RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 PTGS1P23219 599 aa9.2□□□□□ -0.94
SMC4-212ENST00000470240 NT5C2P49902 561 aa9.2□□□□□ -0.94
SMC4-212ENST00000470240 NLRP12P59046 1061 aa9.2□□□□□ -0.94
SMC4-212ENST00000470240 CHRNDQ07001 517 aa9.2□□□□□ -0.94
SMC4-212ENST00000470240 SNW1Q13573 536 aaKnown RBP9.2□□□□□ -0.94
SMC4-212ENST00000470240 SLC39A14Q15043 492 aa9.2□□□□□ -0.94
SMC4-212ENST00000470240 CCDC186Q7Z3E2 898 aa9.2□□□□□ -0.94
SMC4-212ENST00000470240 NUTM2AQ8IVF1 878 aaPredicted RBP9.2□□□□□ -0.94
SMC4-212ENST00000470240 ACSBG1Q96GR2 724 aa9.2□□□□□ -0.94
SMC4-212ENST00000470240 SLC26A6Q9BXS9 759 aa9.2□□□□□ -0.94
SMC4-212ENST00000470240 FTOQ9C0B1 505 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMC4-212ENST00000470240 GOLPH3LQ9H4A5 285 aa9.2□□□□□ -0.94
SMC4-212ENST00000470240 ARMT1Q9H993 441 aa9.2□□□□□ -0.94
SMC4-212ENST00000470240 LY9Q9HBG7 655 aa9.2□□□□□ -0.94
SMC4-212ENST00000470240 IMPACTQ9P2X3 320 aa9.2□□□□□ -0.94
SMC4-212ENST00000470240 DACH1Q9UI36 760 aa9.2□□□□□ -0.94
SMC4-212ENST00000470240 NEDD4P46934 1319 aa9.2□□□□□ -0.94
SMC4-212ENST00000470240 SPATA31A5Q5VU36 1347 aa9.2□□□□□ -0.94
SMC4-212ENST00000470240 SPATA31A7Q8IWB4 1347 aa9.2□□□□□ -0.94
SMC4-212ENST00000470240 COL5A3P25940 1745 aaPredicted RBP9.19□□□□□ -0.94
SMC4-212ENST00000470240 MYO5AQ9Y4I1 1855 aaKnown RBP9.19□□□□□ -0.94
SMC4-212ENST00000470240 A0A1B0GVL5 298 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 KIF2AO00139 706 aaPredicted RBP9.19□□□□□ -0.94
SMC4-212ENST00000470240 CCP110O43303 1012 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 ZNF202O95125 648 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 DEXIO95424 95 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 BMP15O95972 392 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 PFKFB1P16118 471 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 IFNAR1P17181 557 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 CLK2P49760 499 aaKnown RBP9.19□□□□□ -0.94
SMC4-212ENST00000470240 NDUFA8P51970 172 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 TRIM32Q13049 653 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 IQCB1Q15051 598 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 RILPL1Q5EBL4 403 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 PRPF38BQ5VTL8 546 aaKnown RBP9.19□□□□□ -0.94
SMC4-212ENST00000470240 OTUD7BQ6GQQ9 843 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 C11orf57Q6ZUT1 292 aaPredicted RBP9.19□□□□□ -0.94
SMC4-212ENST00000470240 CYB5R4Q7L1T6 521 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 IQCA1Q86XH1 822 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 RAB11FIP4Q86YS3 637 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 MPNDQ8N594 471 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 AOPEPQ8N6M6 819 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 CCDC150Q8NCX0 1101 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 IGDCC4Q8TDY8 1250 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 TSC1Q92574 1164 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 ANKRD2Q9GZV1 360 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 RBM28Q9NW13 759 aaKnown RBP9.19□□□□□ -0.94
SMC4-212ENST00000470240 LIMD1Q9UGP4 676 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 CLIC4Q9Y696 253 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 SCN7AQ01118 1682 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 ECM29Q5VYK3 1845 aa9.19□□□□□ -0.94
SMC4-212ENST00000470240 GSG1L2A8MUP6 293 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 NPHP1O15259 732 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 PPFIA3O75145 1194 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 SMC2O95347 1197 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 CCNYL3P0C7X3 344 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 U2AF2P26368 475 aaKnown RBP eCLIP9.18□□□□□ -0.943e-8■■■■■ 49.6
SMC4-212ENST00000470240 PRR20EP86478 221 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 PRR20CP86479 221 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 PRR20DP86480 221 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 PRR20BP86481 221 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 PRR20AP86496 221 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 CTDSPL2Q05D32 466 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 PPARAQ07869 468 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 SF3B3Q15393 1217 aaKnown RBP9.18□□□□□ -0.94
SMC4-212ENST00000470240 KANK3Q6NY19 840 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 TRIM67Q6ZTA4 783 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 CATIPQ7Z7H3 387 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 NOSTRINQ8IVI9 506 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 AMOTL1Q8IY63 956 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 CCDC144CPQ8IYA2 1237 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 LCORLQ8N3X6 602 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 CNTNAP4Q9C0A0 1308 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 FOXP1Q9H334 677 aaPredicted RBP9.18□□□□□ -0.94
SMC4-212ENST00000470240 EPB41L4AQ9HCS5 686 aaPredicted RBP9.18□□□□□ -0.94
SMC4-212ENST00000470240 SEC31BQ9NQW1 1179 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 BSDC1Q9NW68 430 aaPredicted RBP9.18□□□□□ -0.94
SMC4-212ENST00000470240 ZSWIM5Q9P217 1185 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 ABCF2Q9UG63 623 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 MYH13Q9UKX3 1938 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 PAXBP1Q9Y5B6 917 aa9.18□□□□□ -0.94
SMC4-212ENST00000470240 MAST2Q6P0Q8 1798 aa9.17□□□□□ -0.94
SMC4-212ENST00000470240 ZNF804BA4D1E1 1349 aa9.17□□□□□ -0.94
SMC4-212ENST00000470240 PDS5AQ29RF7 1337 aaKnown RBP9.17□□□□□ -0.94
SMC4-212ENST00000470240 IKBKBO14920 756 aa9.17□□□□□ -0.94
SMC4-212ENST00000470240 MMP1P03956 469 aa9.17□□□□□ -0.94
SMC4-212ENST00000470240 TUBB4AP04350 444 aa9.17□□□□□ -0.94
SMC4-212ENST00000470240 CDC27P30260 824 aa9.17□□□□□ -0.94
SMC4-212ENST00000470240 PTPRNQ16849 979 aa9.17□□□□□ -0.94
SMC4-212ENST00000470240 TPD52L1Q16890 204 aaPredicted RBP9.17□□□□□ -0.94
SMC4-212ENST00000470240 SPTY2D1Q68D10 685 aaPredicted RBP9.17□□□□□ -0.94
SMC4-212ENST00000470240 DESI1Q6ICB0 168 aa9.17□□□□□ -0.94
SMC4-212ENST00000470240 ELOA2Q8IYF1 753 aaPredicted RBP9.17□□□□□ -0.94
SMC4-212ENST00000470240 ZNF654Q8IZM8 581 aa9.17□□□□□ -0.94
SMC4-212ENST00000470240 MARCH10Q8NA82 808 aaPredicted RBP9.17□□□□□ -0.94
SMC4-212ENST00000470240 CNNM3Q8NE01 707 aa9.17□□□□□ -0.94
SMC4-212ENST00000470240 NUP133Q8WUM0 1156 aa9.17□□□□□ -0.94
SMC4-212ENST00000470240 PHKBQ93100 1093 aa9.17□□□□□ -0.94
SMC4-212ENST00000470240 NLRP3Q96P20 1036 aa9.17□□□□□ -0.94
SMC4-212ENST00000470240 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms