RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 TPM1P09493 284 aa17.96■□□□□ 0.46
TSPAN4-211ENST00000468468 CASP1P29466 404 aa17.96■□□□□ 0.46
TSPAN4-211ENST00000468468 STX17P56962 302 aa17.96■□□□□ 0.46
TSPAN4-211ENST00000468468 MAP3K9P80192 1104 aa17.96■□□□□ 0.46
TSPAN4-211ENST00000468468 ENAHQ8N8S7 591 aaPredicted RBP17.96■□□□□ 0.46
TSPAN4-211ENST00000468468 ZSCAN10Q96SZ4 725 aaPredicted RBP17.96■□□□□ 0.46
TSPAN4-211ENST00000468468 SETDB2Q96T68 719 aa17.96■□□□□ 0.46
TSPAN4-211ENST00000468468 V9GY48 417 aaPredicted RBP17.96■□□□□ 0.46
TSPAN4-211ENST00000468468 AKR1B15C9JRZ8 316 aaPredicted RBP17.95■□□□□ 0.46
TSPAN4-211ENST00000468468 TEX33O43247 280 aa17.95■□□□□ 0.46
TSPAN4-211ENST00000468468 PAGE5Q96GU1 130 aa17.95■□□□□ 0.46
TSPAN4-211ENST00000468468 GJD4Q96KN9 370 aaPredicted RBP17.95■□□□□ 0.46
TSPAN4-211ENST00000468468 MINPP1Q9UNW1 487 aa17.95■□□□□ 0.46
TSPAN4-211ENST00000468468 CD44P16070 742 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-211ENST00000468468 SPATA1Q5VX52 437 aa17.95■□□□□ 0.46
TSPAN4-211ENST00000468468 NBPF5PQ86XG9 351 aaPredicted RBP17.95■□□□□ 0.46
TSPAN4-211ENST00000468468 SYMPKQ92797 1274 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-211ENST00000468468 ARHGEF1Q92888 912 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-211ENST00000468468 BSDC1Q9NW68 430 aaPredicted RBP17.95■□□□□ 0.46
TSPAN4-211ENST00000468468 RTCBQ9Y3I0 505 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-211ENST00000468468 THSD7AQ9UPZ6 1657 aa17.95■□□□□ 0.46
TSPAN4-211ENST00000468468 PRPF3O43395 683 aaKnown RBP17.94■□□□□ 0.46
TSPAN4-211ENST00000468468 ZRANB2O95218 330 aaKnown RBP eCLIP17.94■□□□□ 0.46
TSPAN4-211ENST00000468468 PLEKHA8P1O95397 391 aa17.94■□□□□ 0.46
TSPAN4-211ENST00000468468 MTF1Q14872 753 aa17.94■□□□□ 0.46
TSPAN4-211ENST00000468468 KARSQ15046 597 aaKnown RBP17.94■□□□□ 0.46
TSPAN4-211ENST00000468468 IFIT1BQ5T764 474 aaKnown RBP17.94■□□□□ 0.46
TSPAN4-211ENST00000468468 CATIPQ7Z7H3 387 aa17.94■□□□□ 0.46
TSPAN4-211ENST00000468468 SCN7AQ01118 1682 aa17.94■□□□□ 0.46
TSPAN4-211ENST00000468468 CYP2D7A0A087X1C5 515 aa17.94■□□□□ 0.46
TSPAN4-211ENST00000468468 FUT2Q10981 343 aa17.94■□□□□ 0.46
TSPAN4-211ENST00000468468 EPC1Q9H2F5 836 aa17.94■□□□□ 0.46
TSPAN4-211ENST00000468468 SYNRGQ9UMZ2 1314 aa17.94■□□□□ 0.46
TSPAN4-211ENST00000468468 PPP2R3AQ06190 1150 aa17.93■□□□□ 0.46
TSPAN4-211ENST00000468468 ZNF174Q15697 407 aa17.93■□□□□ 0.46
TSPAN4-211ENST00000468468 CT47A1Q5JQC4 288 aaPredicted RBP17.93■□□□□ 0.46
TSPAN4-211ENST00000468468 SLC10A5Q5PT55 438 aa17.93■□□□□ 0.46
TSPAN4-211ENST00000468468 APTXQ7Z2E3 356 aaKnown RBP17.93■□□□□ 0.46
TSPAN4-211ENST00000468468 SH3RF1Q7Z6J0 888 aa17.93■□□□□ 0.46
TSPAN4-211ENST00000468468 KIFC2Q96AC6 838 aa17.93■□□□□ 0.46
TSPAN4-211ENST00000468468 MRFAP1Q9Y605 127 aa17.93■□□□□ 0.46
TSPAN4-211ENST00000468468 SOWAHDA6NJG2 315 aa17.93■□□□□ 0.46
TSPAN4-211ENST00000468468 WNT7AO00755 349 aa17.93■□□□□ 0.46
TSPAN4-211ENST00000468468 PLA2G4AP47712 749 aa17.93■□□□□ 0.46
TSPAN4-211ENST00000468468 CUL4BQ13620 913 aa17.93■□□□□ 0.46
TSPAN4-211ENST00000468468 PPFIBP1Q86W92 1011 aa17.93■□□□□ 0.46
TSPAN4-211ENST00000468468 CERS3Q8IU89 383 aa17.93■□□□□ 0.46
TSPAN4-211ENST00000468468 IGSF22Q8N9C0 903 aa17.93■□□□□ 0.46
TSPAN4-211ENST00000468468 CPLX3Q8WVH0 158 aa17.93■□□□□ 0.46
TSPAN4-211ENST00000468468 FERMT2Q96AC1 680 aa17.93■□□□□ 0.46
TSPAN4-211ENST00000468468 PANX2Q96RD6 677 aa17.93■□□□□ 0.46
TSPAN4-211ENST00000468468 MYH6P13533 1939 aa17.93■□□□□ 0.46
TSPAN4-211ENST00000468468 TULP1O00294 542 aaPredicted RBP17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 DYNLL1P63167 89 aaKnown RBP17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 RBL2Q08999 1139 aa17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 SMYD4Q8IYR2 804 aaPredicted RBP17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 RIOK1Q9BRS2 568 aaKnown RBP17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 MRPL44Q9H9J2 332 aaKnown RBP17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 BRMS1Q9HCU9 246 aa17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 NHSQ6T4R5 1651 aa17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 EP400Q96L91 3159 aa17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 ZNF804BA4D1E1 1349 aa17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 AFF2P51816 1311 aa17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 SEC31AO94979 1220 aaKnown RBP17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 BMP15O95972 392 aa17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 CCDC175P0C221 793 aa17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 KLRK1P26718 216 aa17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 DPYDQ12882 1025 aa17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 NOM1Q5C9Z4 860 aaKnown RBP17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 TEX35Q5T0J7 233 aa17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 NLRP3Q96P20 1036 aa17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 NYXQ9GZU5 481 aa17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 GNL3LQ9NVN8 582 aaKnown RBP17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 RBM28Q9NW13 759 aaKnown RBP17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 COL1A1P02452 1464 aaPredicted RBP17.92■□□□□ 0.46
TSPAN4-211ENST00000468468 UBE4AQ14139 1066 aa17.91■□□□□ 0.46
TSPAN4-211ENST00000468468 IQCA1Q86XH1 822 aa17.91■□□□□ 0.46
TSPAN4-211ENST00000468468 CCDC12Q8WUD4 166 aaPredicted RBP17.91■□□□□ 0.46
TSPAN4-211ENST00000468468 GSDMAQ96QA5 445 aa17.91■□□□□ 0.46
TSPAN4-211ENST00000468468 CASZ1Q86V15 1759 aa17.91■□□□□ 0.46
TSPAN4-211ENST00000468468 ADD3Q9UEY8 706 aaKnown RBP17.91■□□□□ 0.46
TSPAN4-211ENST00000468468 PPP1R3GB7ZBB8 358 aa17.91■□□□□ 0.46
TSPAN4-211ENST00000468468 RPS8P62241 208 aaKnown RBP17.91■□□□□ 0.46
TSPAN4-211ENST00000468468 TTC38Q5R3I4 469 aa17.91■□□□□ 0.46
TSPAN4-211ENST00000468468 CDKAL1Q5VV42 579 aa17.91■□□□□ 0.46
TSPAN4-211ENST00000468468 GPR161Q8N6U8 529 aaKnown RBP17.91■□□□□ 0.46
TSPAN4-211ENST00000468468 STAMQ92783 540 aa17.91■□□□□ 0.46
TSPAN4-211ENST00000468468 FAM84BQ96KN1 310 aaPredicted RBP17.91■□□□□ 0.46
TSPAN4-211ENST00000468468 IRX2Q9BZI1 471 aaPredicted RBP17.91■□□□□ 0.46
TSPAN4-211ENST00000468468 HSPA1LP34931 641 aa17.9■□□□□ 0.46
TSPAN4-211ENST00000468468 TROAPQ12815 778 aa17.9■□□□□ 0.46
TSPAN4-211ENST00000468468 FILIP1LQ4L180 1135 aa17.9■□□□□ 0.46
TSPAN4-211ENST00000468468 RAD9BQ6WBX8 426 aa17.9■□□□□ 0.46
TSPAN4-211ENST00000468468 CTAGE1Q96RT6 745 aa17.9■□□□□ 0.46
TSPAN4-211ENST00000468468 LZTFL1Q9NQ48 299 aa17.9■□□□□ 0.46
TSPAN4-211ENST00000468468 CALM1P0DP23 149 aa17.9■□□□□ 0.46
TSPAN4-211ENST00000468468 CALM2P0DP24 149 aa17.9■□□□□ 0.46
TSPAN4-211ENST00000468468 CALM3P0DP25 149 aa17.9■□□□□ 0.46
TSPAN4-211ENST00000468468 TPTE2Q6XPS3 522 aa17.9■□□□□ 0.46
TSPAN4-211ENST00000468468 RSRC2Q7L4I2 434 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms