RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 SSRP1Q08945 709 aaKnown RBP10.35□□□□□ -0.75
LMCD1-207ENST00000470776 ANGEL2Q5VTE6 544 aaKnown RBP10.35□□□□□ -0.75
LMCD1-207ENST00000470776 FAM184AQ8NB25 1140 aa10.35□□□□□ -0.75
LMCD1-207ENST00000470776 CTCFLQ8NI51 663 aaPredicted RBP10.35□□□□□ -0.75
LMCD1-207ENST00000470776 ZC3H15Q8WU90 426 aaKnown RBP10.35□□□□□ -0.75
LMCD1-207ENST00000470776 HOOK2Q96ED9 719 aa10.35□□□□□ -0.75
LMCD1-207ENST00000470776 DDX11Q96FC9 970 aa10.35□□□□□ -0.75
LMCD1-207ENST00000470776 LZTS2Q9BRK4 669 aa10.35□□□□□ -0.75
LMCD1-207ENST00000470776 CABP5Q9NP86 173 aa10.35□□□□□ -0.75
LMCD1-207ENST00000470776 ZNF112Q9UJU3 913 aa10.35□□□□□ -0.75
LMCD1-207ENST00000470776 STX8Q9UNK0 236 aa10.35□□□□□ -0.75
LMCD1-207ENST00000470776 POTECB2RU33 542 aa10.34□□□□□ -0.75
LMCD1-207ENST00000470776 DTNBO60941 627 aa10.34□□□□□ -0.75
LMCD1-207ENST00000470776 DEXIO95424 95 aa10.34□□□□□ -0.75
LMCD1-207ENST00000470776 F13A1P00488 732 aa10.34□□□□□ -0.75
LMCD1-207ENST00000470776 EEF2P13639 858 aaKnown RBP10.34□□□□□ -0.75
LMCD1-207ENST00000470776 CAP2P40123 477 aa10.34□□□□□ -0.75
LMCD1-207ENST00000470776 SEPT2Q15019 361 aa10.34□□□□□ -0.75
LMCD1-207ENST00000470776 CCDC144CPQ8IYA2 1237 aa10.34□□□□□ -0.75
LMCD1-207ENST00000470776 FAM43AQ8N2R8 423 aa10.34□□□□□ -0.75
LMCD1-207ENST00000470776 SRBD1Q8N5C6 995 aaKnown RBP10.34□□□□□ -0.75
LMCD1-207ENST00000470776 FBXO18Q8NFZ0 1043 aa10.34□□□□□ -0.75
LMCD1-207ENST00000470776 ZNF526Q8TF50 670 aaPredicted RBP10.34□□□□□ -0.75
LMCD1-207ENST00000470776 WASF1Q92558 559 aa10.34□□□□□ -0.75
LMCD1-207ENST00000470776 GGA3Q9NZ52 723 aa10.34□□□□□ -0.75
LMCD1-207ENST00000470776 RBM27Q9P2N5 1060 aaKnown RBP10.34□□□□□ -0.75
LMCD1-207ENST00000470776 CLIP2Q9UDT6 1046 aa10.34□□□□□ -0.75
LMCD1-207ENST00000470776 MAD2L2Q9UI95 211 aa10.34□□□□□ -0.75
LMCD1-207ENST00000470776 CNTNAP5Q8WYK1 1306 aa10.33□□□□□ -0.76
LMCD1-207ENST00000470776 MPHOSPH10O00566 681 aaKnown RBP10.33□□□□□ -0.76
LMCD1-207ENST00000470776 CTNND1O60716 968 aaKnown RBP10.33□□□□□ -0.76
LMCD1-207ENST00000470776 PLEKHA8P1O95397 391 aa10.33□□□□□ -0.76
LMCD1-207ENST00000470776 BAG4O95429 457 aaKnown RBP10.33□□□□□ -0.76
LMCD1-207ENST00000470776 GH2P01242 217 aa10.33□□□□□ -0.76
LMCD1-207ENST00000470776 PDHBP11177 359 aa10.33□□□□□ -0.76
LMCD1-207ENST00000470776 MRE11P49959 708 aa10.33□□□□□ -0.76
LMCD1-207ENST00000470776 PKN1Q16512 942 aa10.33□□□□□ -0.76
LMCD1-207ENST00000470776 ASPRV1Q53RT3 343 aa10.33□□□□□ -0.76
LMCD1-207ENST00000470776 NBPF12Q5TAG4 269 aaPredicted RBP10.33□□□□□ -0.76
LMCD1-207ENST00000470776 DCAF15Q66K64 600 aa10.33□□□□□ -0.76
LMCD1-207ENST00000470776 MIGA2Q7L4E1 593 aa10.33□□□□□ -0.76
LMCD1-207ENST00000470776 TRIM22Q8IYM9 498 aa10.33□□□□□ -0.76
LMCD1-207ENST00000470776 FAM177A1Q8N128 213 aaPredicted RBP10.33□□□□□ -0.76
LMCD1-207ENST00000470776 GMCL1P1Q8NEA9 526 aa10.33□□□□□ -0.76
LMCD1-207ENST00000470776 PHKBQ93100 1093 aa10.33□□□□□ -0.76
LMCD1-207ENST00000470776 SPZ1Q9BXG8 430 aa10.33□□□□□ -0.76
LMCD1-207ENST00000470776 SLC26A6Q9BXS9 759 aa10.33□□□□□ -0.76
LMCD1-207ENST00000470776 ZBTB21Q9ULJ3 1066 aa10.33□□□□□ -0.76
LMCD1-207ENST00000470776 FSD2A1L4K1 749 aa10.32□□□□□ -0.76
LMCD1-207ENST00000470776 IQCA1LA6NCM1 817 aa10.32□□□□□ -0.76
LMCD1-207ENST00000470776 TRAK2O60296 914 aa10.32□□□□□ -0.76
LMCD1-207ENST00000470776 GDF11O95390 407 aa10.32□□□□□ -0.76
LMCD1-207ENST00000470776 ASNSP08243 561 aa10.32□□□□□ -0.76
LMCD1-207ENST00000470776 PARP1P09874 1014 aaKnown RBP10.32□□□□□ -0.76
LMCD1-207ENST00000470776 EPHX2P34913 555 aa10.32□□□□□ -0.76
LMCD1-207ENST00000470776 ICA1Q05084 483 aa10.32□□□□□ -0.76
LMCD1-207ENST00000470776 ZNF543Q08ER8 600 aa10.32□□□□□ -0.76
LMCD1-207ENST00000470776 RESTQ13127 1097 aa10.32□□□□□ -0.76
LMCD1-207ENST00000470776 SHROOM1Q2M3G4 852 aaPredicted RBP10.32□□□□□ -0.76
LMCD1-207ENST00000470776 SLC35G1Q2M3R5 365 aa10.32□□□□□ -0.76
LMCD1-207ENST00000470776 SUPT20HL1Q3ZLR7 823 aa10.32□□□□□ -0.76
LMCD1-207ENST00000470776 GPATCH4Q5T3I0 446 aaKnown RBP10.32□□□□□ -0.76
LMCD1-207ENST00000470776 CDC37L1Q7L3B6 337 aa10.32□□□□□ -0.76
LMCD1-207ENST00000470776 CLEC10AQ8IUN9 316 aa10.32□□□□□ -0.76
LMCD1-207ENST00000470776 STAG2Q8N3U4 1231 aa10.32□□□□□ -0.76
LMCD1-207ENST00000470776 DCAF4Q8WV16 495 aa10.32□□□□□ -0.76
LMCD1-207ENST00000470776 C8orf76Q96K31 380 aa10.32□□□□□ -0.76
LMCD1-207ENST00000470776 ALG1Q9BT22 464 aa10.32□□□□□ -0.76
LMCD1-207ENST00000470776 ZNF341Q9BYN7 854 aa10.32□□□□□ -0.76
LMCD1-207ENST00000470776 ZSCAN16Q9H4T2 348 aaPredicted RBP10.32□□□□□ -0.76
LMCD1-207ENST00000470776 TAF1DQ9H5J8 278 aaPredicted RBP10.32□□□□□ -0.76
LMCD1-207ENST00000470776 RIOX1Q9H6W3 641 aa10.32□□□□□ -0.76
LMCD1-207ENST00000470776 TMX2Q9Y320 296 aa10.32□□□□□ -0.76
LMCD1-207ENST00000470776 ATP6V1DQ9Y5K8 247 aa10.32□□□□□ -0.76
LMCD1-207ENST00000470776 A0A1W2PRG0 241 aa10.31□□□□□ -0.76
LMCD1-207ENST00000470776 VPS37CA5D8V6 355 aaPredicted RBP10.31□□□□□ -0.76
LMCD1-207ENST00000470776 USP17L5A8MUK1 530 aa10.31□□□□□ -0.76
LMCD1-207ENST00000470776 KLRF2D3W0D1 207 aa10.31□□□□□ -0.76
LMCD1-207ENST00000470776 H3BQV1 296 aa10.31□□□□□ -0.76
LMCD1-207ENST00000470776 CYTH3O43739 400 aa10.31□□□□□ -0.76
LMCD1-207ENST00000470776 PFKFB3Q16875 520 aaPredicted RBP10.31□□□□□ -0.76
LMCD1-207ENST00000470776 USP17L2Q6R6M4 530 aa10.31□□□□□ -0.76
LMCD1-207ENST00000470776 PNMA8AQ86V59 439 aaPredicted RBP10.31□□□□□ -0.76
LMCD1-207ENST00000470776 LRRC47Q8N1G4 583 aaKnown RBP10.31□□□□□ -0.76
LMCD1-207ENST00000470776 DCPSQ96C86 337 aaKnown RBP10.31□□□□□ -0.76
LMCD1-207ENST00000470776 MTMR8Q96EF0 704 aa10.31□□□□□ -0.76
LMCD1-207ENST00000470776 GMCL1Q96IK5 515 aa10.31□□□□□ -0.76
LMCD1-207ENST00000470776 SCAF8Q9UPN6 1271 aaKnown RBP10.31□□□□□ -0.76
LMCD1-207ENST00000470776 V9GY48 417 aaPredicted RBP10.31□□□□□ -0.76
LMCD1-207ENST00000470776 WDR90Q96KV7 1748 aa10.3□□□□□ -0.76
LMCD1-207ENST00000470776 F5H6K3 240 aa10.3□□□□□ -0.76
LMCD1-207ENST00000470776 PPFIA3O75145 1194 aa10.3□□□□□ -0.76
LMCD1-207ENST00000470776 HOXD11P31277 338 aaPredicted RBP10.3□□□□□ -0.76
LMCD1-207ENST00000470776 AKAP17AQ02040 695 aaKnown RBP10.3□□□□□ -0.76
LMCD1-207ENST00000470776 KLRC3Q07444 240 aa10.3□□□□□ -0.76
LMCD1-207ENST00000470776 NOL9Q5SY16 702 aaKnown RBP10.3□□□□□ -0.76
LMCD1-207ENST00000470776 SLFN13Q68D06 897 aa10.3□□□□□ -0.76
LMCD1-207ENST00000470776 KRT40Q6A162 431 aa10.3□□□□□ -0.76
LMCD1-207ENST00000470776 ATL3Q6DD88 541 aa10.3□□□□□ -0.76
LMCD1-207ENST00000470776 BTNL9Q6UXG8 535 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms