RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 HSD3B7Q9H2F3 369 aa13.09□□□□□ -0.31
HPS1-208ENST00000467246 ROBO3Q96MS0 1386 aa13.09□□□□□ -0.31
HPS1-208ENST00000467246 KLRG2A4D1S0 409 aaPredicted RBP13.09□□□□□ -0.31
HPS1-208ENST00000467246 PRR29P0C7W0 189 aa13.09□□□□□ -0.31
HPS1-208ENST00000467246 KIF5BP33176 963 aa13.09□□□□□ -0.31
HPS1-208ENST00000467246 NLRP5P59047 1200 aa13.09□□□□□ -0.31
HPS1-208ENST00000467246 LRRC8AQ8IWT6 810 aa13.09□□□□□ -0.31
HPS1-208ENST00000467246 EPSTI1Q96J88 318 aa13.09□□□□□ -0.31
HPS1-208ENST00000467246 XPO4Q9C0E2 1151 aaKnown RBP13.09□□□□□ -0.31
HPS1-208ENST00000467246 BRMS1Q9HCU9 246 aa13.09□□□□□ -0.31
HPS1-208ENST00000467246 IFNKQ9P0W0 207 aa13.09□□□□□ -0.31
HPS1-208ENST00000467246 RIMBP2O15034 1052 aa13.08□□□□□ -0.32
HPS1-208ENST00000467246 ATP1A3P13637 1013 aa13.08□□□□□ -0.32
HPS1-208ENST00000467246 RASA1P20936 1047 aa13.08□□□□□ -0.32
HPS1-208ENST00000467246 OLFM4Q6UX06 510 aa13.08□□□□□ -0.32
HPS1-208ENST00000467246 TEX11Q8IYF3 940 aa13.08□□□□□ -0.32
HPS1-208ENST00000467246 ANKS1AQ92625 1134 aa13.08□□□□□ -0.32
HPS1-208ENST00000467246 STX8Q9UNK0 236 aa13.08□□□□□ -0.32
HPS1-208ENST00000467246 SMTNL1A8MU46 457 aa13.08□□□□□ -0.32
HPS1-208ENST00000467246 SMC2O95347 1197 aa13.08□□□□□ -0.32
HPS1-208ENST00000467246 RHBDL3P58872 404 aa13.08□□□□□ -0.32
HPS1-208ENST00000467246 POSTNQ15063 836 aa13.08□□□□□ -0.32
HPS1-208ENST00000467246 SLC35G1Q2M3R5 365 aa13.08□□□□□ -0.32
HPS1-208ENST00000467246 PIK3AP1Q6ZUJ8 805 aa13.08□□□□□ -0.32
HPS1-208ENST00000467246 GPKOWQ92917 476 aaPredicted RBP eCLIP13.08□□□□□ -0.32
HPS1-208ENST00000467246 A0A087X0B3 334 aa13.07□□□□□ -0.32
HPS1-208ENST00000467246 PPEF1O14829 653 aaPredicted RBP13.07□□□□□ -0.32
HPS1-208ENST00000467246 IKBKBO14920 756 aa13.07□□□□□ -0.32
HPS1-208ENST00000467246 GTF2IP78347 998 aa13.07□□□□□ -0.32
HPS1-208ENST00000467246 ZNF827Q17R98 1081 aa13.07□□□□□ -0.32
HPS1-208ENST00000467246 TTC38Q5R3I4 469 aa13.07□□□□□ -0.32
HPS1-208ENST00000467246 MAD2L2Q9UI95 211 aa13.07□□□□□ -0.32
HPS1-208ENST00000467246 BRWD3Q6RI45 1802 aa13.07□□□□□ -0.32
HPS1-208ENST00000467246 ACTN4O43707 911 aaKnown RBP13.07□□□□□ -0.32
HPS1-208ENST00000467246 CDK8P49336 464 aa13.07□□□□□ -0.32
HPS1-208ENST00000467246 RASGRP2Q7LDG7 609 aa13.07□□□□□ -0.32
HPS1-208ENST00000467246 ELOA2Q8IYF1 753 aaPredicted RBP13.07□□□□□ -0.32
HPS1-208ENST00000467246 TMEM47Q9BQJ4 181 aa13.07□□□□□ -0.32
HPS1-208ENST00000467246 MAN1B1Q9UKM7 699 aa13.07□□□□□ -0.32
HPS1-208ENST00000467246 FLT1P17948 1338 aa13.06□□□□□ -0.32
HPS1-208ENST00000467246 PTGDRQ13258 359 aa13.06□□□□□ -0.32
HPS1-208ENST00000467246 GRM4Q14833 912 aa13.06□□□□□ -0.32
HPS1-208ENST00000467246 SP8Q8IXZ3 490 aa13.06□□□□□ -0.32
HPS1-208ENST00000467246 TCP11L1Q9NUJ3 509 aa13.06□□□□□ -0.32
HPS1-208ENST00000467246 GOLGB1Q14789 3259 aaKnown RBP13.06□□□□□ -0.32
HPS1-208ENST00000467246 CYTH3O43739 400 aa13.06□□□□□ -0.32
HPS1-208ENST00000467246 TPM4P67936 248 aa13.06□□□□□ -0.32
HPS1-208ENST00000467246 MYL5Q02045 173 aa13.06□□□□□ -0.32
HPS1-208ENST00000467246 TYW1BQ6NUM6 668 aa13.06□□□□□ -0.32
HPS1-208ENST00000467246 COL23A1Q86Y22 540 aaPredicted RBP13.06□□□□□ -0.32
HPS1-208ENST00000467246 SYMPKQ92797 1274 aaKnown RBP13.06□□□□□ -0.32
HPS1-208ENST00000467246 DHX58Q96C10 678 aa13.06□□□□□ -0.32
HPS1-208ENST00000467246 FAM163AQ96GL9 167 aaPredicted RBP13.06□□□□□ -0.32
HPS1-208ENST00000467246 HOOK1Q9UJC3 728 aaKnown RBP13.06□□□□□ -0.32
HPS1-208ENST00000467246 GOLGA8HP0CJ92 632 aa13.05□□□□□ -0.32
HPS1-208ENST00000467246 SARSP49591 514 aaKnown RBP13.05□□□□□ -0.32
HPS1-208ENST00000467246 CBX1P83916 185 aa13.05□□□□□ -0.32
HPS1-208ENST00000467246 FANCCQ00597 558 aa13.05□□□□□ -0.32
HPS1-208ENST00000467246 C16orf86Q6ZW13 317 aa13.05□□□□□ -0.32
HPS1-208ENST00000467246 TBC1D22AQ8WUA7 517 aa13.05□□□□□ -0.32
HPS1-208ENST00000467246 EYA3Q99504 573 aa13.05□□□□□ -0.32
HPS1-208ENST00000467246 FAM205AQ6ZU69 1335 aa13.05□□□□□ -0.32
HPS1-208ENST00000467246 VWA3AA6NCI4 1184 aa13.05□□□□□ -0.32
HPS1-208ENST00000467246 F8W031 263 aaPredicted RBP13.05□□□□□ -0.32
HPS1-208ENST00000467246 NT5DC1Q5TFE4 455 aa13.05□□□□□ -0.32
HPS1-208ENST00000467246 RASGRP4Q8TDF6 673 aa13.05□□□□□ -0.32
HPS1-208ENST00000467246 CPVLQ9H3G5 476 aa13.05□□□□□ -0.32
HPS1-208ENST00000467246 ATP6V0A2Q9Y487 856 aa13.05□□□□□ -0.32
HPS1-208ENST00000467246 MORC2Q9Y6X9 1032 aaPredicted RBP13.05□□□□□ -0.32
HPS1-208ENST00000467246 GAKO14976 1311 aa13.05□□□□□ -0.32
HPS1-208ENST00000467246 SRGNP10124 158 aa13.04□□□□□ -0.32
HPS1-208ENST00000467246 MCM7P33993 719 aa13.04□□□□□ -0.32
HPS1-208ENST00000467246 NT5C2P49902 561 aa13.04□□□□□ -0.32
HPS1-208ENST00000467246 CCDC178Q5BJE1 867 aa13.04□□□□□ -0.32
HPS1-208ENST00000467246 CERS3Q8IU89 383 aa13.04□□□□□ -0.32
HPS1-208ENST00000467246 NAV1Q8NEY1 1877 aa13.04□□□□□ -0.32
HPS1-208ENST00000467246 SMARCE1Q969G3 411 aa13.04□□□□□ -0.32
HPS1-208ENST00000467246 FERMT2Q96AC1 680 aa13.04□□□□□ -0.32
HPS1-208ENST00000467246 FANCLQ9NW38 375 aa13.04□□□□□ -0.32
HPS1-208ENST00000467246 DAGLAQ9Y4D2 1042 aa13.04□□□□□ -0.32
HPS1-208ENST00000467246 SNED1Q8TER0 1413 aa13.04□□□□□ -0.32
HPS1-208ENST00000467246 BMP15O95972 392 aa13.04□□□□□ -0.32
HPS1-208ENST00000467246 SKILP12757 684 aa13.04□□□□□ -0.32
HPS1-208ENST00000467246 PLCG2P16885 1265 aa13.04□□□□□ -0.32
HPS1-208ENST00000467246 CASP1P29466 404 aa13.04□□□□□ -0.32
HPS1-208ENST00000467246 CCZ1BP86790 482 aa13.04□□□□□ -0.32
HPS1-208ENST00000467246 CCZ1P86791 482 aaPredicted RBP13.04□□□□□ -0.32
HPS1-208ENST00000467246 ATP2C1P98194 919 aaPredicted RBP13.04□□□□□ -0.32
HPS1-208ENST00000467246 TMC6Q7Z403 805 aa13.04□□□□□ -0.32
HPS1-208ENST00000467246 BLIDQ8IZY5 108 aa13.04□□□□□ -0.32
HPS1-208ENST00000467246 DPF2Q92785 391 aa13.04□□□□□ -0.32
HPS1-208ENST00000467246 MXD3Q9BW11 206 aa13.04□□□□□ -0.32
HPS1-208ENST00000467246 PALM3A6NDB9 673 aaPredicted RBP13.03□□□□□ -0.32
HPS1-208ENST00000467246 AFMP43652 599 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 MORC3Q14149 939 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 IL17AQ16552 155 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 HSP90AA4PQ58FG1 418 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 SLF2Q8IX21 1173 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 NLGN1Q8N2Q7 840 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 CERS5Q8N5B7 392 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms