RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 ARMT1Q9H993 441 aa13.2□□□□□ -0.3
COL4A3-204ENST00000469504 ECHDC1Q9NTX5 307 aa13.2□□□□□ -0.3
COL4A3-204ENST00000469504 ARPP21Q9UBL0 812 aaPredicted RBP13.2□□□□□ -0.3
COL4A3-204ENST00000469504 DOCK3Q8IZD9 2030 aa13.2□□□□□ -0.3
COL4A3-204ENST00000469504 MSCO60682 206 aa13.19□□□□□ -0.3
COL4A3-204ENST00000469504 ZFYP08048 801 aaPredicted RBP13.19□□□□□ -0.3
COL4A3-204ENST00000469504 PTPREP23469 700 aa13.19□□□□□ -0.3
COL4A3-204ENST00000469504 GRB14Q14449 540 aa13.19□□□□□ -0.3
COL4A3-204ENST00000469504 MFSD14CQ5VZR4 134 aa13.19□□□□□ -0.3
COL4A3-204ENST00000469504 GIMAP6Q6P9H5 292 aa13.19□□□□□ -0.3
COL4A3-204ENST00000469504 C16orf86Q6ZW13 317 aa13.19□□□□□ -0.3
COL4A3-204ENST00000469504 SHCBP1Q8NEM2 672 aa13.19□□□□□ -0.3
COL4A3-204ENST00000469504 DCTPP1Q9H773 170 aa13.19□□□□□ -0.3
COL4A3-204ENST00000469504 TMX2Q9Y320 296 aa13.19□□□□□ -0.3
COL4A3-204ENST00000469504 WDR46O15213 610 aaKnown RBP13.18□□□□□ -0.3
COL4A3-204ENST00000469504 CDK8P49336 464 aa13.18□□□□□ -0.3
COL4A3-204ENST00000469504 ICA1Q05084 483 aa13.18□□□□□ -0.3
COL4A3-204ENST00000469504 CACNB2Q08289 660 aaPredicted RBP13.18□□□□□ -0.3
COL4A3-204ENST00000469504 POTEEQ6S8J3 1075 aa13.18□□□□□ -0.3
COL4A3-204ENST00000469504 PRO3102Q9H379 93 aa13.18□□□□□ -0.3
COL4A3-204ENST00000469504 C11orf49Q9H6J7 331 aa13.18□□□□□ -0.3
COL4A3-204ENST00000469504 VCPKMTQ9H867 229 aa13.18□□□□□ -0.3
COL4A3-204ENST00000469504 KANSL2Q9H9L4 492 aa13.18□□□□□ -0.3
COL4A3-204ENST00000469504 SLC5A4Q9NY91 659 aa13.18□□□□□ -0.3
COL4A3-204ENST00000469504 SLC4A4Q9Y6R1 1079 aa13.18□□□□□ -0.3
COL4A3-204ENST00000469504 PLXNB2O15031 1838 aa13.18□□□□□ -0.3
COL4A3-204ENST00000469504 A0A1W2PRG0 241 aa13.17□□□□□ -0.3
COL4A3-204ENST00000469504 USP17L12C9JPN9 530 aa13.17□□□□□ -0.3
COL4A3-204ENST00000469504 USP17L21D6R901 530 aa13.17□□□□□ -0.3
COL4A3-204ENST00000469504 TRIM32Q13049 653 aa13.17□□□□□ -0.3
COL4A3-204ENST00000469504 SBK1Q52WX2 424 aa13.17□□□□□ -0.3
COL4A3-204ENST00000469504 C20orf194Q5TEA3 1177 aa13.17□□□□□ -0.3
COL4A3-204ENST00000469504 WDR78Q5VTH9 848 aa13.17□□□□□ -0.3
COL4A3-204ENST00000469504 ABRAQ8N0Z2 381 aa13.17□□□□□ -0.3
COL4A3-204ENST00000469504 KBTBD3Q8NAB2 608 aa13.17□□□□□ -0.3
COL4A3-204ENST00000469504 TANGO6Q9C0B7 1094 aa13.17□□□□□ -0.3
COL4A3-204ENST00000469504 SPATC1LQ9H0A9 340 aa13.17□□□□□ -0.3
COL4A3-204ENST00000469504 MROH8Q9H579 483 aa13.17□□□□□ -0.3
COL4A3-204ENST00000469504 ZNF287Q9HBT7 754 aa13.17□□□□□ -0.3
COL4A3-204ENST00000469504 BTBD7Q9P203 1132 aa13.17□□□□□ -0.3
COL4A3-204ENST00000469504 RBM27Q9P2N5 1060 aaKnown RBP13.17□□□□□ -0.3
COL4A3-204ENST00000469504 RANBP2P49792 3224 aaKnown RBP13.16□□□□□ -0.3
COL4A3-204ENST00000469504 PRKAB2O43741 272 aa13.16□□□□□ -0.3
COL4A3-204ENST00000469504 PEX10O60683 326 aa13.16□□□□□ -0.3
COL4A3-204ENST00000469504 CYP2D6P10635 497 aa13.16□□□□□ -0.3
COL4A3-204ENST00000469504 AKR1B1P15121 316 aa13.16□□□□□ -0.3
COL4A3-204ENST00000469504 GNAT2P19087 354 aa13.16□□□□□ -0.3
COL4A3-204ENST00000469504 OLFML2BQ68BL8 750 aa13.16□□□□□ -0.3
COL4A3-204ENST00000469504 SLC44A5Q8NCS7 719 aa13.16□□□□□ -0.3
COL4A3-204ENST00000469504 APPBP2Q92624 585 aa13.16□□□□□ -0.3
COL4A3-204ENST00000469504 PUS7LQ9H0K6 701 aaKnown RBP13.16□□□□□ -0.3
COL4A3-204ENST00000469504 BCL11AQ9H165 835 aa13.16□□□□□ -0.3
COL4A3-204ENST00000469504 TTC41PQ6P2S7 1318 aa13.15□□□□□ -0.3
COL4A3-204ENST00000469504 TRIOBPQ9H2D6 2365 aa13.15□□□□□ -0.3
COL4A3-204ENST00000469504 ERC2O15083 957 aa13.15□□□□□ -0.3
COL4A3-204ENST00000469504 FLOT1O75955 427 aa13.15□□□□□ -0.3
COL4A3-204ENST00000469504 SLC25A27O95847 323 aa13.15□□□□□ -0.3
COL4A3-204ENST00000469504 BMP8BP34820 402 aa13.15□□□□□ -0.3
COL4A3-204ENST00000469504 COPB2P35606 906 aa13.15□□□□□ -0.3
COL4A3-204ENST00000469504 MNX1P50219 401 aaPredicted RBP13.15□□□□□ -0.3
COL4A3-204ENST00000469504 ATP2B2Q01814 1243 aa13.15□□□□□ -0.3
COL4A3-204ENST00000469504 CCL14Q16627 93 aa13.15□□□□□ -0.3
COL4A3-204ENST00000469504 LHX8Q68G74 356 aa13.15□□□□□ -0.3
COL4A3-204ENST00000469504 CTR9Q6PD62 1173 aa13.15□□□□□ -0.3
COL4A3-204ENST00000469504 DIS3LQ8TF46 1054 aaKnown RBP13.15□□□□□ -0.3
COL4A3-204ENST00000469504 DYNLL2Q96FJ2 89 aa13.15□□□□□ -0.3
COL4A3-204ENST00000469504 STRBPQ96SI9 672 aaKnown RBP13.15□□□□□ -0.3
COL4A3-204ENST00000469504 MOV10L1Q9BXT6 1211 aaKnown RBP13.15□□□□□ -0.3
COL4A3-204ENST00000469504 GOPCQ9HD26 462 aa13.15□□□□□ -0.3
COL4A3-204ENST00000469504 ROBO3Q96MS0 1386 aa13.15□□□□□ -0.3
COL4A3-204ENST00000469504 ZNF236Q9UL36 1845 aa13.14□□□□□ -0.31
COL4A3-204ENST00000469504 RNF113AO15541 343 aaKnown RBP13.14□□□□□ -0.31
COL4A3-204ENST00000469504 SMARCA5O60264 1052 aaPredicted RBP13.14□□□□□ -0.31
COL4A3-204ENST00000469504 COL6A1P12109 1028 aa13.14□□□□□ -0.31
COL4A3-204ENST00000469504 CCND3P30281 292 aaPredicted RBP13.14□□□□□ -0.31
COL4A3-204ENST00000469504 EVX2Q03828 476 aa13.14□□□□□ -0.31
COL4A3-204ENST00000469504 DPP9Q86TI2 863 aa13.14□□□□□ -0.31
COL4A3-204ENST00000469504 SIAH1Q8IUQ4 282 aa13.14□□□□□ -0.31
COL4A3-204ENST00000469504 DDX20Q9UHI6 824 aaKnown RBP13.14□□□□□ -0.31
COL4A3-204ENST00000469504 SYNPO2Q9UMS6 1093 aa13.14□□□□□ -0.31
COL4A3-204ENST00000469504 IGHA2P01877 340 aa13.13□□□□□ -0.31
COL4A3-204ENST00000469504 EEF2P13639 858 aaKnown RBP13.13□□□□□ -0.31
COL4A3-204ENST00000469504 ERCC3P19447 782 aa13.13□□□□□ -0.31
COL4A3-204ENST00000469504 ADORA2AP29274 412 aa13.13□□□□□ -0.31
COL4A3-204ENST00000469504 MKNK2Q9HBH9 465 aa13.13□□□□□ -0.31
COL4A3-204ENST00000469504 NRBP1Q9UHY1 535 aa13.13□□□□□ -0.31
COL4A3-204ENST00000469504 ADAMTS5Q9UNA0 930 aa13.13□□□□□ -0.31
COL4A3-204ENST00000469504 A0A0G2JMZ2 1700 aa13.13□□□□□ -0.31
COL4A3-204ENST00000469504 GSG1L2A8MUP6 293 aa13.12□□□□□ -0.31
COL4A3-204ENST00000469504 FCER1AP12319 257 aa13.12□□□□□ -0.31
COL4A3-204ENST00000469504 SLFNL1Q499Z3 407 aa13.12□□□□□ -0.31
COL4A3-204ENST00000469504 GDF15Q99988 308 aa13.12□□□□□ -0.31
COL4A3-204ENST00000469504 NACAP1Q9BZK3 213 aa13.12□□□□□ -0.31
COL4A3-204ENST00000469504 FLRT1Q9NZU1 646 aa13.12□□□□□ -0.31
COL4A3-204ENST00000469504 NYAP2Q9P242 653 aa13.12□□□□□ -0.31
COL4A3-204ENST00000469504 PFASO15067 1338 aa13.12□□□□□ -0.31
COL4A3-204ENST00000469504 MYH7P12883 1935 aa13.11□□□□□ -0.31
COL4A3-204ENST00000469504 CYP2D7A0A087X1C5 515 aa13.11□□□□□ -0.31
COL4A3-204ENST00000469504 DNM1LO00429 736 aa13.11□□□□□ -0.31
COL4A3-204ENST00000469504 GPAA1O43292 621 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms