RNA–Protein interactions for RNA: ENST00000470980.1

GREB1-208, Transcript of growth regulating estrogen receptor binding 1, human

TSL 3

Gene GREB1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GREB1-208	ENST00000470980	KAT14	Q9H8E8	782 aa		10.83	□□□□□ -0.68
GREB1-208	ENST00000470980	GGA3	Q9NZ52	723 aa		10.83	□□□□□ -0.68
GREB1-208	ENST00000470980	FAM198A	Q9UFP1	575 aa		10.83	□□□□□ -0.68
GREB1-208	ENST00000470980	SWAP70	Q9UH65	585 aa		10.83	□□□□□ -0.68
GREB1-208	ENST00000470980	SERPINB13	Q9UIV8	391 aa		10.83	□□□□□ -0.68
GREB1-208	ENST00000470980	MYH1	P12882	1939 aa		10.83	□□□□□ -0.68
GREB1-208	ENST00000470980	FOCAD	Q5VW36	1801 aa		10.83	□□□□□ -0.68
GREB1-208	ENST00000470980	NID2	Q14112	1375 aa		10.82	□□□□□ -0.68
GREB1-208	ENST00000470980	DDAH1	O94760	285 aa		10.82	□□□□□ -0.68
GREB1-208	ENST00000470980	FDPS	P14324	419 aa	Known RBP	10.82	□□□□□ -0.68
GREB1-208	ENST00000470980	SSRP1	Q08945	709 aa	Known RBP	10.82	□□□□□ -0.68
GREB1-208	ENST00000470980	PPP2R5B	Q15173	497 aa		10.82	□□□□□ -0.68
GREB1-208	ENST00000470980	FERMT3	Q86UX7	667 aa		10.82	□□□□□ -0.68
GREB1-208	ENST00000470980	SULF1	Q8IWU6	871 aa		10.82	□□□□□ -0.68
GREB1-208	ENST00000470980	NEDD1	Q8NHV4	660 aa		10.82	□□□□□ -0.68
GREB1-208	ENST00000470980	PHKB	Q93100	1093 aa		10.82	□□□□□ -0.68
GREB1-208	ENST00000470980	CDCA5	Q96FF9	252 aa		10.82	□□□□□ -0.68
GREB1-208	ENST00000470980	CHAMP1	Q96JM3	812 aa		10.82	□□□□□ -0.68
GREB1-208	ENST00000470980	MCOLN1	Q9GZU1	580 aa		10.82	□□□□□ -0.68
GREB1-208	ENST00000470980	DHX36	Q9H2U1	1008 aa	Known RBP	10.82	□□□□□ -0.68
GREB1-208	ENST00000470980	IL17RB	Q9NRM6	502 aa		10.82	□□□□□ -0.68
GREB1-208	ENST00000470980	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.82	□□□□□ -0.68
GREB1-208	ENST00000470980	TCP11L1	Q9NUJ3	509 aa		10.82	□□□□□ -0.68
GREB1-208	ENST00000470980	TSKS	Q9UJT2	592 aa		10.82	□□□□□ -0.68
GREB1-208	ENST00000470980	ECM29	Q5VYK3	1845 aa		10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	PAPPA2	Q9BXP8	1791 aa		10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	CLRN2	A0PK11	232 aa		10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	ENTPD3	O75355	529 aa		10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	NCL	P19338	710 aa	Known RBP	10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	GUCY1B3	Q02153	619 aa		10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	KIF23	Q02241	960 aa	Predicted RBP	10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	GABPA	Q06546	454 aa		10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	ANGEL2	Q5VTE6	544 aa	Known RBP	10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	RCSD1	Q6JBY9	416 aa		10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	DGKH	Q86XP1	1220 aa		10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	TRIM22	Q8IYM9	498 aa		10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	CTCFL	Q8NI51	663 aa	Predicted RBP	10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	ANKS1A	Q92625	1134 aa		10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	C8orf76	Q96K31	380 aa		10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	SLC26A6	Q9BXS9	759 aa		10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	EHD4	Q9H223	541 aa		10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	MYOZ2	Q9NPC6	264 aa		10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	RBM28	Q9NW13	759 aa	Known RBP	10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	PI4KB	Q9UBF8	816 aa		10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	ZNF70	Q9UC06	446 aa	Predicted RBP	10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	TAOK2	Q9UL54	1235 aa		10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	STX8	Q9UNK0	236 aa		10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	ASTN2	O75129	1339 aa	Predicted RBP	10.81	□□□□□ -0.68
GREB1-208	ENST00000470980	CASP8AP2	Q9UKL3	1982 aa		10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	DDTL	A6NHG4	134 aa	Predicted RBP	10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	TCP10L2	B9ZVM9	353 aa		10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	MPHOSPH10	O00566	681 aa	Known RBP	10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	MYO1B	O43795	1136 aa		10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	PRPF40A	O75400	957 aa	Known RBP	10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	FMNL1	O95466	1100 aa	Predicted RBP	10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	IFNAR1	P17181	557 aa		10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	KIF5B	P33176	963 aa		10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	SHMT1	P34896	483 aa		10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	ZNF157	P51786	506 aa	Predicted RBP	10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	AKAP17A	Q02040	695 aa	Known RBP	10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	TROAP	Q12815	778 aa		10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	NTRK3	Q16288	839 aa		10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	SPDYE2	Q495Y8	402 aa		10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	RBM26	Q5T8P6	1007 aa	Known RBP	10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	CCDC82	Q8N4S0	544 aa		10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	MTMR14	Q8NCE2	650 aa		10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	PNMA1	Q8ND90	353 aa		10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	WASF1	Q92558	559 aa		10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	CSRNP1	Q96S65	589 aa		10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	ALG1	Q9BT22	464 aa		10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	VEZT	Q9HBM0	779 aa		10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	RNF186	Q9NXI6	227 aa		10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	STK36	Q9NRP7	1315 aa		10.8	□□□□□ -0.68
GREB1-208	ENST00000470980	TNRC18	O15417	2968 aa	Predicted RBP	10.79	□□□□□ -0.68
GREB1-208	ENST00000470980	TRAK2	O60296	914 aa		10.79	□□□□□ -0.68
GREB1-208	ENST00000470980	TOP1	P11387	765 aa	Known RBP	10.79	□□□□□ -0.68
GREB1-208	ENST00000470980	AKR1B1	P15121	316 aa		10.79	□□□□□ -0.68
GREB1-208	ENST00000470980	REST	Q13127	1097 aa		10.79	□□□□□ -0.68
GREB1-208	ENST00000470980	TRIM29	Q14134	588 aa		10.79	□□□□□ -0.68
GREB1-208	ENST00000470980	SKOR2	Q2VWA4	1001 aa	Predicted RBP	10.79	□□□□□ -0.68
GREB1-208	ENST00000470980	SH3BP5L	Q7L8J4	393 aa		10.79	□□□□□ -0.68
GREB1-208	ENST00000470980	RASAL3	Q86YV0	1011 aa		10.79	□□□□□ -0.68
GREB1-208	ENST00000470980	FOXP4	Q8IVH2	680 aa	Predicted RBP	10.79	□□□□□ -0.68
GREB1-208	ENST00000470980	CMTR1	Q8N1G2	835 aa	Known RBP	10.79	□□□□□ -0.68
GREB1-208	ENST00000470980	CEP95	Q96GE4	821 aa		10.79	□□□□□ -0.68
GREB1-208	ENST00000470980	ZBED3	Q96IU2	234 aa	Predicted RBP	10.79	□□□□□ -0.68
GREB1-208	ENST00000470980	TMEM47	Q9BQJ4	181 aa		10.79	□□□□□ -0.68
GREB1-208	ENST00000470980	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	10.79	□□□□□ -0.68
GREB1-208	ENST00000470980	ATRNL1	Q5VV63	1379 aa		10.78	□□□□□ -0.68
GREB1-208	ENST00000470980	FAM196B	A6NMK8	535 aa		10.78	□□□□□ -0.68
GREB1-208	ENST00000470980	PLEKHA8P1	O95397	391 aa		10.78	□□□□□ -0.68
GREB1-208	ENST00000470980	MLLT1	Q03111	559 aa	Predicted RBP	10.78	□□□□□ -0.68
GREB1-208	ENST00000470980	DNM1	Q05193	864 aa	Known RBP	10.78	□□□□□ -0.68
GREB1-208	ENST00000470980	NOM1	Q5C9Z4	860 aa	Known RBP	10.78	□□□□□ -0.68
GREB1-208	ENST00000470980	FKBP1C	Q5VVH2	108 aa		10.78	□□□□□ -0.68
GREB1-208	ENST00000470980	OTUD7B	Q6GQQ9	843 aa		10.78	□□□□□ -0.68
GREB1-208	ENST00000470980	TMTC3	Q6ZXV5	915 aa		10.78	□□□□□ -0.68
GREB1-208	ENST00000470980	FBXO18	Q8NFZ0	1043 aa		10.78	□□□□□ -0.68
GREB1-208	ENST00000470980	FAM151A	Q8WW52	585 aa		10.78	□□□□□ -0.68
GREB1-208	ENST00000470980	CCDC17	Q96LX7	622 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms