RNA–Protein interactions for RNA: ENST00000471047.1

CLK2-204, Transcript of CDC like kinase 2, humanhuman

TSL 3

Gene CLK2, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-204ENST00000471047 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.54□□□□□ -0.56
CLK2-204ENST00000471047 MYH8P13535 1937 aa11.54□□□□□ -0.56
CLK2-204ENST00000471047 PLIN4Q96Q06 1357 aa11.54□□□□□ -0.56
CLK2-204ENST00000471047 RANBP2P49792 3224 aaKnown RBP11.53□□□□□ -0.56
CLK2-204ENST00000471047 CLRN2A0PK11 232 aa11.53□□□□□ -0.56
CLK2-204ENST00000471047 ERICH2A1L162 156 aa11.53□□□□□ -0.56
CLK2-204ENST00000471047 MANSC4A6NHS7 340 aaPredicted RBP11.53□□□□□ -0.56
CLK2-204ENST00000471047 TSPY2A6NKD2 308 aa11.53□□□□□ -0.56
CLK2-204ENST00000471047 MYO1BO43795 1136 aa11.53□□□□□ -0.56
CLK2-204ENST00000471047 SHMT1P34896 483 aa11.53□□□□□ -0.56
CLK2-204ENST00000471047 NOVP48745 357 aa11.53□□□□□ -0.56
CLK2-204ENST00000471047 RCAN1P53805 252 aa11.53□□□□□ -0.56
CLK2-204ENST00000471047 TFAP4Q01664 338 aa11.53□□□□□ -0.56
CLK2-204ENST00000471047 STK3Q13188 491 aa11.53□□□□□ -0.56
CLK2-204ENST00000471047 CRHR2Q13324 411 aa11.53□□□□□ -0.56
CLK2-204ENST00000471047 FAM47AQ5JRC9 791 aa11.53□□□□□ -0.56
CLK2-204ENST00000471047 RCSD1Q6JBY9 416 aa11.53□□□□□ -0.56
CLK2-204ENST00000471047 TATDN1Q6P1N9 297 aa11.53□□□□□ -0.56
CLK2-204ENST00000471047 CHRDL2Q6WN34 429 aa11.53□□□□□ -0.56
CLK2-204ENST00000471047 FOXP4Q8IVH2 680 aaPredicted RBP11.53□□□□□ -0.56
CLK2-204ENST00000471047 ZNF444Q8N0Y2 327 aaPredicted RBP11.53□□□□□ -0.56
CLK2-204ENST00000471047 NEDD1Q8NHV4 660 aa11.53□□□□□ -0.56
CLK2-204ENST00000471047 ERO1AQ96HE7 468 aa11.53□□□□□ -0.56
CLK2-204ENST00000471047 ZNF333Q96JL9 665 aa11.53□□□□□ -0.56
CLK2-204ENST00000471047 DNAJC18Q9H819 358 aa11.53□□□□□ -0.56
CLK2-204ENST00000471047 EFCC1Q9HA90 598 aa11.53□□□□□ -0.56
CLK2-204ENST00000471047 IL17RBQ9NRM6 502 aa11.53□□□□□ -0.56
CLK2-204ENST00000471047 CHMP5Q9NZZ3 219 aa11.53□□□□□ -0.56
CLK2-204ENST00000471047 GOLGA8BA8MQT2 603 aa11.52□□□□□ -0.57
CLK2-204ENST00000471047 TCP10L2B9ZVM9 353 aa11.52□□□□□ -0.57
CLK2-204ENST00000471047 MYCP01106 439 aaPredicted RBP11.52□□□□□ -0.57
CLK2-204ENST00000471047 CCDC178Q5BJE1 867 aa11.52□□□□□ -0.57
CLK2-204ENST00000471047 DGKHQ86XP1 1220 aa11.52□□□□□ -0.57
CLK2-204ENST00000471047 SLC17A8Q8NDX2 589 aa11.52□□□□□ -0.57
CLK2-204ENST00000471047 SMARCC2Q8TAQ2 1214 aa11.52□□□□□ -0.57
CLK2-204ENST00000471047 CHMP4CQ96CF2 233 aa11.52□□□□□ -0.57
CLK2-204ENST00000471047 SLC10A4Q96EP9 437 aa11.52□□□□□ -0.57
CLK2-204ENST00000471047 WNK4Q96J92 1243 aa11.52□□□□□ -0.57
CLK2-204ENST00000471047 LLPHQ9BRT6 129 aaKnown RBP11.52□□□□□ -0.57
CLK2-204ENST00000471047 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.52□□□□□ -0.57
CLK2-204ENST00000471047 TMEM106CQ9BVX2 250 aa11.52□□□□□ -0.57
CLK2-204ENST00000471047 IGKV6D-41A0A0C4DH26 115 aa11.51□□□□□ -0.57
CLK2-204ENST00000471047 CCDC69A6NI79 296 aa11.51□□□□□ -0.57
CLK2-204ENST00000471047 ZBTB43O43298 467 aa11.51□□□□□ -0.57
CLK2-204ENST00000471047 NMT2O60551 498 aa11.51□□□□□ -0.57
CLK2-204ENST00000471047 CTDNEP1O95476 244 aa11.51□□□□□ -0.57
CLK2-204ENST00000471047 TSPY3P0CV98 308 aa11.51□□□□□ -0.57
CLK2-204ENST00000471047 TSPY8P0CW00 308 aa11.51□□□□□ -0.57
CLK2-204ENST00000471047 GJA5P36382 358 aa11.51□□□□□ -0.57
CLK2-204ENST00000471047 CCT2P78371 535 aaKnown RBP11.51□□□□□ -0.57
CLK2-204ENST00000471047 MAP3K10Q02779 954 aa11.51□□□□□ -0.57
CLK2-204ENST00000471047 IFIT1BQ5T764 474 aaKnown RBP11.51□□□□□ -0.57
CLK2-204ENST00000471047 ZSCAN29Q8IWY8 852 aaPredicted RBP11.51□□□□□ -0.57
CLK2-204ENST00000471047 NSUN7Q8NE18 718 aaKnown RBP11.51□□□□□ -0.57
CLK2-204ENST00000471047 CCDC17Q96LX7 622 aa11.51□□□□□ -0.57
CLK2-204ENST00000471047 NCOA5Q9HCD5 579 aaKnown RBP11.51□□□□□ -0.57
CLK2-204ENST00000471047 FAM217BQ9NTX9 383 aaPredicted RBP11.51□□□□□ -0.57
CLK2-204ENST00000471047 RBM27Q9P2N5 1060 aaKnown RBP11.51□□□□□ -0.57
CLK2-204ENST00000471047 HERC5Q9UII4 1024 aaKnown RBP11.51□□□□□ -0.57
CLK2-204ENST00000471047 SMC3Q9UQE7 1217 aa11.51□□□□□ -0.57
CLK2-204ENST00000471047 SLC12A7Q9Y666 1083 aa11.51□□□□□ -0.57
CLK2-204ENST00000471047 SSC5DA1L4H1 1573 aa11.5□□□□□ -0.57
CLK2-204ENST00000471047 DHX16O60231 1041 aaKnown RBP11.5□□□□□ -0.57
CLK2-204ENST00000471047 TBC1D12O60347 775 aa11.5□□□□□ -0.57
CLK2-204ENST00000471047 SLURP2P0DP57 97 aa11.5□□□□□ -0.57
CLK2-204ENST00000471047 GJB2P29033 226 aa11.5□□□□□ -0.57
CLK2-204ENST00000471047 TNNI2P48788 182 aa11.5□□□□□ -0.57
CLK2-204ENST00000471047 INHBEP58166 350 aa11.5□□□□□ -0.57
CLK2-204ENST00000471047 SP3Q02447 781 aa11.5□□□□□ -0.57
CLK2-204ENST00000471047 TROAPQ12815 778 aa11.5□□□□□ -0.57
CLK2-204ENST00000471047 NFXL1Q6ZNB6 911 aa11.5□□□□□ -0.57
CLK2-204ENST00000471047 APOBEC3FQ8IUX4 373 aaKnown RBP11.5□□□□□ -0.57
CLK2-204ENST00000471047 ZNF654Q8IZM8 581 aa11.5□□□□□ -0.57
CLK2-204ENST00000471047 TEPSINQ96N21 525 aa11.5□□□□□ -0.57
CLK2-204ENST00000471047 PTPN18Q99952 460 aa11.5□□□□□ -0.57
CLK2-204ENST00000471047 TMEM39BQ9GZU3 492 aa11.5□□□□□ -0.57
CLK2-204ENST00000471047 VEZTQ9HBM0 779 aa11.5□□□□□ -0.57
CLK2-204ENST00000471047 PTCH2Q9Y6C5 1203 aa11.5□□□□□ -0.57
CLK2-204ENST00000471047 DDAH1O94760 285 aa11.49□□□□□ -0.57
CLK2-204ENST00000471047 ZBTB48P10074 688 aaPredicted RBP11.49□□□□□ -0.57
CLK2-204ENST00000471047 AKR1B1P15121 316 aa11.49□□□□□ -0.57
CLK2-204ENST00000471047 CDC27P30260 824 aa11.49□□□□□ -0.57
CLK2-204ENST00000471047 ADD1P35611 737 aaKnown RBP11.49□□□□□ -0.57
CLK2-204ENST00000471047 METAP2P50579 478 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLK2-204ENST00000471047 TNFAIP1Q13829 316 aa11.49□□□□□ -0.57
CLK2-204ENST00000471047 RASA3Q14644 834 aa11.49□□□□□ -0.57
CLK2-204ENST00000471047 RAB3GAP1Q15042 981 aa11.49□□□□□ -0.57
CLK2-204ENST00000471047 PPP2R5BQ15173 497 aa11.49□□□□□ -0.57
CLK2-204ENST00000471047 NTRK3Q16288 839 aa11.49□□□□□ -0.57
CLK2-204ENST00000471047 MAP3K11Q16584 847 aa11.49□□□□□ -0.57
CLK2-204ENST00000471047 SYNE3Q6ZMZ3 975 aa11.49□□□□□ -0.57
CLK2-204ENST00000471047 MICU3Q86XE3 530 aa11.49□□□□□ -0.57
CLK2-204ENST00000471047 CRACR2BQ8N4Y2 399 aaPredicted RBP11.49□□□□□ -0.57
CLK2-204ENST00000471047 MAP3K14Q99558 947 aa11.49□□□□□ -0.57
CLK2-204ENST00000471047 MYL10Q9BUA6 226 aa11.49□□□□□ -0.57
CLK2-204ENST00000471047 NAP1L2Q9ULW6 460 aaPredicted RBP11.49□□□□□ -0.57
CLK2-204ENST00000471047 PTPDC1A2A3K4 754 aa11.48□□□□□ -0.57
CLK2-204ENST00000471047 FAM196BA6NMK8 535 aa11.48□□□□□ -0.57
CLK2-204ENST00000471047 GOLGA8AA7E2F4 631 aa11.48□□□□□ -0.57
CLK2-204ENST00000471047 JAK2O60674 1132 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms