RNA–Protein interactions for RNA: ENST00000468459.5

COL16A1-208, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-208ENST00000468459 NAPBQ9H115 298 aa17.56■□□□□ 0.4
COL16A1-208ENST00000468459 ARPP21Q9UBL0 812 aaPredicted RBP17.56■□□□□ 0.4
COL16A1-208ENST00000468459 ATAD5Q96QE3 1844 aa17.56■□□□□ 0.4
COL16A1-208ENST00000468459 MINDY4BA8MYZ0 360 aa17.55■□□□□ 0.4
COL16A1-208ENST00000468459 CDC45O75419 566 aa17.55■□□□□ 0.4
COL16A1-208ENST00000468459 CAPN2P17655 700 aa17.55■□□□□ 0.4
COL16A1-208ENST00000468459 ABCB5Q2M3G0 1257 aa17.55■□□□□ 0.4
COL16A1-208ENST00000468459 ACER1Q8TDN7 264 aa17.55■□□□□ 0.4
COL16A1-208ENST00000468459 DEFB118Q96PH6 123 aa17.55■□□□□ 0.4
COL16A1-208ENST00000468459 NACAP1Q9BZK3 213 aa17.55■□□□□ 0.4
COL16A1-208ENST00000468459 KIAA1683Q9H0B3 1180 aa17.55■□□□□ 0.4
COL16A1-208ENST00000468459 FARP2O94887 1054 aaPredicted RBP17.54■□□□□ 0.4
COL16A1-208ENST00000468459 HMGCRP04035 888 aa17.54■□□□□ 0.4
COL16A1-208ENST00000468459 MFAP1P55081 439 aaKnown RBP17.54■□□□□ 0.4
COL16A1-208ENST00000468459 TRIM32Q13049 653 aa17.54■□□□□ 0.4
COL16A1-208ENST00000468459 SBK1Q52WX2 424 aa17.54■□□□□ 0.4
COL16A1-208ENST00000468459 RUFY2Q8WXA3 655 aa17.54■□□□□ 0.4
COL16A1-208ENST00000468459 USP6NLQ92738 828 aa17.54■□□□□ 0.4
COL16A1-208ENST00000468459 ESYT1Q9BSJ8 1104 aa17.54■□□□□ 0.4
COL16A1-208ENST00000468459 PCDH10Q9P2E7 1040 aa17.54■□□□□ 0.4
COL16A1-208ENST00000468459 TAOK2Q9UL54 1235 aa17.54■□□□□ 0.4
COL16A1-208ENST00000468459 COLQQ9Y215 455 aaPredicted RBP17.54■□□□□ 0.4
COL16A1-208ENST00000468459 MGAMO43451 1857 aa17.54■□□□□ 0.4
COL16A1-208ENST00000468459 CEP290O15078 2479 aa17.54■□□□□ 0.4
COL16A1-208ENST00000468459 ROBO3Q96MS0 1386 aa17.53■□□□□ 0.4
COL16A1-208ENST00000468459 CNMDO75829 334 aa17.53■□□□□ 0.4
COL16A1-208ENST00000468459 FGAP02671 866 aa17.53■□□□□ 0.4
COL16A1-208ENST00000468459 XRCC5P13010 732 aaKnown RBP17.53■□□□□ 0.4
COL16A1-208ENST00000468459 ERVK-9P63128 1117 aa17.53■□□□□ 0.4
COL16A1-208ENST00000468459 ERVK-24P63145 666 aa17.53■□□□□ 0.4
COL16A1-208ENST00000468459 PTH1RQ03431 593 aa17.53■□□□□ 0.4
COL16A1-208ENST00000468459 RAB3GAP1Q15042 981 aa17.53■□□□□ 0.4
COL16A1-208ENST00000468459 ALX1Q15699 326 aa17.53■□□□□ 0.4
COL16A1-208ENST00000468459 MAP3K21Q5TCX8 1036 aa17.53■□□□□ 0.4
COL16A1-208ENST00000468459 AMOTL1Q8IY63 956 aa17.53■□□□□ 0.4
COL16A1-208ENST00000468459 GTF3C2Q8WUA4 911 aaPredicted RBP17.53■□□□□ 0.4
COL16A1-208ENST00000468459 TRIB2Q92519 343 aa17.53■□□□□ 0.4
COL16A1-208ENST00000468459 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.53■□□□□ 0.4
COL16A1-208ENST00000468459 PORCNQ9H237 461 aa17.53■□□□□ 0.4
COL16A1-208ENST00000468459 TACC3Q9Y6A5 838 aa17.53■□□□□ 0.4
COL16A1-208ENST00000468459 SZT2Q5T011 3432 aa17.53■□□□□ 0.4
COL16A1-208ENST00000468459 DOCK3Q8IZD9 2030 aa17.52■□□□□ 0.4
COL16A1-208ENST00000468459 USP17L15C9J2P7 530 aa17.52■□□□□ 0.4
COL16A1-208ENST00000468459 USP17L13C9JLJ4 530 aa17.52■□□□□ 0.4
COL16A1-208ENST00000468459 USP17L11C9JVI0 530 aa17.52■□□□□ 0.4
COL16A1-208ENST00000468459 USP17L18D6R9N7 530 aa17.52■□□□□ 0.4
COL16A1-208ENST00000468459 USP17L22D6RA61 530 aa17.52■□□□□ 0.4
COL16A1-208ENST00000468459 USP17L17D6RBQ6 530 aa17.52■□□□□ 0.4
COL16A1-208ENST00000468459 USP17L19D6RCP7 530 aa17.52■□□□□ 0.4
COL16A1-208ENST00000468459 USP17L20D6RJB6 530 aa17.52■□□□□ 0.4
COL16A1-208ENST00000468459 VCAM1P19320 739 aa17.52■□□□□ 0.4
COL16A1-208ENST00000468459 CDK8P49336 464 aa17.52■□□□□ 0.4
COL16A1-208ENST00000468459 USP14P54578 494 aa17.52■□□□□ 0.4
COL16A1-208ENST00000468459 HAND2P61296 217 aa17.52■□□□□ 0.4
COL16A1-208ENST00000468459 CTDSPL2Q05D32 466 aa17.52■□□□□ 0.4
COL16A1-208ENST00000468459 PPARAQ07869 468 aa17.52■□□□□ 0.4
COL16A1-208ENST00000468459 USP17L24Q0WX57 530 aa17.52■□□□□ 0.4
COL16A1-208ENST00000468459 CATSPERGQ6ZRH7 1159 aa17.52■□□□□ 0.4
COL16A1-208ENST00000468459 C16orf86Q6ZW13 317 aa17.52■□□□□ 0.4
COL16A1-208ENST00000468459 ZMYM6O95789 1325 aa17.51■□□□□ 0.39
COL16A1-208ENST00000468459 RPTORQ8N122 1335 aa17.51■□□□□ 0.39
COL16A1-208ENST00000468459 LAMA3Q16787 3333 aa17.51■□□□□ 0.39
COL16A1-208ENST00000468459 A0A1W2PRG0 241 aa17.51■□□□□ 0.39
COL16A1-208ENST00000468459 CYP2B6P20813 491 aa17.51■□□□□ 0.39
COL16A1-208ENST00000468459 MAPK4P31152 587 aa17.51■□□□□ 0.39
COL16A1-208ENST00000468459 FXR1P51114 621 aaKnown RBP eCLIP17.51■□□□□ 0.39
COL16A1-208ENST00000468459 SEPT2Q15019 361 aa17.51■□□□□ 0.39
COL16A1-208ENST00000468459 ZYXQ15942 572 aaKnown RBP17.51■□□□□ 0.39
COL16A1-208ENST00000468459 MORN1Q5T089 497 aa17.51■□□□□ 0.39
COL16A1-208ENST00000468459 LBX2Q6XYB7 198 aa17.51■□□□□ 0.39
COL16A1-208ENST00000468459 SOCS4Q8WXH5 440 aa17.51■□□□□ 0.39
COL16A1-208ENST00000468459 DPF3Q92784 378 aa17.51■□□□□ 0.39
COL16A1-208ENST00000468459 NUDT12Q9BQG2 462 aa17.51■□□□□ 0.39
COL16A1-208ENST00000468459 HTATIP2Q9BUP3 242 aa17.51■□□□□ 0.39
COL16A1-208ENST00000468459 DSCC1Q9BVC3 393 aa17.51■□□□□ 0.39
COL16A1-208ENST00000468459 NBPF3Q9H094 633 aa17.51■□□□□ 0.39
COL16A1-208ENST00000468459 CABP5Q9NP86 173 aa17.51■□□□□ 0.39
COL16A1-208ENST00000468459 INCENPQ9NQS7 918 aa17.51■□□□□ 0.39
COL16A1-208ENST00000468459 RABGAP1Q9Y3P9 1069 aa17.51■□□□□ 0.39
COL16A1-208ENST00000468459 PRDM1O75626 825 aa17.5■□□□□ 0.39
COL16A1-208ENST00000468459 TFRCP02786 760 aaKnown RBP17.5■□□□□ 0.39
COL16A1-208ENST00000468459 MNX1P50219 401 aaPredicted RBP17.5■□□□□ 0.39
COL16A1-208ENST00000468459 GPR142Q7Z601 462 aa17.5■□□□□ 0.39
COL16A1-208ENST00000468459 SIAH1Q8IUQ4 282 aa17.5■□□□□ 0.39
COL16A1-208ENST00000468459 FEZ1Q99689 392 aa17.5■□□□□ 0.39
COL16A1-208ENST00000468459 PRO3102Q9H379 93 aa17.5■□□□□ 0.39
COL16A1-208ENST00000468459 SWAP70Q9UH65 585 aa17.5■□□□□ 0.39
COL16A1-208ENST00000468459 AKR1B1P15121 316 aa17.49■□□□□ 0.39
COL16A1-208ENST00000468459 TBC1D10CQ8IV04 446 aa17.49■□□□□ 0.39
COL16A1-208ENST00000468459 PAGR1Q9BTK6 254 aa17.49■□□□□ 0.39
COL16A1-208ENST00000468459 LSG1Q9H089 658 aaKnown RBP17.49■□□□□ 0.39
COL16A1-208ENST00000468459 HMX1Q9NP08 348 aaPredicted RBP17.49■□□□□ 0.39
COL16A1-208ENST00000468459 SPDYE16A6NNV3 312 aaPredicted RBP17.48■□□□□ 0.39
COL16A1-208ENST00000468459 RASA1P20936 1047 aa17.48■□□□□ 0.39
COL16A1-208ENST00000468459 CASC1Q6TDU7 716 aa17.48■□□□□ 0.39
COL16A1-208ENST00000468459 PLEKHH3Q7Z736 793 aa17.48■□□□□ 0.39
COL16A1-208ENST00000468459 CLEC10AQ8IUN9 316 aa17.48■□□□□ 0.39
COL16A1-208ENST00000468459 ANKLE1Q8NAG6 615 aa17.48■□□□□ 0.39
COL16A1-208ENST00000468459 DIS3LQ8TF46 1054 aaKnown RBP17.48■□□□□ 0.39
COL16A1-208ENST00000468459 PAWRQ96IZ0 340 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms