RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.61□□□□□ -1.03
PTCD3-208ENST00000469585 TIAF1O95411 115 aa8.61□□□□□ -1.03
PTCD3-208ENST00000469585 CRKP46108 304 aa8.61□□□□□ -1.03
PTCD3-208ENST00000469585 GJA8P48165 433 aa8.61□□□□□ -1.03
PTCD3-208ENST00000469585 CDK8P49336 464 aa8.61□□□□□ -1.03
PTCD3-208ENST00000469585 ZC3H6P61129 1189 aaKnown RBP8.61□□□□□ -1.03
PTCD3-208ENST00000469585 HNRNPUQ00839 825 aaKnown RBP eCLIP8.61□□□□□ -1.03
PTCD3-208ENST00000469585 INPP5AQ14642 412 aa8.61□□□□□ -1.03
PTCD3-208ENST00000469585 ZC3H12AQ5D1E8 599 aaKnown RBP8.61□□□□□ -1.03
PTCD3-208ENST00000469585 MEX3CQ5U5Q3 659 aaKnown RBP8.61□□□□□ -1.03
PTCD3-208ENST00000469585 WAPLQ7Z5K2 1190 aa8.61□□□□□ -1.03
PTCD3-208ENST00000469585 FBXO27Q8NI29 283 aa8.61□□□□□ -1.03
PTCD3-208ENST00000469585 WFDC12Q8WWY7 111 aa8.61□□□□□ -1.03
PTCD3-208ENST00000469585 C8orf37Q96NL8 207 aa8.61□□□□□ -1.03
PTCD3-208ENST00000469585 LRRC3Q9BY71 257 aa8.61□□□□□ -1.03
PTCD3-208ENST00000469585 CYP4F12Q9HCS2 524 aa8.61□□□□□ -1.03
PTCD3-208ENST00000469585 RAD18Q9NS91 495 aa8.61□□□□□ -1.03
PTCD3-208ENST00000469585 NPHP3Q7Z494 1330 aa8.6□□□□□ -1.03
PTCD3-208ENST00000469585 CENPJQ9HC77 1338 aaPredicted RBP8.6□□□□□ -1.03
PTCD3-208ENST00000469585 SLFN14P0C7P3 912 aa8.6□□□□□ -1.03
PTCD3-208ENST00000469585 HSPA1LP34931 641 aa8.6□□□□□ -1.03
PTCD3-208ENST00000469585 CHRNA4P43681 627 aa8.6□□□□□ -1.03
PTCD3-208ENST00000469585 RPL6Q02878 288 aaKnown RBP8.6□□□□□ -1.03
PTCD3-208ENST00000469585 UBP1Q9NZI7 540 aa8.6□□□□□ -1.03
PTCD3-208ENST00000469585 PPP1R9AQ9ULJ8 1098 aa8.6□□□□□ -1.03
PTCD3-208ENST00000469585 SETD1AO15047 1707 aaKnown RBP8.6□□□□□ -1.03
PTCD3-208ENST00000469585 ROBO1Q9Y6N7 1651 aa8.59□□□□□ -1.03
PTCD3-208ENST00000469585 EVC2Q86UK5 1308 aa8.59□□□□□ -1.03
PTCD3-208ENST00000469585 GFRA2O00451 464 aa8.59□□□□□ -1.03
PTCD3-208ENST00000469585 TMPRSS2O15393 492 aa8.59□□□□□ -1.03
PTCD3-208ENST00000469585 ADH5P11766 374 aa8.59□□□□□ -1.03
PTCD3-208ENST00000469585 IREB2P48200 963 aaKnown RBP8.59□□□□□ -1.03
PTCD3-208ENST00000469585 RASSF7Q02833 373 aa8.59□□□□□ -1.03
PTCD3-208ENST00000469585 SOX4Q06945 474 aaPredicted RBP8.59□□□□□ -1.03
PTCD3-208ENST00000469585 MPP2Q14168 576 aa8.59□□□□□ -1.03
PTCD3-208ENST00000469585 AKAP4Q5JQC9 854 aa8.59□□□□□ -1.03
PTCD3-208ENST00000469585 ANKRD34AQ69YU3 496 aa8.59□□□□□ -1.03
PTCD3-208ENST00000469585 LRFN4Q6PJG9 635 aa8.59□□□□□ -1.03
PTCD3-208ENST00000469585 CD163Q86VB7 1156 aa8.59□□□□□ -1.03
PTCD3-208ENST00000469585 RASGRP4Q8TDF6 673 aa8.59□□□□□ -1.03
PTCD3-208ENST00000469585 LRRC59Q96AG4 307 aaKnown RBP8.59□□□□□ -1.03
PTCD3-208ENST00000469585 PLPPR2Q96GM1 343 aa8.59□□□□□ -1.03
PTCD3-208ENST00000469585 CAPN10Q9HC96 672 aa8.59□□□□□ -1.03
PTCD3-208ENST00000469585 CRIM1Q9NZV1 1036 aa8.59□□□□□ -1.03
PTCD3-208ENST00000469585 SNCAIPQ9Y6H5 919 aa8.59□□□□□ -1.03
PTCD3-208ENST00000469585 CDC42BPGQ6DT37 1551 aa8.59□□□□□ -1.03
PTCD3-208ENST00000469585 GPRASP1Q5JY77 1395 aa8.59□□□□□ -1.03
PTCD3-208ENST00000469585 C1QTNF9BB2RNN3 333 aa8.58□□□□□ -1.04
PTCD3-208ENST00000469585 DRD2P14416 443 aa8.58□□□□□ -1.04
PTCD3-208ENST00000469585 ID3Q02535 119 aa8.58□□□□□ -1.04
PTCD3-208ENST00000469585 RING1Q06587 406 aa8.58□□□□□ -1.04
PTCD3-208ENST00000469585 NAALADL2Q58DX5 795 aa8.58□□□□□ -1.04
PTCD3-208ENST00000469585 BRINP3Q76B58 766 aa8.58□□□□□ -1.04
PTCD3-208ENST00000469585 TXNRD3Q86VQ6 643 aa8.58□□□□□ -1.04
PTCD3-208ENST00000469585 NGDNQ8NEJ9 315 aaKnown RBP8.58□□□□□ -1.04
PTCD3-208ENST00000469585 GPRASP2Q96D09 838 aa8.58□□□□□ -1.04
PTCD3-208ENST00000469585 HIRIP3Q9BW71 556 aaPredicted RBP8.58□□□□□ -1.04
PTCD3-208ENST00000469585 GSX1Q9H4S2 264 aaPredicted RBP8.58□□□□□ -1.04
PTCD3-208ENST00000469585 INPP5FQ9Y2H2 1132 aa8.58□□□□□ -1.04
PTCD3-208ENST00000469585 XIRP1Q702N8 1843 aaKnown RBP8.58□□□□□ -1.04
PTCD3-208ENST00000469585 JCADQ9P266 1359 aa8.58□□□□□ -1.04
PTCD3-208ENST00000469585 PHLPP1O60346 1717 aa8.57□□□□□ -1.04
PTCD3-208ENST00000469585 NALCNQ8IZF0 1738 aa8.57□□□□□ -1.04
PTCD3-208ENST00000469585 DCDC2CA8MYV0 355 aa8.57□□□□□ -1.04
PTCD3-208ENST00000469585 PREPP48147 710 aa8.57□□□□□ -1.04
PTCD3-208ENST00000469585 ERVK-24P63145 666 aa8.57□□□□□ -1.04
PTCD3-208ENST00000469585 APOBRQ0VD83 1088 aa8.57□□□□□ -1.04
PTCD3-208ENST00000469585 WIPI1Q5MNZ9 446 aaPredicted RBP8.57□□□□□ -1.04
PTCD3-208ENST00000469585 FDX2Q6P4F2 183 aa8.57□□□□□ -1.04
PTCD3-208ENST00000469585 CYFIP1Q7L576 1253 aa8.57□□□□□ -1.04
PTCD3-208ENST00000469585 REC114Q7Z4M0 266 aa8.57□□□□□ -1.04
PTCD3-208ENST00000469585 SLITRK4Q8IW52 837 aa8.57□□□□□ -1.04
PTCD3-208ENST00000469585 DZIP1LQ8IYY4 767 aaKnown RBP8.57□□□□□ -1.04
PTCD3-208ENST00000469585 C12orf50Q8NA57 414 aaPredicted RBP8.57□□□□□ -1.04
PTCD3-208ENST00000469585 UBL7Q96S82 380 aaPredicted RBP8.57□□□□□ -1.04
PTCD3-208ENST00000469585 CEP41Q9BYV8 373 aa8.57□□□□□ -1.04
PTCD3-208ENST00000469585 C1orf167Q5SNV9 1468 aa8.57□□□□□ -1.04
PTCD3-208ENST00000469585 MST1RQ04912 1400 aa8.56□□□□□ -1.04
PTCD3-208ENST00000469585 ANKARQ7Z5J8 1434 aa8.56□□□□□ -1.04
PTCD3-208ENST00000469585 ASXL1Q8IXJ9 1541 aa8.56□□□□□ -1.04
PTCD3-208ENST00000469585 TLR3O15455 904 aaKnown RBP8.56□□□□□ -1.04
PTCD3-208ENST00000469585 BPNT1O95861 308 aa8.56□□□□□ -1.04
PTCD3-208ENST00000469585 HDXQ7Z353 690 aa8.56□□□□□ -1.04
PTCD3-208ENST00000469585 C12orf40Q86WS4 652 aa8.56□□□□□ -1.04
PTCD3-208ENST00000469585 SLC43A3Q8NBI5 491 aa8.56□□□□□ -1.04
PTCD3-208ENST00000469585 C2CD4AQ8NCU7 369 aaPredicted RBP8.56□□□□□ -1.04
PTCD3-208ENST00000469585 FAM46AQ96IP4 442 aaKnown RBP8.56□□□□□ -1.04
PTCD3-208ENST00000469585 MEGF10Q96KG7 1140 aa8.56□□□□□ -1.04
PTCD3-208ENST00000469585 FANCD2OSQ96PS1 177 aa8.56□□□□□ -1.04
PTCD3-208ENST00000469585 DISC1Q9NRI5 854 aa8.56□□□□□ -1.04
PTCD3-208ENST00000469585 AP4E1Q9UPM8 1137 aa8.56□□□□□ -1.04
PTCD3-208ENST00000469585 ADGRB1O14514 1584 aa8.56□□□□□ -1.04
PTCD3-208ENST00000469585 KIF1AQ12756 1690 aa8.56□□□□□ -1.04
PTCD3-208ENST00000469585 SPATA31A6Q5VVP1 1343 aa8.55□□□□□ -1.04
PTCD3-208ENST00000469585 ITGB2P05107 769 aa8.55□□□□□ -1.04
PTCD3-208ENST00000469585 GLB1P16278 677 aa8.55□□□□□ -1.04
PTCD3-208ENST00000469585 NKD1Q969G9 470 aa8.55□□□□□ -1.04
PTCD3-208ENST00000469585 ELMO3Q96BJ8 720 aa8.55□□□□□ -1.04
PTCD3-208ENST00000469585 SSBP4Q9BWG4 385 aaPredicted RBP8.55□□□□□ -1.04
PTCD3-208ENST00000469585 HIF3AQ9Y2N7 669 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms