RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 PARP1P09874 1014 aaKnown RBP10.76□□□□□ -0.69
SMC1A-205ENST00000469129 KCNA3P22001 575 aa10.76□□□□□ -0.69
SMC1A-205ENST00000469129 YY1P25490 414 aa10.76□□□□□ -0.69
SMC1A-205ENST00000469129 SMARCA1P28370 1054 aa10.76□□□□□ -0.69
SMC1A-205ENST00000469129 NOVP48745 357 aa10.76□□□□□ -0.69
SMC1A-205ENST00000469129 FAM160A1Q05DH4 1040 aa10.76□□□□□ -0.69
SMC1A-205ENST00000469129 PFKFB3Q16875 520 aaPredicted RBP10.76□□□□□ -0.69
SMC1A-205ENST00000469129 CFAP100Q494V2 611 aa10.76□□□□□ -0.69
SMC1A-205ENST00000469129 ADALQ6DHV7 355 aa10.76□□□□□ -0.69
SMC1A-205ENST00000469129 GAS2L3Q86XJ1 694 aa10.76□□□□□ -0.69
SMC1A-205ENST00000469129 CCDC82Q8N4S0 544 aa10.76□□□□□ -0.69
SMC1A-205ENST00000469129 ZNF713Q8N859 430 aaPredicted RBP10.76□□□□□ -0.69
SMC1A-205ENST00000469129 AGBL3Q8NEM8 1001 aa10.76□□□□□ -0.69
SMC1A-205ENST00000469129 CCDC12Q8WUD4 166 aaPredicted RBP10.76□□□□□ -0.69
SMC1A-205ENST00000469129 PGBD1Q96JS3 809 aa10.76□□□□□ -0.69
SMC1A-205ENST00000469129 PHF20Q9BVI0 1012 aa10.76□□□□□ -0.69
SMC1A-205ENST00000469129 SPZ1Q9BXG8 430 aa10.76□□□□□ -0.69
SMC1A-205ENST00000469129 TAOK3Q9H2K8 898 aa10.76□□□□□ -0.69
SMC1A-205ENST00000469129 MORC2Q9Y6X9 1032 aaPredicted RBP10.76□□□□□ -0.69
SMC1A-205ENST00000469129 GRIN3BO60391 1043 aa10.75□□□□□ -0.69
SMC1A-205ENST00000469129 TTLL1O95922 423 aa10.75□□□□□ -0.69
SMC1A-205ENST00000469129 VIL1P09327 827 aaKnown RBP10.75□□□□□ -0.69
SMC1A-205ENST00000469129 CCDC192P0DO97 292 aa10.75□□□□□ -0.69
SMC1A-205ENST00000469129 XRCC6P12956 609 aaKnown RBP eCLIP10.75□□□□□ -0.69
SMC1A-205ENST00000469129 LIG1P18858 919 aa10.75□□□□□ -0.69
SMC1A-205ENST00000469129 GUCY1A2P33402 732 aa10.75□□□□□ -0.69
SMC1A-205ENST00000469129 SLC39A14Q15043 492 aa10.75□□□□□ -0.69
SMC1A-205ENST00000469129 PKN1Q16512 942 aa10.75□□□□□ -0.69
SMC1A-205ENST00000469129 TPRNQ4KMQ1 711 aa10.75□□□□□ -0.69
SMC1A-205ENST00000469129 ASPRV1Q53RT3 343 aa10.75□□□□□ -0.69
SMC1A-205ENST00000469129 GALNT17Q6IS24 598 aa10.75□□□□□ -0.69
SMC1A-205ENST00000469129 CCAR1Q8IX12 1150 aaKnown RBP10.75□□□□□ -0.69
SMC1A-205ENST00000469129 CMTR1Q8N1G2 835 aaKnown RBP10.75□□□□□ -0.69
SMC1A-205ENST00000469129 OGFOD1Q8N543 542 aa10.75□□□□□ -0.69
SMC1A-205ENST00000469129 SRBD1Q8N5C6 995 aaKnown RBP10.75□□□□□ -0.69
SMC1A-205ENST00000469129 FSIP1Q8NA03 581 aa10.75□□□□□ -0.69
SMC1A-205ENST00000469129 CEP95Q96GE4 821 aa10.75□□□□□ -0.69
SMC1A-205ENST00000469129 FTOQ9C0B1 505 aaKnown RBP eCLIP10.75□□□□□ -0.69
SMC1A-205ENST00000469129 KCNQ5Q9NR82 932 aa10.75□□□□□ -0.69
SMC1A-205ENST00000469129 GJB4Q9NTQ9 266 aa10.75□□□□□ -0.69
SMC1A-205ENST00000469129 DACT1Q9NYF0 836 aa10.75□□□□□ -0.69
SMC1A-205ENST00000469129 PI4KBQ9UBF8 816 aa10.75□□□□□ -0.69
SMC1A-205ENST00000469129 MAD2L2Q9UI95 211 aa10.75□□□□□ -0.69
SMC1A-205ENST00000469129 ZNRF3Q9ULT6 936 aa10.75□□□□□ -0.69
SMC1A-205ENST00000469129 V9GY48 417 aaPredicted RBP10.75□□□□□ -0.69
SMC1A-205ENST00000469129 LTBP3Q9NS15 1303 aa10.75□□□□□ -0.69
SMC1A-205ENST00000469129 IGKV6D-41A0A0C4DH26 115 aa10.74□□□□□ -0.69
SMC1A-205ENST00000469129 PALM3A6NDB9 673 aaPredicted RBP10.74□□□□□ -0.69
SMC1A-205ENST00000469129 CUTAO60888 179 aa10.74□□□□□ -0.69
SMC1A-205ENST00000469129 SHMT1P34896 483 aa10.74□□□□□ -0.69
SMC1A-205ENST00000469129 NFIAQ12857 509 aa10.74□□□□□ -0.69
SMC1A-205ENST00000469129 RBM43Q6ZSC3 357 aaKnown RBP10.74□□□□□ -0.69
SMC1A-205ENST00000469129 FOXP4Q8IVH2 680 aaPredicted RBP10.74□□□□□ -0.69
SMC1A-205ENST00000469129 ZSCAN29Q8IWY8 852 aaPredicted RBP10.74□□□□□ -0.69
SMC1A-205ENST00000469129 JDP2Q8WYK2 163 aa10.74□□□□□ -0.69
SMC1A-205ENST00000469129 ZNF277Q9NRM2 450 aaPredicted RBP10.74□□□□□ -0.69
SMC1A-205ENST00000469129 MTMR4Q9NYA4 1195 aa10.74□□□□□ -0.69
SMC1A-205ENST00000469129 VPS54Q9P1Q0 977 aa10.74□□□□□ -0.69
SMC1A-205ENST00000469129 SEC63Q9UGP8 760 aaKnown RBP10.74□□□□□ -0.69
SMC1A-205ENST00000469129 PCDHA7Q9UN72 937 aa10.74□□□□□ -0.69
SMC1A-205ENST00000469129 KCNJ14Q9UNX9 436 aa10.74□□□□□ -0.69
SMC1A-205ENST00000469129 CLIC4Q9Y696 253 aa10.74□□□□□ -0.69
SMC1A-205ENST00000469129 RBBP6Q7Z6E9 1792 aaKnown RBP10.74□□□□□ -0.69
SMC1A-205ENST00000469129 SBF1O95248 1867 aa10.73□□□□□ -0.69
SMC1A-205ENST00000469129 DOCK1Q14185 1865 aa10.73□□□□□ -0.69
SMC1A-205ENST00000469129 SPDYE2BA6NHP3 402 aa10.73□□□□□ -0.69
SMC1A-205ENST00000469129 BTBD18B2RXH4 712 aa10.73□□□□□ -0.69
SMC1A-205ENST00000469129 PSMD14O00487 310 aa10.73□□□□□ -0.69
SMC1A-205ENST00000469129 MYO1BO43795 1136 aa10.73□□□□□ -0.69
SMC1A-205ENST00000469129 CAVIN2O95810 425 aa10.73□□□□□ -0.69
SMC1A-205ENST00000469129 SPDYE6P0CI01 402 aa10.73□□□□□ -0.69
SMC1A-205ENST00000469129 AKR1B1P15121 316 aa10.73□□□□□ -0.69
SMC1A-205ENST00000469129 TRAPPC10P48553 1259 aa10.73□□□□□ -0.69
SMC1A-205ENST00000469129 NLRP5P59047 1200 aa10.73□□□□□ -0.69
SMC1A-205ENST00000469129 CCDC173Q0VFZ6 552 aa10.73□□□□□ -0.69
SMC1A-205ENST00000469129 DLGAP5Q15398 846 aa10.73□□□□□ -0.69
SMC1A-205ENST00000469129 UVSSAQ2YD98 709 aa10.73□□□□□ -0.69
SMC1A-205ENST00000469129 FKBP1CQ5VVH2 108 aa10.73□□□□□ -0.69
SMC1A-205ENST00000469129 MTMR14Q8NCE2 650 aa10.73□□□□□ -0.69
SMC1A-205ENST00000469129 DAGLBQ8NCG7 672 aa10.73□□□□□ -0.69
SMC1A-205ENST00000469129 RRP36Q96EU6 259 aaKnown RBP10.73□□□□□ -0.69
SMC1A-205ENST00000469129 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.73□□□□□ -0.69
SMC1A-205ENST00000469129 FAM198AQ9UFP1 575 aa10.73□□□□□ -0.69
SMC1A-205ENST00000469129 TRIM75PA6NK02 468 aa10.72□□□□□ -0.69
SMC1A-205ENST00000469129 KLRF2D3W0D1 207 aa10.72□□□□□ -0.69
SMC1A-205ENST00000469129 UBE2Q2LH0YL09 131 aa10.72□□□□□ -0.69
SMC1A-205ENST00000469129 MPHOSPH10O00566 681 aaKnown RBP10.72□□□□□ -0.69
SMC1A-205ENST00000469129 NR1I2O75469 434 aa10.72□□□□□ -0.69
SMC1A-205ENST00000469129 CMA1P23946 247 aa10.72□□□□□ -0.69
SMC1A-205ENST00000469129 RPS12P25398 132 aaKnown RBP10.72□□□□□ -0.69
SMC1A-205ENST00000469129 TNIP1Q15025 636 aa10.72□□□□□ -0.69
SMC1A-205ENST00000469129 PTPAQ15257 358 aa10.72□□□□□ -0.69
SMC1A-205ENST00000469129 GPATCH4Q5T3I0 446 aaKnown RBP10.72□□□□□ -0.69
SMC1A-205ENST00000469129 CIAPIN1Q6FI81 312 aa10.72□□□□□ -0.69
SMC1A-205ENST00000469129 SASS6Q6UVJ0 657 aa10.72□□□□□ -0.69
SMC1A-205ENST00000469129 TMEM179Q6ZVK1 233 aa10.72□□□□□ -0.69
SMC1A-205ENST00000469129 KRI1Q8N9T8 703 aaKnown RBP10.72□□□□□ -0.69
SMC1A-205ENST00000469129 GMLQ99445 158 aa10.72□□□□□ -0.69
SMC1A-205ENST00000469129 RBSNQ9H1K0 784 aa10.72□□□□□ -0.69
SMC1A-205ENST00000469129 TDRD3Q9H7E2 651 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms