RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 PRAMEF19Q5SWL8 479 aa14.78□□□□□ -0.04
LSM2-209ENST00000470083 RASIP1Q5U651 963 aa14.78□□□□□ -0.04
LSM2-209ENST00000470083 CCDC174Q6PII3 467 aa14.78□□□□□ -0.04
LSM2-209ENST00000470083 ATF7IPQ6VMQ6 1270 aa14.78□□□□□ -0.04
LSM2-209ENST00000470083 CCDC129Q6ZRS4 1044 aa14.78□□□□□ -0.04
LSM2-209ENST00000470083 RNF180Q86T96 592 aa14.78□□□□□ -0.04
LSM2-209ENST00000470083 SLC44A5Q8NCS7 719 aa14.78□□□□□ -0.04
LSM2-209ENST00000470083 MOV10L1Q9BXT6 1211 aaKnown RBP14.78□□□□□ -0.04
LSM2-209ENST00000470083 XPNPEP3Q9NQH7 507 aa14.78□□□□□ -0.04
LSM2-209ENST00000470083 AATFQ9NY61 560 aaKnown RBP eCLIP14.78□□□□□ -0.04
LSM2-209ENST00000470083 SLC5A4Q9NY91 659 aa14.78□□□□□ -0.04
LSM2-209ENST00000470083 TIMP1P01033 207 aa14.77□□□□□ -0.05
LSM2-209ENST00000470083 HLA-DOAP06340 250 aa14.77□□□□□ -0.05
LSM2-209ENST00000470083 RARBP10826 455 aa14.77□□□□□ -0.05
LSM2-209ENST00000470083 IGFBP4P22692 258 aa14.77□□□□□ -0.05
LSM2-209ENST00000470083 PPP4CP60510 307 aa14.77□□□□□ -0.05
LSM2-209ENST00000470083 SHCBP1Q8NEM2 672 aa14.77□□□□□ -0.05
LSM2-209ENST00000470083 LRFN3Q9BTN0 628 aa14.77□□□□□ -0.05
LSM2-209ENST00000470083 TSPYL2Q9H2G4 693 aaPredicted RBP14.77□□□□□ -0.05
LSM2-209ENST00000470083 RPAP3Q9H6T3 665 aaPredicted RBP14.77□□□□□ -0.05
LSM2-209ENST00000470083 LRP2BPQ9P2M1 347 aa14.77□□□□□ -0.05
LSM2-209ENST00000470083 NRBP1Q9UHY1 535 aa14.77□□□□□ -0.05
LSM2-209ENST00000470083 ZNF236Q9UL36 1845 aa14.77□□□□□ -0.05
LSM2-209ENST00000470083 GRXCR1A8MXD5 290 aa14.76□□□□□ -0.05
LSM2-209ENST00000470083 DCDC2CA8MYV0 355 aa14.76□□□□□ -0.05
LSM2-209ENST00000470083 ERCC3P19447 782 aa14.76□□□□□ -0.05
LSM2-209ENST00000470083 ARID4AP29374 1257 aaPredicted RBP14.76□□□□□ -0.05
LSM2-209ENST00000470083 PPIGQ13427 754 aaKnown RBP eCLIP14.76□□□□□ -0.05
LSM2-209ENST00000470083 TMEM240Q5SV17 173 aa14.76□□□□□ -0.05
LSM2-209ENST00000470083 NAA16Q6N069 864 aaPredicted RBP14.76□□□□□ -0.05
LSM2-209ENST00000470083 TATDN1Q6P1N9 297 aa14.76□□□□□ -0.05
LSM2-209ENST00000470083 ABRAQ8N0Z2 381 aa14.76□□□□□ -0.05
LSM2-209ENST00000470083 MAML3Q96JK9 1138 aa14.76□□□□□ -0.05
LSM2-209ENST00000470083 SPATC1LQ9H0A9 340 aa14.76□□□□□ -0.05
LSM2-209ENST00000470083 TBX21Q9UL17 535 aa14.76□□□□□ -0.05
LSM2-209ENST00000470083 ROBO3Q96MS0 1386 aa14.75□□□□□ -0.05
LSM2-209ENST00000470083 PGK1P00558 417 aa14.75□□□□□ -0.05
LSM2-209ENST00000470083 TFCP2Q12800 502 aa14.75□□□□□ -0.05
LSM2-209ENST00000470083 RAB3GAP1Q15042 981 aa14.75□□□□□ -0.05
LSM2-209ENST00000470083 RAB30Q15771 203 aa14.75□□□□□ -0.05
LSM2-209ENST00000470083 AAK1Q2M2I8 961 aa14.75□□□□□ -0.05
LSM2-209ENST00000470083 MFSD5Q6N075 450 aa14.75□□□□□ -0.05
LSM2-209ENST00000470083 C16orf59Q7L2K0 433 aa14.75□□□□□ -0.05
LSM2-209ENST00000470083 ACER1Q8TDN7 264 aa14.75□□□□□ -0.05
LSM2-209ENST00000470083 SAP30BPQ9UHR5 308 aaKnown RBP14.75□□□□□ -0.05
LSM2-209ENST00000470083 MSRAQ9UJ68 235 aa14.75□□□□□ -0.05
LSM2-209ENST00000470083 MUC6Q6W4X9 2439 aa14.75□□□□□ -0.05
LSM2-209ENST00000470083 MYO9BQ13459 2157 aa14.74□□□□□ -0.05
LSM2-209ENST00000470083 REV3LO60673 3130 aa14.74□□□□□ -0.05
LSM2-209ENST00000470083 MCAMP43121 646 aa14.74□□□□□ -0.05
LSM2-209ENST00000470083 TMEM31Q5JXX7 168 aa14.74□□□□□ -0.05
LSM2-209ENST00000470083 GORABQ5T7V8 394 aa14.74□□□□□ -0.05
LSM2-209ENST00000470083 NEUROD6Q96NK8 337 aa14.74□□□□□ -0.05
LSM2-209ENST00000470083 TSEN34Q9BSV6 310 aaKnown RBP14.74□□□□□ -0.05
LSM2-209ENST00000470083 MROH8Q9H579 483 aa14.74□□□□□ -0.05
LSM2-209ENST00000470083 HOXC10Q9NYD6 342 aa14.74□□□□□ -0.05
LSM2-209ENST00000470083 HDAC5Q9UQL6 1122 aa14.74□□□□□ -0.05
LSM2-209ENST00000470083 TFF2Q03403 129 aa14.73□□□□□ -0.05
LSM2-209ENST00000470083 COG2Q14746 738 aa14.73□□□□□ -0.05
LSM2-209ENST00000470083 PSRC1Q6PGN9 363 aaPredicted RBP14.73□□□□□ -0.05
LSM2-209ENST00000470083 ADGRA1Q86SQ6 560 aa14.73□□□□□ -0.05
LSM2-209ENST00000470083 MB21D1Q8N884 522 aa14.73□□□□□ -0.05
LSM2-209ENST00000470083 NUP133Q8WUM0 1156 aa14.73□□□□□ -0.05
LSM2-209ENST00000470083 SSH1Q8WYL5 1049 aa14.73□□□□□ -0.05
LSM2-209ENST00000470083 EPHX3Q9H6B9 360 aa14.73□□□□□ -0.05
LSM2-209ENST00000470083 STARD7Q9NQZ5 370 aa14.73□□□□□ -0.05
LSM2-209ENST00000470083 ADAMTS4O75173 837 aa14.72□□□□□ -0.05
LSM2-209ENST00000470083 ACLYP53396 1101 aa14.72□□□□□ -0.05
LSM2-209ENST00000470083 EHD4Q9H223 541 aa14.72□□□□□ -0.05
LSM2-209ENST00000470083 SLC28A3Q9HAS3 691 aa14.72□□□□□ -0.05
LSM2-209ENST00000470083 SERPINB13Q9UIV8 391 aa14.72□□□□□ -0.05
LSM2-209ENST00000470083 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.72□□□□□ -0.05
LSM2-209ENST00000470083 MROH7Q68CQ1 1323 aa14.71□□□□□ -0.05
LSM2-209ENST00000470083 MOXD2PA6NHM9 499 aa14.71□□□□□ -0.05
LSM2-209ENST00000470083 ERC2O15083 957 aa14.71□□□□□ -0.05
LSM2-209ENST00000470083 UQCRFS1P1P0C7P4 283 aa14.71□□□□□ -0.05
LSM2-209ENST00000470083 FCER1AP12319 257 aa14.71□□□□□ -0.05
LSM2-209ENST00000470083 AKR1A1P14550 325 aa14.71□□□□□ -0.05
LSM2-209ENST00000470083 CSF2RAP15509 400 aa14.71□□□□□ -0.05
LSM2-209ENST00000470083 KCNQ1P51787 676 aa14.71□□□□□ -0.05
LSM2-209ENST00000470083 ABCB5Q2M3G0 1257 aa14.71□□□□□ -0.05
LSM2-209ENST00000470083 CERKLQ49MI3 558 aaPredicted RBP14.71□□□□□ -0.05
LSM2-209ENST00000470083 ZNF365Q70YC5 407 aa14.71□□□□□ -0.05
LSM2-209ENST00000470083 NCAPG2Q86XI2 1143 aa14.71□□□□□ -0.05
LSM2-209ENST00000470083 TMEM199Q8N511 208 aa14.71□□□□□ -0.05
LSM2-209ENST00000470083 HERVK_113Q902F9 699 aa14.71□□□□□ -0.05
LSM2-209ENST00000470083 TANGO6Q9C0B7 1094 aa14.71□□□□□ -0.05
LSM2-209ENST00000470083 NKX2-4Q9H2Z4 354 aa14.71□□□□□ -0.05
LSM2-209ENST00000470083 LENG1Q96BZ8 264 aaPredicted RBP14.7□□□□□ -0.06
LSM2-209ENST00000470083 TINF2Q9BSI4 451 aa14.7□□□□□ -0.06
LSM2-209ENST00000470083 MTIF3Q9H2K0 278 aaKnown RBP14.7□□□□□ -0.06
LSM2-209ENST00000470083 CABP5Q9NP86 173 aa14.7□□□□□ -0.06
LSM2-209ENST00000470083 YBX2Q9Y2T7 364 aaKnown RBP14.7□□□□□ -0.06
LSM2-209ENST00000470083 ZNF521Q96K83 1311 aa14.69□□□□□ -0.06
LSM2-209ENST00000470083 GPR37L1O60883 481 aa14.69□□□□□ -0.06
LSM2-209ENST00000470083 IGSF3O75054 1194 aa14.69□□□□□ -0.06
LSM2-209ENST00000470083 ZNF865P0CJ78 1059 aaPredicted RBP14.69□□□□□ -0.06
LSM2-209ENST00000470083 ACRP10323 421 aa14.69□□□□□ -0.06
LSM2-209ENST00000470083 TAL1P17542 331 aaPredicted RBP14.69□□□□□ -0.06
LSM2-209ENST00000470083 GUCY1A2P33402 732 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms