RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 BRD1O95696 1058 aa10.13□□□□□ -0.79
HDLBP-233ENST00000470710 SNHG28P0DPA3 235 aa10.13□□□□□ -0.79
HDLBP-233ENST00000470710 EEF2P13639 858 aaKnown RBP10.13□□□□□ -0.79
HDLBP-233ENST00000470710 FDPSP14324 419 aaKnown RBP10.13□□□□□ -0.79
HDLBP-233ENST00000470710 SYT1P21579 422 aa10.13□□□□□ -0.79
HDLBP-233ENST00000470710 FUT2Q10981 343 aa10.13□□□□□ -0.79
HDLBP-233ENST00000470710 RAB3GAP1Q15042 981 aa10.13□□□□□ -0.79
HDLBP-233ENST00000470710 SHROOM1Q2M3G4 852 aaPredicted RBP10.13□□□□□ -0.79
HDLBP-233ENST00000470710 CLEC10AQ8IUN9 316 aa10.13□□□□□ -0.79
HDLBP-233ENST00000470710 SIAH1Q8IUQ4 282 aa10.13□□□□□ -0.79
HDLBP-233ENST00000470710 FAM184AQ8NB25 1140 aa10.13□□□□□ -0.79
HDLBP-233ENST00000470710 DDX11Q96FC9 970 aa10.13□□□□□ -0.79
HDLBP-233ENST00000470710 ORC3Q9UBD5 711 aaPredicted RBP10.13□□□□□ -0.79
HDLBP-233ENST00000470710 SCN4AP35499 1836 aa10.12□□□□□ -0.79
HDLBP-233ENST00000470710 WDR33Q9C0J8 1336 aaKnown RBP10.12□□□□□ -0.79
HDLBP-233ENST00000470710 ADM5C9JUS6 153 aa10.12□□□□□ -0.79
HDLBP-233ENST00000470710 STX6O43752 255 aa10.12□□□□□ -0.79
HDLBP-233ENST00000470710 PARP1P09874 1014 aaKnown RBP10.12□□□□□ -0.79
HDLBP-233ENST00000470710 PDHBP11177 359 aa10.12□□□□□ -0.79
HDLBP-233ENST00000470710 VEGFAP15692 232 aaPredicted RBP10.12□□□□□ -0.79
HDLBP-233ENST00000470710 SMARCA1P28370 1054 aa10.12□□□□□ -0.79
HDLBP-233ENST00000470710 SSRP1Q08945 709 aaKnown RBP10.12□□□□□ -0.79
HDLBP-233ENST00000470710 ASPRV1Q53RT3 343 aa10.12□□□□□ -0.79
HDLBP-233ENST00000470710 NOL9Q5SY16 702 aaKnown RBP10.12□□□□□ -0.79
HDLBP-233ENST00000470710 LARP1BQ659C4 914 aaKnown RBP10.12□□□□□ -0.79
HDLBP-233ENST00000470710 NBPF11Q86T75 865 aa10.12□□□□□ -0.79
HDLBP-233ENST00000470710 USP48Q86UV5 1035 aa10.12□□□□□ -0.79
HDLBP-233ENST00000470710 TRIM22Q8IYM9 498 aa10.12□□□□□ -0.79
HDLBP-233ENST00000470710 LRRC47Q8N1G4 583 aaKnown RBP10.12□□□□□ -0.79
HDLBP-233ENST00000470710 GMCL1P1Q8NEA9 526 aa10.12□□□□□ -0.79
HDLBP-233ENST00000470710 DCAF4Q8WV16 495 aa10.12□□□□□ -0.79
HDLBP-233ENST00000470710 WASF1Q92558 559 aa10.12□□□□□ -0.79
HDLBP-233ENST00000470710 RNF26Q9BY78 433 aaPredicted RBP10.12□□□□□ -0.79
HDLBP-233ENST00000470710 RBM27Q9P2N5 1060 aaKnown RBP10.12□□□□□ -0.79
HDLBP-233ENST00000470710 MAD2L2Q9UI95 211 aa10.12□□□□□ -0.79
HDLBP-233ENST00000470710 SSC5DA1L4H1 1573 aa10.12□□□□□ -0.79
HDLBP-233ENST00000470710 USP17L5A8MUK1 530 aa10.11□□□□□ -0.79
HDLBP-233ENST00000470710 PRPF3O43395 683 aaKnown RBP10.11□□□□□ -0.79
HDLBP-233ENST00000470710 PLEKHA8P1O95397 391 aa10.11□□□□□ -0.79
HDLBP-233ENST00000470710 DEXIO95424 95 aa10.11□□□□□ -0.79
HDLBP-233ENST00000470710 ATP2B2Q01814 1243 aa10.11□□□□□ -0.79
HDLBP-233ENST00000470710 PKP1Q13835 747 aa10.11□□□□□ -0.79
HDLBP-233ENST00000470710 EAPPQ56P03 285 aaPredicted RBP10.11□□□□□ -0.79
HDLBP-233ENST00000470710 GPATCH4Q5T3I0 446 aaKnown RBP10.11□□□□□ -0.79
HDLBP-233ENST00000470710 PRAMEF18Q5VWM3 479 aa10.11□□□□□ -0.79
HDLBP-233ENST00000470710 CDC37L1Q7L3B6 337 aa10.11□□□□□ -0.79
HDLBP-233ENST00000470710 SCYL3Q8IZE3 742 aa10.11□□□□□ -0.79
HDLBP-233ENST00000470710 SRBD1Q8N5C6 995 aaKnown RBP10.11□□□□□ -0.79
HDLBP-233ENST00000470710 PHKBQ93100 1093 aa10.11□□□□□ -0.79
HDLBP-233ENST00000470710 KLRG1Q96E93 195 aa10.11□□□□□ -0.79
HDLBP-233ENST00000470710 GMCL1Q96IK5 515 aa10.11□□□□□ -0.79
HDLBP-233ENST00000470710 WRNIP1Q96S55 665 aa10.11□□□□□ -0.79
HDLBP-233ENST00000470710 SPZ1Q9BXG8 430 aa10.11□□□□□ -0.79
HDLBP-233ENST00000470710 SLC26A6Q9BXS9 759 aa10.11□□□□□ -0.79
HDLBP-233ENST00000470710 SH2D4AQ9H788 454 aa10.11□□□□□ -0.79
HDLBP-233ENST00000470710 ARHGEF10LQ9HCE6 1279 aa10.11□□□□□ -0.79
HDLBP-233ENST00000470710 MTMR6Q9Y217 621 aa10.11□□□□□ -0.79
HDLBP-233ENST00000470710 TMX2Q9Y320 296 aa10.11□□□□□ -0.79
HDLBP-233ENST00000470710 ZDHHC9Q9Y397 364 aa10.11□□□□□ -0.79
HDLBP-233ENST00000470710 CNTNAP5Q8WYK1 1306 aa10.1□□□□□ -0.79
HDLBP-233ENST00000470710 A0A1W2PRG0 241 aa10.1□□□□□ -0.79
HDLBP-233ENST00000470710 PPP1R12BO60237 982 aaPredicted RBP10.1□□□□□ -0.79
HDLBP-233ENST00000470710 DTNBO60941 627 aa10.1□□□□□ -0.79
HDLBP-233ENST00000470710 ZSCAN22P10073 491 aaPredicted RBP10.1□□□□□ -0.79
HDLBP-233ENST00000470710 INPP5BP32019 993 aa10.1□□□□□ -0.79
HDLBP-233ENST00000470710 AKAP17AQ02040 695 aaKnown RBP10.1□□□□□ -0.79
HDLBP-233ENST00000470710 ZNF543Q08ER8 600 aa10.1□□□□□ -0.79
HDLBP-233ENST00000470710 SLFN13Q68D06 897 aa10.1□□□□□ -0.79
HDLBP-233ENST00000470710 USP17L2Q6R6M4 530 aa10.1□□□□□ -0.79
HDLBP-233ENST00000470710 LDHDQ86WU2 507 aa10.1□□□□□ -0.79
HDLBP-233ENST00000470710 STAG2Q8N3U4 1231 aa10.1□□□□□ -0.79
HDLBP-233ENST00000470710 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.1□□□□□ -0.79
HDLBP-233ENST00000470710 CDCA5Q96FF9 252 aa10.1□□□□□ -0.79
HDLBP-233ENST00000470710 GOPCQ9HD26 462 aa10.1□□□□□ -0.79
HDLBP-233ENST00000470710 PICK1Q9NRD5 415 aa10.1□□□□□ -0.79
HDLBP-233ENST00000470710 KLRF2D3W0D1 207 aa10.09□□□□□ -0.79
HDLBP-233ENST00000470710 F5H6K3 240 aa10.09□□□□□ -0.79
HDLBP-233ENST00000470710 PPFIA3O75145 1194 aa10.09□□□□□ -0.79
HDLBP-233ENST00000470710 USP2O75604 605 aaPredicted RBP10.09□□□□□ -0.79
HDLBP-233ENST00000470710 NDUFB10O96000 172 aa10.09□□□□□ -0.79
HDLBP-233ENST00000470710 NF2P35240 595 aa10.09□□□□□ -0.79
HDLBP-233ENST00000470710 IREB2P48200 963 aaKnown RBP10.09□□□□□ -0.79
HDLBP-233ENST00000470710 MAP3K9P80192 1104 aa10.09□□□□□ -0.79
HDLBP-233ENST00000470710 KLRC3Q07444 240 aa10.09□□□□□ -0.79
HDLBP-233ENST00000470710 MAP3K11Q16584 847 aa10.09□□□□□ -0.79
HDLBP-233ENST00000470710 SLC35G1Q2M3R5 365 aa10.09□□□□□ -0.79
HDLBP-233ENST00000470710 CLEC17AQ6ZS10 378 aa10.09□□□□□ -0.79
HDLBP-233ENST00000470710 FAM177A1Q8N128 213 aaPredicted RBP10.09□□□□□ -0.79
HDLBP-233ENST00000470710 FBXO18Q8NFZ0 1043 aa10.09□□□□□ -0.79
HDLBP-233ENST00000470710 ACER1Q8TDN7 264 aa10.09□□□□□ -0.79
HDLBP-233ENST00000470710 TNPO1Q92973 898 aaKnown RBP10.09□□□□□ -0.79
HDLBP-233ENST00000470710 C8orf76Q96K31 380 aa10.09□□□□□ -0.79
HDLBP-233ENST00000470710 ALG1Q9BT22 464 aa10.09□□□□□ -0.79
HDLBP-233ENST00000470710 WDR18Q9BV38 432 aa10.09□□□□□ -0.79
HDLBP-233ENST00000470710 GLIS2Q9BZE0 524 aaPredicted RBP10.09□□□□□ -0.79
HDLBP-233ENST00000470710 KIAA1683Q9H0B3 1180 aa10.09□□□□□ -0.79
HDLBP-233ENST00000470710 RRAGCQ9HB90 399 aa10.09□□□□□ -0.79
HDLBP-233ENST00000470710 MTMR7Q9Y216 660 aa10.09□□□□□ -0.79
HDLBP-233ENST00000470710 V9GY48 417 aaPredicted RBP10.09□□□□□ -0.79
HDLBP-233ENST00000470710 MYH8P13535 1937 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms