RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 AKNAD1Q5T1N1 836 aa17.52■□□□□ 0.4
TMEM39A-205ENST00000468676 CATSPERGQ6ZRH7 1159 aa17.52■□□□□ 0.4
TMEM39A-205ENST00000468676 MFSD6Q6ZSS7 791 aa17.52■□□□□ 0.4
TMEM39A-205ENST00000468676 STAG1Q8WVM7 1258 aa17.52■□□□□ 0.4
TMEM39A-205ENST00000468676 MTMR4Q9NYA4 1195 aa17.52■□□□□ 0.4
TMEM39A-205ENST00000468676 RANBP6O60518 1105 aaKnown RBP17.51■□□□□ 0.39
TMEM39A-205ENST00000468676 HAND2P61296 217 aa17.51■□□□□ 0.39
TMEM39A-205ENST00000468676 FAM47AQ5JRC9 791 aa17.51■□□□□ 0.39
TMEM39A-205ENST00000468676 CASC1Q6TDU7 716 aa17.51■□□□□ 0.39
TMEM39A-205ENST00000468676 OTOP1Q7RTM1 612 aa17.51■□□□□ 0.39
TMEM39A-205ENST00000468676 CLEC10AQ8IUN9 316 aa17.51■□□□□ 0.39
TMEM39A-205ENST00000468676 MKL1Q969V6 931 aa17.51■□□□□ 0.39
TMEM39A-205ENST00000468676 CEP95Q96GE4 821 aa17.51■□□□□ 0.39
TMEM39A-205ENST00000468676 P2RX7Q99572 595 aaKnown RBP17.51■□□□□ 0.39
TMEM39A-205ENST00000468676 RPAP3Q9H6T3 665 aaPredicted RBP17.51■□□□□ 0.39
TMEM39A-205ENST00000468676 TOMM22Q9NS69 142 aa17.51■□□□□ 0.39
TMEM39A-205ENST00000468676 HOXC10Q9NYD6 342 aa17.51■□□□□ 0.39
TMEM39A-205ENST00000468676 CLIP2Q9UDT6 1046 aa17.51■□□□□ 0.39
TMEM39A-205ENST00000468676 TRIM17Q9Y577 477 aa17.51■□□□□ 0.39
TMEM39A-205ENST00000468676 LAMA4Q16363 1823 aa17.5■□□□□ 0.39
TMEM39A-205ENST00000468676 WDR46O15213 610 aaKnown RBP17.5■□□□□ 0.39
TMEM39A-205ENST00000468676 HOXD10P28358 340 aa17.5■□□□□ 0.39
TMEM39A-205ENST00000468676 PRMT2P55345 433 aa17.5■□□□□ 0.39
TMEM39A-205ENST00000468676 FBXO46Q6PJ61 603 aaPredicted RBP17.5■□□□□ 0.39
TMEM39A-205ENST00000468676 KIAA1211Q6ZU35 1233 aa17.5■□□□□ 0.39
TMEM39A-205ENST00000468676 SKAP1Q86WV1 359 aa17.5■□□□□ 0.39
TMEM39A-205ENST00000468676 ANKRD13CQ8N6S4 541 aa17.5■□□□□ 0.39
TMEM39A-205ENST00000468676 IL25Q9H293 177 aa17.5■□□□□ 0.39
TMEM39A-205ENST00000468676 MORF4L1Q9UBU8 362 aa17.5■□□□□ 0.39
TMEM39A-205ENST00000468676 U3KPZ7 1027 aaPredicted RBP17.5■□□□□ 0.39
TMEM39A-205ENST00000468676 MYH4Q9Y623 1939 aa17.5■□□□□ 0.39
TMEM39A-205ENST00000468676 PSMC4P43686 418 aa17.49■□□□□ 0.39
TMEM39A-205ENST00000468676 FCGRTP55899 365 aa17.49■□□□□ 0.39
TMEM39A-205ENST00000468676 COG2Q14746 738 aa17.49■□□□□ 0.39
TMEM39A-205ENST00000468676 RRP12Q5JTH9 1297 aaKnown RBP17.49■□□□□ 0.39
TMEM39A-205ENST00000468676 LBX2Q6XYB7 198 aa17.49■□□□□ 0.39
TMEM39A-205ENST00000468676 TANGO6Q9C0B7 1094 aa17.49■□□□□ 0.39
TMEM39A-205ENST00000468676 NBPF3Q9H094 633 aa17.49■□□□□ 0.39
TMEM39A-205ENST00000468676 INCENPQ9NQS7 918 aa17.49■□□□□ 0.39
TMEM39A-205ENST00000468676 TCP11L1Q9NUJ3 509 aa17.49■□□□□ 0.39
TMEM39A-205ENST00000468676 FMNL1O95466 1100 aaPredicted RBP17.48■□□□□ 0.39
TMEM39A-205ENST00000468676 TBC1D10CQ8IV04 446 aa17.48■□□□□ 0.39
TMEM39A-205ENST00000468676 SPICE1Q8N0Z3 855 aa17.48■□□□□ 0.39
TMEM39A-205ENST00000468676 GMCL1P1Q8NEA9 526 aa17.48■□□□□ 0.39
TMEM39A-205ENST00000468676 GPRC5AQ8NFJ5 357 aa17.48■□□□□ 0.39
TMEM39A-205ENST00000468676 ESR2Q92731 530 aa17.48■□□□□ 0.39
TMEM39A-205ENST00000468676 ESYT1Q9BSJ8 1104 aa17.48■□□□□ 0.39
TMEM39A-205ENST00000468676 CNNM2Q9H8M5 875 aa17.48■□□□□ 0.39
TMEM39A-205ENST00000468676 RABGAP1Q9Y3P9 1069 aa17.48■□□□□ 0.39
TMEM39A-205ENST00000468676 TACC3Q9Y6A5 838 aa17.48■□□□□ 0.39
TMEM39A-205ENST00000468676 MYPNQ86TC9 1320 aa17.47■□□□□ 0.39
TMEM39A-205ENST00000468676 F5H6K3 240 aa17.47■□□□□ 0.39
TMEM39A-205ENST00000468676 CDC45O75419 566 aa17.47■□□□□ 0.39
TMEM39A-205ENST00000468676 KLRC3Q07444 240 aa17.47■□□□□ 0.39
TMEM39A-205ENST00000468676 CCDC178Q5BJE1 867 aa17.47■□□□□ 0.39
TMEM39A-205ENST00000468676 KIAA1755Q5JYT7 1200 aa17.47■□□□□ 0.39
TMEM39A-205ENST00000468676 MAP4K1Q92918 833 aa17.47■□□□□ 0.39
TMEM39A-205ENST00000468676 TRIM47Q96LD4 638 aa17.47■□□□□ 0.39
TMEM39A-205ENST00000468676 KRT23Q9C075 422 aa17.47■□□□□ 0.39
TMEM39A-205ENST00000468676 RBPJLQ9UBG7 517 aa17.47■□□□□ 0.39
TMEM39A-205ENST00000468676 PTPN22Q9Y2R2 807 aa17.47■□□□□ 0.39
TMEM39A-205ENST00000468676 MGAMO43451 1857 aa17.47■□□□□ 0.39
TMEM39A-205ENST00000468676 RAD21O60216 631 aa17.46■□□□□ 0.39
TMEM39A-205ENST00000468676 NOVP48745 357 aa17.46■□□□□ 0.39
TMEM39A-205ENST00000468676 PTH1RQ03431 593 aa17.46■□□□□ 0.39
TMEM39A-205ENST00000468676 MB21D1Q8N884 522 aa17.46■□□□□ 0.39
TMEM39A-205ENST00000468676 ABHD8Q96I13 439 aa17.46■□□□□ 0.39
TMEM39A-205ENST00000468676 TTC14Q96N46 770 aa17.46■□□□□ 0.39
TMEM39A-205ENST00000468676 ARHGAP39Q9C0H5 1083 aa17.46■□□□□ 0.39
TMEM39A-205ENST00000468676 IL17RBQ9NRM6 502 aa17.46■□□□□ 0.39
TMEM39A-205ENST00000468676 STX8Q9UNK0 236 aa17.46■□□□□ 0.39
TMEM39A-205ENST00000468676 SPDYE16A6NNV3 312 aaPredicted RBP17.45■□□□□ 0.38
TMEM39A-205ENST00000468676 FLOT1O75955 427 aa17.45■□□□□ 0.38
TMEM39A-205ENST00000468676 NDUFB10O96000 172 aa17.45■□□□□ 0.38
TMEM39A-205ENST00000468676 DSG3P32926 999 aa17.45■□□□□ 0.38
TMEM39A-205ENST00000468676 ERVK-9P63128 1117 aa17.45■□□□□ 0.38
TMEM39A-205ENST00000468676 ERVK-24P63145 666 aa17.45■□□□□ 0.38
TMEM39A-205ENST00000468676 CCNA1P78396 465 aa17.45■□□□□ 0.38
TMEM39A-205ENST00000468676 IQCA1Q86XH1 822 aa17.45■□□□□ 0.38
TMEM39A-205ENST00000468676 COA7Q96BR5 231 aa17.45■□□□□ 0.38
TMEM39A-205ENST00000468676 SRRDQ9UH36 339 aa17.45■□□□□ 0.38
TMEM39A-205ENST00000468676 TNPO2O14787 897 aaKnown RBP17.44■□□□□ 0.38
TMEM39A-205ENST00000468676 MAPK4P31152 587 aa17.44■□□□□ 0.38
TMEM39A-205ENST00000468676 CAP1Q01518 475 aa17.44■□□□□ 0.38
TMEM39A-205ENST00000468676 TRDNQ13061 729 aa17.44■□□□□ 0.38
TMEM39A-205ENST00000468676 FAM83BQ5T0W9 1011 aa17.44■□□□□ 0.38
TMEM39A-205ENST00000468676 CCAR1Q8IX12 1150 aaKnown RBP17.44■□□□□ 0.38
TMEM39A-205ENST00000468676 LRRC47Q8N1G4 583 aaKnown RBP17.44■□□□□ 0.38
TMEM39A-205ENST00000468676 GMCL1Q96IK5 515 aa17.44■□□□□ 0.38
TMEM39A-205ENST00000468676 PAGR1Q9BTK6 254 aa17.44■□□□□ 0.38
TMEM39A-205ENST00000468676 TXNRD2Q9NNW7 524 aa17.44■□□□□ 0.38
TMEM39A-205ENST00000468676 NEDD4P46934 1319 aa17.44■□□□□ 0.38
TMEM39A-205ENST00000468676 RLFQ13129 1914 aa17.43■□□□□ 0.38
TMEM39A-205ENST00000468676 NMT2O60551 498 aa17.43■□□□□ 0.38
TMEM39A-205ENST00000468676 TOP1P11387 765 aaKnown RBP17.43■□□□□ 0.38
TMEM39A-205ENST00000468676 CTGFP29279 349 aa17.43■□□□□ 0.38
TMEM39A-205ENST00000468676 SLFN13Q68D06 897 aa17.43■□□□□ 0.38
TMEM39A-205ENST00000468676 LSG1Q9H089 658 aaKnown RBP17.43■□□□□ 0.38
TMEM39A-205ENST00000468676 FEM1BQ9UK73 627 aa17.43■□□□□ 0.38
TMEM39A-205ENST00000468676 HPS5Q9UPZ3 1129 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms