ -0.61
CSRP1-204ENST00000471596 SIPA1L1O43166 1804 aa11.25□□□□□ -0.61
CSRP1-204ENST00000471596 SSC5DA1L4H1 1573 aa11.25□□□□□ -0.61
CSRP1-204ENST00000471596 ERICH2A1L162 156 aa11.25□□□□□ -0.61
CSRP1-204ENST00000471596 CCDC69A6NI79 296 aa11.25□□□□□ -0.61
CSRP1-204ENST00000471596 CPLX1O14810 134 aa11.25□□□□□ -0.61
CSRP1-204ENST00000471596 ECM2O94769 699 aaPredicted RBP11.25□□□□□ -0.61
CSRP1-204ENST00000471596 WTAPQ15007 396 aa11.25□□□□□ -0.61
CSRP1-204ENST00000471596 NTRK3Q16288 839 aa11.25□□□□□ -0.61
CSRP1-204ENST00000471596 SLC4A8Q2Y0W8 1093 aa11.25□□□□□ -0.61
CSRP1-204ENST00000471596 ATL3Q6DD88 541 aa11.25□□□□□ -0.61
CSRP1-204ENST00000471596 MICU3Q86XE3 530 aa11.25□□□□□ -0.61
CSRP1-204ENST00000471596 ANKRD13AQ8IZ07 590 aa11.25□□□□□ -0.61
CSRP1-204ENST00000471596 TMTC2Q8N394 836 aa11.25□□□□□ -0.61
CSRP1-204ENST00000471596 HOOK2Q96ED9 719 aa11.25□□□□□ -0.61
CSRP1-204ENST00000471596 GRPEL1Q9HAV7 217 aa11.25□□□□□ -0.61
CSRP1-204ENST00000471596 SENP2Q9HC62 589 aa11.25□□□□□ -0.61
CSRP1-204ENST00000471596 RBM27Q9P2N5 1060 aaKnown RBP11.25□□□□□ -0.61
CSRP1-204ENST00000471596 ORC3Q9UBD5 711 aaPredicted RBP11.25□□□□□ -0.61
CSRP1-204ENST00000471596 TNKSO95271 1327 aa11.25□□□□□ -0.61
CSRP1-204ENST00000471596 KIAA0100Q14667 2235 aaKnown RBP11.24□□□□□ -0.61
CSRP1-204ENST00000471596 GPR75-ASB3A0A0A6YYF3 556 aa11.24□□□□□ -0.61
CSRP1-204ENST00000471596 MINDY4BA8MYZ0 360 aa11.24□□□□□ -0.61
CSRP1-204ENST00000471596 BAG3O95817 575 aa11.24□□□□□ -0.61
CSRP1-204ENST00000471596 IFNAR1P17181 557 aa11.24□□□□□ -0.61
CSRP1-204ENST00000471596 CDC27P30260 824 aa11.24□□□□□ -0.61
CSRP1-204ENST00000471596 BTDP43251 543 aa11.24□□□□□ -0.61
CSRP1-204ENST00000471596 TCP10Q12799 353 aa11.24□□□□□ -0.61
CSRP1-204ENST00000471596 SLC9C1Q4G0N8 1177 aa11.24□□□□□ -0.61
CSRP1-204ENST00000471596 RRP12Q5JTH9 1297 aaKnown RBP11.24□□□□□ -0.61
CSRP1-204ENST00000471596 CCDC183Q5T5S1 534 aa11.24□□□□□ -0.61
CSRP1-204ENST00000471596 NFXL1Q6ZNB6 911 aa11.24□□□□□ -0.61
CSRP1-204ENST00000471596 GAS2L3Q86XJ1 694 aa11.24□□□□□ -0.61
CSRP1-204ENST00000471596 CDAN1Q8IWY9 1227 aa11.24□□□□□ -0.61
CSRP1-204ENST00000471596 LEO1Q8WVC0 666 aaPredicted RBP11.24□□□□□ -0.61
CSRP1-204ENST00000471596 FAM151AQ8WW52 585 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms