RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 COG2Q14746 738 aa15.63■□□□□ 0.09
TRAPPC12-216ENST00000469400 SH3RF1Q7Z6J0 888 aa15.63■□□□□ 0.09
TRAPPC12-216ENST00000469400 MAGEB6Q8N7X4 407 aa15.63■□□□□ 0.09
TRAPPC12-216ENST00000469400 CLUAP1Q96AJ1 413 aa15.63■□□□□ 0.09
TRAPPC12-216ENST00000469400 TRIM43Q96BQ3 446 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC12-216ENST00000469400 SPATC1LQ9H0A9 340 aa15.63■□□□□ 0.09
TRAPPC12-216ENST00000469400 HOXC10Q9NYD6 342 aa15.63■□□□□ 0.09
TRAPPC12-216ENST00000469400 TLR7Q9NYK1 1049 aaKnown RBP15.63■□□□□ 0.09
TRAPPC12-216ENST00000469400 SURF6O75683 361 aaKnown RBP15.62■□□□□ 0.09
TRAPPC12-216ENST00000469400 ERCC3P19447 782 aa15.62■□□□□ 0.09
TRAPPC12-216ENST00000469400 SEPT2Q15019 361 aa15.62■□□□□ 0.09
TRAPPC12-216ENST00000469400 LRRC41Q15345 812 aa15.62■□□□□ 0.09
TRAPPC12-216ENST00000469400 PRAMEF19Q5SWL8 479 aa15.62■□□□□ 0.09
TRAPPC12-216ENST00000469400 C1orf53Q5VUE5 145 aa15.62■□□□□ 0.09
TRAPPC12-216ENST00000469400 SHCBP1Q8NEM2 672 aa15.62■□□□□ 0.09
TRAPPC12-216ENST00000469400 SSH3Q8TE77 659 aa15.62■□□□□ 0.09
TRAPPC12-216ENST00000469400 FRAT1Q92837 279 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC12-216ENST00000469400 FERMT2Q96AC1 680 aa15.62■□□□□ 0.09
TRAPPC12-216ENST00000469400 CCDC8Q9H0W5 538 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC12-216ENST00000469400 PRDM6Q9NQX0 595 aa15.62■□□□□ 0.09
TRAPPC12-216ENST00000469400 PRUNE2Q8WUY3 3088 aa15.62■□□□□ 0.09
TRAPPC12-216ENST00000469400 RLFQ13129 1914 aa15.62■□□□□ 0.09
TRAPPC12-216ENST00000469400 MYO5AQ9Y4I1 1855 aaKnown RBP15.61■□□□□ 0.09
TRAPPC12-216ENST00000469400 A0A1W2PRG0 241 aa15.61■□□□□ 0.09
TRAPPC12-216ENST00000469400 BCAR3O75815 825 aa15.61■□□□□ 0.09
TRAPPC12-216ENST00000469400 FOSL2P15408 326 aa15.61■□□□□ 0.09
TRAPPC12-216ENST00000469400 ATP8B2P98198 1209 aa15.61■□□□□ 0.09
TRAPPC12-216ENST00000469400 TANGO6Q9C0B7 1094 aa15.61■□□□□ 0.09
TRAPPC12-216ENST00000469400 ANTXR1Q9H6X2 564 aa15.61■□□□□ 0.09
TRAPPC12-216ENST00000469400 SLC5A4Q9NY91 659 aa15.61■□□□□ 0.09
TRAPPC12-216ENST00000469400 MYH1P12882 1939 aa15.6■□□□□ 0.09
TRAPPC12-216ENST00000469400 POLR3DP05423 398 aaPredicted RBP15.6■□□□□ 0.09
TRAPPC12-216ENST00000469400 ITGB8P26012 769 aa15.6■□□□□ 0.09
TRAPPC12-216ENST00000469400 TLE2Q04725 743 aa15.6■□□□□ 0.09
TRAPPC12-216ENST00000469400 GABPAQ06546 454 aa15.6■□□□□ 0.09
TRAPPC12-216ENST00000469400 FAM47AQ5JRC9 791 aa15.6■□□□□ 0.09
TRAPPC12-216ENST00000469400 EAF2Q96CJ1 260 aaPredicted RBP15.6■□□□□ 0.09
TRAPPC12-216ENST00000469400 MPHOSPH10O00566 681 aaKnown RBP15.59■□□□□ 0.09
TRAPPC12-216ENST00000469400 MAP3K12Q12852 859 aa15.59■□□□□ 0.09
TRAPPC12-216ENST00000469400 KIAA1755Q5JYT7 1200 aa15.59■□□□□ 0.09
TRAPPC12-216ENST00000469400 NCAPG2Q86XI2 1143 aa15.59■□□□□ 0.09
TRAPPC12-216ENST00000469400 ABRAQ8N0Z2 381 aa15.59■□□□□ 0.09
TRAPPC12-216ENST00000469400 TMEM57Q8N5G2 664 aa15.59■□□□□ 0.09
TRAPPC12-216ENST00000469400 MB21D1Q8N884 522 aa15.59■□□□□ 0.09
TRAPPC12-216ENST00000469400 RIOK1Q9BRS2 568 aaKnown RBP15.59■□□□□ 0.09
TRAPPC12-216ENST00000469400 MROH8Q9H579 483 aa15.59■□□□□ 0.09
TRAPPC12-216ENST00000469400 NOP58Q9Y2X3 529 aaKnown RBP15.59■□□□□ 0.09
TRAPPC12-216ENST00000469400 TACC3Q9Y6A5 838 aa15.59■□□□□ 0.09
TRAPPC12-216ENST00000469400 DSG3P32926 999 aa15.58■□□□□ 0.08
TRAPPC12-216ENST00000469400 EPHB4P54760 987 aa15.58■□□□□ 0.08
TRAPPC12-216ENST00000469400 EVX2Q03828 476 aa15.58■□□□□ 0.08
TRAPPC12-216ENST00000469400 PLS1Q14651 629 aa15.58■□□□□ 0.08
TRAPPC12-216ENST00000469400 TMED8Q6PL24 325 aaPredicted RBP15.58■□□□□ 0.08
TRAPPC12-216ENST00000469400 SYMPKQ92797 1274 aaKnown RBP15.58■□□□□ 0.08
TRAPPC12-216ENST00000469400 MAML3Q96JK9 1138 aa15.58■□□□□ 0.08
TRAPPC12-216ENST00000469400 RNPC3Q96LT9 517 aaKnown RBP15.58■□□□□ 0.08
TRAPPC12-216ENST00000469400 C1orf115Q9H7X2 142 aa15.58■□□□□ 0.08
TRAPPC12-216ENST00000469400 PHF24Q9UPV7 400 aa15.58■□□□□ 0.08
TRAPPC12-216ENST00000469400 ZNF236Q9UL36 1845 aa15.58■□□□□ 0.08
TRAPPC12-216ENST00000469400 TMEM265A0A087WTH1 108 aa15.57■□□□□ 0.08
TRAPPC12-216ENST00000469400 MAGEB6P1A0A0J9YX57 407 aa15.57■□□□□ 0.08
TRAPPC12-216ENST00000469400 CLTBP09497 229 aa15.57■□□□□ 0.08
TRAPPC12-216ENST00000469400 ATG4CQ96DT6 458 aa15.57■□□□□ 0.08
TRAPPC12-216ENST00000469400 XPNPEP3Q9NQH7 507 aa15.57■□□□□ 0.08
TRAPPC12-216ENST00000469400 MCM9Q9NXL9 1143 aa15.57■□□□□ 0.08
TRAPPC12-216ENST00000469400 FLOT1O75955 427 aa15.56■□□□□ 0.08
TRAPPC12-216ENST00000469400 RARBP10826 455 aa15.56■□□□□ 0.08
TRAPPC12-216ENST00000469400 FCER1AP12319 257 aa15.56■□□□□ 0.08
TRAPPC12-216ENST00000469400 NRBP1Q9UHY1 535 aa15.56■□□□□ 0.08
TRAPPC12-216ENST00000469400 KIAA0355O15063 1070 aa15.55■□□□□ 0.08
TRAPPC12-216ENST00000469400 PQBP1O60828 265 aaKnown RBP15.55■□□□□ 0.08
TRAPPC12-216ENST00000469400 PGK1P00558 417 aa15.55■□□□□ 0.08
TRAPPC12-216ENST00000469400 RAG1P15918 1043 aa15.55■□□□□ 0.08
TRAPPC12-216ENST00000469400 GRIN2CQ14957 1233 aa15.55■□□□□ 0.08
TRAPPC12-216ENST00000469400 TMEM179Q6ZVK1 233 aa15.55■□□□□ 0.08
TRAPPC12-216ENST00000469400 RNF180Q86T96 592 aa15.55■□□□□ 0.08
TRAPPC12-216ENST00000469400 SIAH1Q8IUQ4 282 aa15.55■□□□□ 0.08
TRAPPC12-216ENST00000469400 SPICE1Q8N0Z3 855 aa15.55■□□□□ 0.08
TRAPPC12-216ENST00000469400 SLC44A5Q8NCS7 719 aa15.55■□□□□ 0.08
TRAPPC12-216ENST00000469400 CRNKL1Q9BZJ0 848 aaKnown RBP15.55■□□□□ 0.08
TRAPPC12-216ENST00000469400 PGK2P07205 417 aa15.54■□□□□ 0.08
TRAPPC12-216ENST00000469400 CYP2D6P10635 497 aa15.54■□□□□ 0.08
TRAPPC12-216ENST00000469400 FPGSQ05932 587 aa15.54■□□□□ 0.08
TRAPPC12-216ENST00000469400 TMEM132BQ14DG7 1078 aa15.54■□□□□ 0.08
TRAPPC12-216ENST00000469400 ZKSCAN2Q63HK3 967 aa15.54■□□□□ 0.08
TRAPPC12-216ENST00000469400 SAMD1Q6SPF0 538 aaPredicted RBP15.54■□□□□ 0.08
TRAPPC12-216ENST00000469400 USP38Q8NB14 1042 aa15.54■□□□□ 0.08
TRAPPC12-216ENST00000469400 TMEM39AQ9NV64 488 aa15.54■□□□□ 0.08
TRAPPC12-216ENST00000469400 TMX2Q9Y320 296 aa15.54■□□□□ 0.08
TRAPPC12-216ENST00000469400 A0A0G2JMZ2 1700 aa15.54■□□□□ 0.08
TRAPPC12-216ENST00000469400 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.53■□□□□ 0.08
TRAPPC12-216ENST00000469400 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.53■□□□□ 0.08
TRAPPC12-216ENST00000469400 A0A1W2PQ45 241 aaPredicted RBP15.53■□□□□ 0.08
TRAPPC12-216ENST00000469400 A0A1W2PQY0 241 aa15.53■□□□□ 0.08
TRAPPC12-216ENST00000469400 SLC25A27O95847 323 aa15.53■□□□□ 0.08
TRAPPC12-216ENST00000469400 PDE6AP16499 860 aa15.53■□□□□ 0.08
TRAPPC12-216ENST00000469400 TAL1P17542 331 aaPredicted RBP15.53■□□□□ 0.08
TRAPPC12-216ENST00000469400 DNAJB2P25686 324 aa15.53■□□□□ 0.08
TRAPPC12-216ENST00000469400 TJAP1Q5JTD0 557 aa15.53■□□□□ 0.08
TRAPPC12-216ENST00000469400 SLC9C2Q5TAH2 1124 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms