RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 PAK2Q13177 524 aa6.73□□□□□ -1.33
COL9A1-206ENST00000470652 COL9A2Q14055 689 aaPredicted RBP6.73□□□□□ -1.33
COL9A1-206ENST00000470652 LCE4AQ5TA78 99 aa6.73□□□□□ -1.33
COL9A1-206ENST00000470652 ANGEL2Q5VTE6 544 aaKnown RBP6.73□□□□□ -1.33
COL9A1-206ENST00000470652 CDKAL1Q5VV42 579 aa6.73□□□□□ -1.33
COL9A1-206ENST00000470652 THAP5Q7Z6K1 395 aa6.73□□□□□ -1.33
COL9A1-206ENST00000470652 BAHD1Q8TBE0 780 aaPredicted RBP6.73□□□□□ -1.33
COL9A1-206ENST00000470652 RNF141Q8WVD5 230 aa6.73□□□□□ -1.33
COL9A1-206ENST00000470652 HSPA12BQ96MM6 686 aa6.73□□□□□ -1.33
COL9A1-206ENST00000470652 KIF2CQ99661 725 aa6.73□□□□□ -1.33
COL9A1-206ENST00000470652 CNNM2Q9H8M5 875 aa6.73□□□□□ -1.33
COL9A1-206ENST00000470652 KCNH3Q9ULD8 1083 aa6.73□□□□□ -1.33
COL9A1-206ENST00000470652 ST14Q9Y5Y6 855 aa6.73□□□□□ -1.33
COL9A1-206ENST00000470652 PITPNM2Q9BZ72 1349 aa6.73□□□□□ -1.33
COL9A1-206ENST00000470652 MEIS3P2A8K0S8 358 aa6.72□□□□□ -1.33
COL9A1-206ENST00000470652 PKN1Q16512 942 aa6.72□□□□□ -1.33
COL9A1-206ENST00000470652 FBLN7Q53RD9 439 aa6.72□□□□□ -1.33
COL9A1-206ENST00000470652 OVOS1Q6IE37 1185 aa6.72□□□□□ -1.33
COL9A1-206ENST00000470652 WFDC3Q8IUB2 231 aa6.72□□□□□ -1.33
COL9A1-206ENST00000470652 TMEM40Q8WWA1 233 aa6.72□□□□□ -1.33
COL9A1-206ENST00000470652 ZNF428Q96B54 188 aa6.72□□□□□ -1.33
COL9A1-206ENST00000470652 ATG4CQ96DT6 458 aa6.72□□□□□ -1.33
COL9A1-206ENST00000470652 KREMEN1Q96MU8 473 aa6.72□□□□□ -1.33
COL9A1-206ENST00000470652 ASPNQ9BXN1 380 aa6.72□□□□□ -1.33
COL9A1-206ENST00000470652 TGIF2Q9GZN2 237 aa6.72□□□□□ -1.33
COL9A1-206ENST00000470652 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.72□□□□□ -1.33
COL9A1-206ENST00000470652 SEMA3GQ9NS98 782 aa6.72□□□□□ -1.33
COL9A1-206ENST00000470652 ZNRF3Q9ULT6 936 aa6.72□□□□□ -1.33
COL9A1-206ENST00000470652 FUT4P22083 530 aa6.71□□□□□ -1.34
COL9A1-206ENST00000470652 CD96P40200 585 aa6.71□□□□□ -1.34
COL9A1-206ENST00000470652 CCNFP41002 786 aa6.71□□□□□ -1.34
COL9A1-206ENST00000470652 RBM25P49756 843 aaKnown RBP6.71□□□□□ -1.34
COL9A1-206ENST00000470652 RAD51AP2Q09MP3 1159 aa6.71□□□□□ -1.34
COL9A1-206ENST00000470652 IKZF1Q13422 519 aa6.71□□□□□ -1.34
COL9A1-206ENST00000470652 NLRC3Q7RTR2 1065 aa6.71□□□□□ -1.34
COL9A1-206ENST00000470652 ATG4DQ86TL0 474 aaPredicted RBP6.71□□□□□ -1.34
COL9A1-206ENST00000470652 GPRASP2Q96D09 838 aa6.71□□□□□ -1.34
COL9A1-206ENST00000470652 Q96M66 194 aa6.71□□□□□ -1.34
COL9A1-206ENST00000470652 FERD3LQ96RJ6 166 aa6.71□□□□□ -1.34
COL9A1-206ENST00000470652 H3BS24 57 aa6.7□□□□□ -1.34
COL9A1-206ENST00000470652 NME1P15531 152 aaKnown RBP6.7□□□□□ -1.34
COL9A1-206ENST00000470652 INTS3Q68E01 1043 aaKnown RBP6.7□□□□□ -1.34
COL9A1-206ENST00000470652 KSR1Q8IVT5 923 aa6.7□□□□□ -1.34
COL9A1-206ENST00000470652 DTWD2Q8NBA8 298 aa6.7□□□□□ -1.34
COL9A1-206ENST00000470652 PI4K2BQ8TCG2 481 aa6.7□□□□□ -1.34
COL9A1-206ENST00000470652 RASGRP4Q8TDF6 673 aa6.7□□□□□ -1.34
COL9A1-206ENST00000470652 FAM168AQ92567 244 aa6.7□□□□□ -1.34
COL9A1-206ENST00000470652 KRTAP4-2Q9BYR5 136 aa6.7□□□□□ -1.34
COL9A1-206ENST00000470652 TRIT1Q9H3H1 467 aaKnown RBP6.7□□□□□ -1.34
COL9A1-206ENST00000470652 RC3H2Q9HBD1 1191 aaKnown RBP6.7□□□□□ -1.34
COL9A1-206ENST00000470652 LMCD1Q9NZU5 365 aa6.7□□□□□ -1.34
COL9A1-206ENST00000470652 TNFRSF10CO14798 259 aa6.69□□□□□ -1.34
COL9A1-206ENST00000470652 UBOX5O94941 541 aa6.69□□□□□ -1.34
COL9A1-206ENST00000470652 TCF3P15923 654 aa6.69□□□□□ -1.34
COL9A1-206ENST00000470652 GJA8P48165 433 aa6.69□□□□□ -1.34
COL9A1-206ENST00000470652 RNF4P78317 190 aa6.69□□□□□ -1.34
COL9A1-206ENST00000470652 ZP2Q05996 745 aa6.69□□□□□ -1.34
COL9A1-206ENST00000470652 SLC23A3Q6PIS1 610 aa6.69□□□□□ -1.34
COL9A1-206ENST00000470652 UBE2FQ969M7 185 aa6.69□□□□□ -1.34
COL9A1-206ENST00000470652 VWCEQ96DN2 955 aa6.69□□□□□ -1.34
COL9A1-206ENST00000470652 GPR62Q9BZJ7 368 aa6.69□□□□□ -1.34
COL9A1-206ENST00000470652 ANTXR1Q9H6X2 564 aa6.69□□□□□ -1.34
COL9A1-206ENST00000470652 CCSER2Q9H7U1 834 aa6.69□□□□□ -1.34
COL9A1-206ENST00000470652 ATP13A1Q9HD20 1204 aa6.69□□□□□ -1.34
COL9A1-206ENST00000470652 GPATCH2Q9NW75 528 aa6.69□□□□□ -1.34
COL9A1-206ENST00000470652 ZSWIM5Q9P217 1185 aa6.69□□□□□ -1.34
COL9A1-206ENST00000470652 RNASE1P07998 156 aaKnown RBP6.68□□□□□ -1.34
COL9A1-206ENST00000470652 SOX9P48436 509 aa6.68□□□□□ -1.34
COL9A1-206ENST00000470652 FBXW10Q5XX13 1052 aa6.68□□□□□ -1.34
COL9A1-206ENST00000470652 TMPRSS7Q7RTY8 843 aa6.68□□□□□ -1.34
COL9A1-206ENST00000470652 RBBP8NLQ8NC74 664 aaPredicted RBP6.68□□□□□ -1.34
COL9A1-206ENST00000470652 TM9SF2Q99805 663 aa6.68□□□□□ -1.34
COL9A1-206ENST00000470652 DUSP15Q9H1R2 295 aaPredicted RBP6.68□□□□□ -1.34
COL9A1-206ENST00000470652 GINM1Q9NU53 330 aa6.68□□□□□ -1.34
COL9A1-206ENST00000470652 MBNL3Q9NUK0 354 aaKnown RBP6.68□□□□□ -1.34
COL9A1-206ENST00000470652 PPT2Q9UMR5 302 aa6.68□□□□□ -1.34
COL9A1-206ENST00000470652 EFR3BQ9Y2G0 817 aa6.68□□□□□ -1.34
COL9A1-206ENST00000470652 INPP5FQ9Y2H2 1132 aa6.68□□□□□ -1.34
COL9A1-206ENST00000470652 LRRN2O75325 713 aa6.67□□□□□ -1.34
COL9A1-206ENST00000470652 SRFP11831 508 aa6.67□□□□□ -1.34
COL9A1-206ENST00000470652 ERCC5P28715 1186 aaPredicted RBP6.67□□□□□ -1.34
COL9A1-206ENST00000470652 POLR2BP30876 1174 aaKnown RBP6.67□□□□□ -1.34
COL9A1-206ENST00000470652 SPOCD1Q6ZMY3 1216 aa6.67□□□□□ -1.34
COL9A1-206ENST00000470652 TAB3Q8N5C8 712 aaPredicted RBP6.67□□□□□ -1.34
COL9A1-206ENST00000470652 CRBNQ96SW2 442 aa6.67□□□□□ -1.34
COL9A1-206ENST00000470652 SLC38A3Q99624 504 aa6.67□□□□□ -1.34
COL9A1-206ENST00000470652 ACBD3Q9H3P7 528 aa6.67□□□□□ -1.34
COL9A1-206ENST00000470652 CECR2Q9BXF3 1484 aa6.66□□□□□ -1.34
COL9A1-206ENST00000470652 E9PSI1 815 aa6.66□□□□□ -1.34
COL9A1-206ENST00000470652 CLEC3AO75596 197 aa6.66□□□□□ -1.34
COL9A1-206ENST00000470652 NBPF12Q5TAG4 269 aaPredicted RBP6.66□□□□□ -1.34
COL9A1-206ENST00000470652 SEC16BQ96JE7 1060 aa6.66□□□□□ -1.34
COL9A1-206ENST00000470652 DHRS1Q96LJ7 313 aa6.66□□□□□ -1.34
COL9A1-206ENST00000470652 SLC9A7Q96T83 725 aa6.66□□□□□ -1.34
COL9A1-206ENST00000470652 ASCC2Q9H1I8 757 aaPredicted RBP6.66□□□□□ -1.34
COL9A1-206ENST00000470652 CARS2Q9HA77 564 aaKnown RBP6.66□□□□□ -1.34
COL9A1-206ENST00000470652 ADAMTS6Q9UKP5 1117 aa6.66□□□□□ -1.34
COL9A1-206ENST00000470652 RBAK-RBAKDNI3L0D1 243 aa6.65□□□□□ -1.34
COL9A1-206ENST00000470652 TPP2P29144 1249 aaPredicted RBP6.65□□□□□ -1.34
COL9A1-206ENST00000470652 TSPYL5Q86VY4 417 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms