RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 OSBPL5Q9H0X9 879 aaPredicted RBP12.03□□□□□ -0.48
CHD3-208ENST00000470531 HPS5Q9UPZ3 1129 aa12.03□□□□□ -0.48
CHD3-208ENST00000470531 CACNB1Q02641 598 aaPredicted RBP12.03□□□□□ -0.48
CHD3-208ENST00000470531 PDE4DQ08499 809 aa12.03□□□□□ -0.48
CHD3-208ENST00000470531 NELFCDQ8IXH7 590 aa12.03□□□□□ -0.48
CHD3-208ENST00000470531 MB21D2Q8IYB1 491 aaPredicted RBP12.03□□□□□ -0.48
CHD3-208ENST00000470531 PROCA1Q8NCQ7 364 aaPredicted RBP12.03□□□□□ -0.48
CHD3-208ENST00000470531 CNNM2Q9H8M5 875 aa12.03□□□□□ -0.48
CHD3-208ENST00000470531 EXOC1Q9NV70 894 aa12.03□□□□□ -0.48
CHD3-208ENST00000470531 SH3TC1Q8TE82 1336 aa12.03□□□□□ -0.48
CHD3-208ENST00000470531 GOLGA6L9A6NEM1 432 aa12.03□□□□□ -0.48
CHD3-208ENST00000470531 EFCAB8A8MWE9 144 aa12.03□□□□□ -0.48
CHD3-208ENST00000470531 CYP2D6P10635 497 aa12.03□□□□□ -0.48
CHD3-208ENST00000470531 TNNI2P48788 182 aa12.03□□□□□ -0.48
CHD3-208ENST00000470531 GUCY2FP51841 1108 aa12.03□□□□□ -0.48
CHD3-208ENST00000470531 SND1Q7KZF4 910 aaKnown RBP eCLIP12.03□□□□□ -0.48
CHD3-208ENST00000470531 ANKRD18AQ8IVF6 992 aa12.03□□□□□ -0.48
CHD3-208ENST00000470531 TTLL11Q8NHH1 800 aa12.03□□□□□ -0.48
CHD3-208ENST00000470531 NKX2-3Q8TAU0 364 aa12.03□□□□□ -0.48
CHD3-208ENST00000470531 PSDA5PKW4 1024 aaPredicted RBP12.02□□□□□ -0.48
CHD3-208ENST00000470531 B4DLN1 442 aa12.02□□□□□ -0.48
CHD3-208ENST00000470531 PAK1Q13153 545 aa12.02□□□□□ -0.48
CHD3-208ENST00000470531 CCDC93Q567U6 631 aa12.02□□□□□ -0.48
CHD3-208ENST00000470531 KANK3Q6NY19 840 aa12.02□□□□□ -0.48
CHD3-208ENST00000470531 DTHD1Q6ZMT9 781 aa12.02□□□□□ -0.48
CHD3-208ENST00000470531 HDXQ7Z353 690 aa12.02□□□□□ -0.48
CHD3-208ENST00000470531 ADAT2Q7Z6V5 191 aaKnown RBP12.02□□□□□ -0.48
CHD3-208ENST00000470531 RASSF4Q9H2L5 321 aa12.02□□□□□ -0.48
CHD3-208ENST00000470531 SLC39A2Q9NP94 309 aa12.02□□□□□ -0.48
CHD3-208ENST00000470531 FAM53CQ9NYF3 392 aa12.02□□□□□ -0.48
CHD3-208ENST00000470531 SMARCAL1Q9NZC9 954 aa12.02□□□□□ -0.48
CHD3-208ENST00000470531 SAMM50Q9Y512 469 aa12.02□□□□□ -0.48
CHD3-208ENST00000470531 PTPRUQ92729 1446 aa12.02□□□□□ -0.48
CHD3-208ENST00000470531 MNAT1P51948 309 aa12.02□□□□□ -0.49
CHD3-208ENST00000470531 KIF5AQ12840 1032 aa12.02□□□□□ -0.49
CHD3-208ENST00000470531 E2F4Q16254 413 aa12.02□□□□□ -0.49
CHD3-208ENST00000470531 CHP1Q99653 195 aa12.02□□□□□ -0.49
CHD3-208ENST00000470531 ADAM21Q9UKJ8 722 aa12.02□□□□□ -0.49
CHD3-208ENST00000470531 PSMA7O14818 248 aa12.02□□□□□ -0.49
CHD3-208ENST00000470531 CCNT1O60563 726 aaKnown RBP12.02□□□□□ -0.49
CHD3-208ENST00000470531 TADA3O75528 432 aa12.02□□□□□ -0.49
CHD3-208ENST00000470531 TBC1D8O95759 1140 aa12.02□□□□□ -0.49
CHD3-208ENST00000470531 CHRM1P11229 460 aaPredicted RBP12.02□□□□□ -0.49
CHD3-208ENST00000470531 CUL4BQ13620 913 aa12.02□□□□□ -0.49
CHD3-208ENST00000470531 PLS1Q14651 629 aa12.02□□□□□ -0.49
CHD3-208ENST00000470531 LRRC41Q15345 812 aa12.02□□□□□ -0.49
CHD3-208ENST00000470531 CCDC152Q4G0S7 254 aa12.02□□□□□ -0.49
CHD3-208ENST00000470531 USPL1Q5W0Q7 1092 aa12.02□□□□□ -0.49
CHD3-208ENST00000470531 C2CD5Q86YS7 1000 aa12.02□□□□□ -0.49
CHD3-208ENST00000470531 CEP112Q8N8E3 955 aa12.02□□□□□ -0.49
CHD3-208ENST00000470531 SMCR8Q8TEV9 937 aaPredicted RBP12.02□□□□□ -0.49
CHD3-208ENST00000470531 LPIN2Q92539 896 aa12.02□□□□□ -0.49
CHD3-208ENST00000470531 NOC4LQ9BVI4 516 aaKnown RBP12.02□□□□□ -0.49
CHD3-208ENST00000470531 USP31Q70CQ4 1352 aa12.02□□□□□ -0.49
CHD3-208ENST00000470531 KCNJ18B7U540 433 aa12.01□□□□□ -0.49
CHD3-208ENST00000470531 PAFAH1B1P43034 410 aa12.01□□□□□ -0.49
CHD3-208ENST00000470531 TFAP4Q01664 338 aa12.01□□□□□ -0.49
CHD3-208ENST00000470531 KCNJ12Q14500 433 aa12.01□□□□□ -0.49
CHD3-208ENST00000470531 CNGA4Q8IV77 575 aa12.01□□□□□ -0.49
CHD3-208ENST00000470531 MAPKAPK5Q8IW41 473 aa12.01□□□□□ -0.49
CHD3-208ENST00000470531 ZBTB38Q8NAP3 1195 aaPredicted RBP12.01□□□□□ -0.49
CHD3-208ENST00000470531 DYNLL2Q96FJ2 89 aa12.01□□□□□ -0.49
CHD3-208ENST00000470531 PARP3Q9Y6F1 533 aa12.01□□□□□ -0.49
CHD3-208ENST00000470531 C6orf229H3BNL8 230 aa12.01□□□□□ -0.49
CHD3-208ENST00000470531 KIAA0754O94854 1291 aa12.01□□□□□ -0.49
CHD3-208ENST00000470531 USP8P40818 1118 aa12.01□□□□□ -0.49
CHD3-208ENST00000470531 LIG3P49916 1009 aa12.01□□□□□ -0.49
CHD3-208ENST00000470531 CC2D1AQ6P1N0 951 aaPredicted RBP12.01□□□□□ -0.49
CHD3-208ENST00000470531 TRIM65Q6PJ69 517 aa12.01□□□□□ -0.49
CHD3-208ENST00000470531 PIGBQ92521 554 aa12.01□□□□□ -0.49
CHD3-208ENST00000470531 STRBPQ96SI9 672 aaKnown RBP12.01□□□□□ -0.49
CHD3-208ENST00000470531 ZRANB2O95218 330 aaKnown RBP eCLIP12.01□□□□□ -0.49
CHD3-208ENST00000470531 TECP42680 631 aa12.01□□□□□ -0.49
CHD3-208ENST00000470531 MORC3Q14149 939 aa12.01□□□□□ -0.49
CHD3-208ENST00000470531 KLHL7Q8IXQ5 586 aa12.01□□□□□ -0.49
CHD3-208ENST00000470531 GPR161Q8N6U8 529 aaKnown RBP12.01□□□□□ -0.49
CHD3-208ENST00000470531 FAM204AQ9H8W3 233 aa12.01□□□□□ -0.49
CHD3-208ENST00000470531 GPCPD1Q9NPB8 672 aa12.01□□□□□ -0.49
CHD3-208ENST00000470531 SEC63Q9UGP8 760 aaKnown RBP12.01□□□□□ -0.49
CHD3-208ENST00000470531 MMP1P03956 469 aa12□□□□□ -0.49
CHD3-208ENST00000470531 FXR1P51114 621 aaKnown RBP eCLIP12□□□□□ -0.49
CHD3-208ENST00000470531 NCAPHQ15003 741 aa12□□□□□ -0.49
CHD3-208ENST00000470531 RAD9BQ6WBX8 426 aa12□□□□□ -0.49
CHD3-208ENST00000470531 PLEKHG1Q9ULL1 1385 aa12□□□□□ -0.49
CHD3-208ENST00000470531 TLDC2A0PJX2 215 aa12□□□□□ -0.49
CHD3-208ENST00000470531 H3BQF6 201 aa12□□□□□ -0.49
CHD3-208ENST00000470531 PDE8AO60658 829 aa12□□□□□ -0.49
CHD3-208ENST00000470531 ABL1P00519 1130 aa12□□□□□ -0.49
CHD3-208ENST00000470531 CALRP27797 417 aaKnown RBP12□□□□□ -0.49
CHD3-208ENST00000470531 C2orf54Q08AI8 447 aa12□□□□□ -0.49
CHD3-208ENST00000470531 FOXR1Q6PIV2 292 aa12□□□□□ -0.49
CHD3-208ENST00000470531 KRT26Q7Z3Y9 468 aa12□□□□□ -0.49
CHD3-208ENST00000470531 CADPS2Q86UW7 1296 aa12□□□□□ -0.49
CHD3-208ENST00000470531 JAKMIP2Q96AA8 810 aa12□□□□□ -0.49
CHD3-208ENST00000470531 C3P01024 1663 aa12□□□□□ -0.49
CHD3-208ENST00000470531 FAM208AQ9UK61 1670 aaKnown RBP12□□□□□ -0.49
CHD3-208ENST00000470531 MYO1CO00159 1063 aa12□□□□□ -0.49
CHD3-208ENST00000470531 RIMBP2O15034 1052 aa12□□□□□ -0.49
CHD3-208ENST00000470531 ZNF185O15231 689 aa12□□□□□ -0.49
CHD3-208ENST00000470531 NLRP10Q86W26 655 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms