RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 B4GALNT3Q6L9W6 998 aa6.31□□□□□ -1.4
SSR3-204ENST00000467733 SLC38A3Q99624 504 aa6.31□□□□□ -1.4
SSR3-204ENST00000467733 ATXN3LQ9H3M9 355 aa6.31□□□□□ -1.4
SSR3-204ENST00000467733 ZNF576Q9H609 170 aa6.31□□□□□ -1.4
SSR3-204ENST00000467733 PIDD1Q9HB75 910 aa6.31□□□□□ -1.4
SSR3-204ENST00000467733 MKNK2Q9HBH9 465 aa6.31□□□□□ -1.4
SSR3-204ENST00000467733 CCDC9Q9Y3X0 531 aaKnown RBP6.31□□□□□ -1.4
SSR3-204ENST00000467733 CASZ1Q86V15 1759 aa6.31□□□□□ -1.4
SSR3-204ENST00000467733 ECEL1O95672 775 aa6.3□□□□□ -1.4
SSR3-204ENST00000467733 FKBP4Q02790 459 aaKnown RBP eCLIP6.3□□□□□ -1.4
SSR3-204ENST00000467733 FAM50AQ14320 339 aaKnown RBP6.3□□□□□ -1.4
SSR3-204ENST00000467733 KIAA0319Q5VV43 1072 aa6.3□□□□□ -1.4
SSR3-204ENST00000467733 SPOCD1Q6ZMY3 1216 aa6.3□□□□□ -1.4
SSR3-204ENST00000467733 PLD6Q8N2A8 252 aaKnown RBP6.3□□□□□ -1.4
SSR3-204ENST00000467733 RRBP1Q9P2E9 1410 aaKnown RBP6.3□□□□□ -1.4
SSR3-204ENST00000467733 NRKQ7Z2Y5 1582 aa6.3□□□□□ -1.4
SSR3-204ENST00000467733 ARHGEF10O15013 1369 aa6.3□□□□□ -1.4
SSR3-204ENST00000467733 RNASE1P07998 156 aaKnown RBP6.29□□□□□ -1.4
SSR3-204ENST00000467733 FAM87AP0C7U9 286 aa6.29□□□□□ -1.4
SSR3-204ENST00000467733 CD8BP10966 210 aa6.29□□□□□ -1.4
SSR3-204ENST00000467733 PTPN12Q05209 780 aaKnown RBP6.29□□□□□ -1.4
SSR3-204ENST00000467733 BNIP3Q12983 259 aa6.29□□□□□ -1.4
SSR3-204ENST00000467733 EZH2Q15910 746 aaKnown RBP6.29□□□□□ -1.4
SSR3-204ENST00000467733 IFI16Q16666 785 aaKnown RBP6.29□□□□□ -1.4
SSR3-204ENST00000467733 KRTAP19-4Q3LI73 84 aa6.29□□□□□ -1.4
SSR3-204ENST00000467733 BHLHE22Q8NFJ8 381 aaPredicted RBP6.29□□□□□ -1.4
SSR3-204ENST00000467733 PI4K2BQ8TCG2 481 aa6.29□□□□□ -1.4
SSR3-204ENST00000467733 CAMKK2Q96RR4 588 aa6.29□□□□□ -1.4
SSR3-204ENST00000467733 LGR6Q9HBX8 967 aa6.29□□□□□ -1.4
SSR3-204ENST00000467733 MBNL3Q9NUK0 354 aaKnown RBP6.29□□□□□ -1.4
SSR3-204ENST00000467733 MYOM1P52179 1685 aa6.29□□□□□ -1.4
SSR3-204ENST00000467733 SBNO1A3KN83 1393 aa6.29□□□□□ -1.4
SSR3-204ENST00000467733 NRXN1Q9ULB1 1477 aa6.28□□□□□ -1.4
SSR3-204ENST00000467733 GOLGB1Q14789 3259 aaKnown RBP6.28□□□□□ -1.4
SSR3-204ENST00000467733 TMEM88BA6NKF7 163 aa6.28□□□□□ -1.4
SSR3-204ENST00000467733 TMPRSS2O15393 492 aa6.28□□□□□ -1.4
SSR3-204ENST00000467733 SLFN14P0C7P3 912 aa6.28□□□□□ -1.4
SSR3-204ENST00000467733 CDK5R2Q13319 367 aa6.28□□□□□ -1.4
SSR3-204ENST00000467733 ARHGAP27Q6ZUM4 889 aa6.28□□□□□ -1.4
SSR3-204ENST00000467733 HRASLS5Q96KN8 279 aa6.28□□□□□ -1.4
SSR3-204ENST00000467733 CCDC87Q9NVE4 849 aa6.28□□□□□ -1.4
SSR3-204ENST00000467733 CRIM1Q9NZV1 1036 aa6.28□□□□□ -1.4
SSR3-204ENST00000467733 PPP1R9AQ9ULJ8 1098 aa6.28□□□□□ -1.4
SSR3-204ENST00000467733 CEACAM5P06731 702 aa6.27□□□□□ -1.41
SSR3-204ENST00000467733 ID3Q02535 119 aa6.27□□□□□ -1.41
SSR3-204ENST00000467733 LCE4AQ5TA78 99 aa6.27□□□□□ -1.41
SSR3-204ENST00000467733 ANGEL2Q5VTE6 544 aaKnown RBP6.27□□□□□ -1.41
SSR3-204ENST00000467733 KRT28Q7Z3Y7 464 aa6.27□□□□□ -1.41
SSR3-204ENST00000467733 FAM181AQ8N9Y4 354 aa6.27□□□□□ -1.41
SSR3-204ENST00000467733 LRRN4CLQ8ND94 238 aa6.27□□□□□ -1.41
SSR3-204ENST00000467733 EHD4Q9H223 541 aa6.27□□□□□ -1.41
SSR3-204ENST00000467733 SPON1Q9HCB6 807 aa6.27□□□□□ -1.41
SSR3-204ENST00000467733 PPP1R1BQ9UD71 204 aaPredicted RBP6.27□□□□□ -1.41
SSR3-204ENST00000467733 ADAMTS6Q9UKP5 1117 aa6.27□□□□□ -1.41
SSR3-204ENST00000467733 SBF2Q86WG5 1849 aa6.27□□□□□ -1.41
SSR3-204ENST00000467733 SPATA31A5Q5VU36 1347 aa6.26□□□□□ -1.41
SSR3-204ENST00000467733 SPATA31A7Q8IWB4 1347 aa6.26□□□□□ -1.41
SSR3-204ENST00000467733 PHRF1Q9P1Y6 1649 aaKnown RBP6.26□□□□□ -1.41
SSR3-204ENST00000467733 PARP4Q9UKK3 1724 aaKnown RBP6.26□□□□□ -1.41
SSR3-204ENST00000467733 TMEM265A0A087WTH1 108 aa6.26□□□□□ -1.41
SSR3-204ENST00000467733 RPS26P11Q5JNZ5 115 aaPredicted RBP6.26□□□□□ -1.41
SSR3-204ENST00000467733 SMYD4Q8IYR2 804 aaPredicted RBP6.26□□□□□ -1.41
SSR3-204ENST00000467733 FAM84AQ96KN4 292 aa6.26□□□□□ -1.41
SSR3-204ENST00000467733 FANCD2OSQ96PS1 177 aa6.26□□□□□ -1.41
SSR3-204ENST00000467733 RPGRIP1LQ68CZ1 1315 aa6.25□□□□□ -1.41
SSR3-204ENST00000467733 FAM83GA6ND36 823 aa6.25□□□□□ -1.41
SSR3-204ENST00000467733 KCNQ2O43526 872 aa6.25□□□□□ -1.41
SSR3-204ENST00000467733 TRIM37O94972 964 aa6.25□□□□□ -1.41
SSR3-204ENST00000467733 ABL1P00519 1130 aa6.25□□□□□ -1.41
SSR3-204ENST00000467733 C1QTNF8P60827 252 aa6.25□□□□□ -1.41
SSR3-204ENST00000467733 AOC3Q16853 763 aa6.25□□□□□ -1.41
SSR3-204ENST00000467733 PRPF40BQ6NWY9 871 aaKnown RBP6.25□□□□□ -1.41
SSR3-204ENST00000467733 SLC23A3Q6PIS1 610 aa6.25□□□□□ -1.41
SSR3-204ENST00000467733 FAM196AQ6ZSG2 479 aa6.25□□□□□ -1.41
SSR3-204ENST00000467733 RETREG2Q8NC44 543 aa6.25□□□□□ -1.41
SSR3-204ENST00000467733 FLAD1Q8NFF5 587 aa6.25□□□□□ -1.41
SSR3-204ENST00000467733 KRT82Q9NSB4 513 aa6.25□□□□□ -1.41
SSR3-204ENST00000467733 BTG4Q9NY30 223 aa6.25□□□□□ -1.41
SSR3-204ENST00000467733 FAM53CQ9NYF3 392 aa6.25□□□□□ -1.41
SSR3-204ENST00000467733 ABCC11Q96J66 1382 aa6.25□□□□□ -1.41
SSR3-204ENST00000467733 PLEKHH1Q9ULM0 1364 aa6.25□□□□□ -1.41
SSR3-204ENST00000467733 LIG1P18858 919 aa6.24□□□□□ -1.41
SSR3-204ENST00000467733 KIF4BQ2VIQ3 1234 aa6.24□□□□□ -1.41
SSR3-204ENST00000467733 NBPF8Q3BBV2 869 aa6.24□□□□□ -1.41
SSR3-204ENST00000467733 KRTAP4-2Q9BYR5 136 aa6.24□□□□□ -1.41
SSR3-204ENST00000467733 CCDC86Q9H6F5 360 aaKnown RBP6.24□□□□□ -1.41
SSR3-204ENST00000467733 BRPF3Q9ULD4 1205 aa6.24□□□□□ -1.41
SSR3-204ENST00000467733 PEAK1Q9H792 1746 aa6.24□□□□□ -1.41
SSR3-204ENST00000467733 DLC1Q96QB1 1528 aa6.24□□□□□ -1.41
SSR3-204ENST00000467733 ANKARQ7Z5J8 1434 aa6.24□□□□□ -1.41
SSR3-204ENST00000467733 WNK3Q9BYP7 1800 aa6.23□□□□□ -1.41
SSR3-204ENST00000467733 ITSN1Q15811 1721 aa6.23□□□□□ -1.41
SSR3-204ENST00000467733 CPNE3O75131 537 aaKnown RBP6.23□□□□□ -1.41
SSR3-204ENST00000467733 OXCT1P55809 520 aa6.23□□□□□ -1.41
SSR3-204ENST00000467733 PDE3BQ13370 1112 aa6.23□□□□□ -1.41
SSR3-204ENST00000467733 ZNF211Q13398 564 aaPredicted RBP6.23□□□□□ -1.41
SSR3-204ENST00000467733 WAPLQ7Z5K2 1190 aa6.23□□□□□ -1.41
SSR3-204ENST00000467733 ZSWIM9Q86XI8 627 aa6.23□□□□□ -1.41
SSR3-204ENST00000467733 DUSP23Q9BVJ7 150 aa6.23□□□□□ -1.41
SSR3-204ENST00000467733 ABCB6Q9NP58 842 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms