RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 ASPNQ9BXN1 380 aa7.89□□□□□ -1.15
PRPF40A-205ENST00000467114 RBM47A0AV96 593 aaKnown RBP7.88□□□□□ -1.15
PRPF40A-205ENST00000467114 CHURC1-FNTBB4DL54 471 aa7.88□□□□□ -1.15
PRPF40A-205ENST00000467114 MED14OSP0DP75 135 aa7.88□□□□□ -1.15
PRPF40A-205ENST00000467114 GBP2P32456 591 aaPredicted RBP7.88□□□□□ -1.15
PRPF40A-205ENST00000467114 SIAH1Q8IUQ4 282 aa7.88□□□□□ -1.15
PRPF40A-205ENST00000467114 LRRC56Q8IYG6 542 aaPredicted RBP7.88□□□□□ -1.15
PRPF40A-205ENST00000467114 BAHD1Q8TBE0 780 aaPredicted RBP7.88□□□□□ -1.15
PRPF40A-205ENST00000467114 CCDC74BQ96LY2 380 aa7.88□□□□□ -1.15
PRPF40A-205ENST00000467114 KREMEN1Q96MU8 473 aa7.88□□□□□ -1.15
PRPF40A-205ENST00000467114 KCNK12Q9HB15 430 aa7.88□□□□□ -1.15
PRPF40A-205ENST00000467114 PCDHA11Q9Y5I1 949 aa7.88□□□□□ -1.15
PRPF40A-205ENST00000467114 GRIN3BO60391 1043 aa7.87□□□□□ -1.15
PRPF40A-205ENST00000467114 GARTP22102 1010 aa7.87□□□□□ -1.15
PRPF40A-205ENST00000467114 TNNI2P48788 182 aa7.87□□□□□ -1.15
PRPF40A-205ENST00000467114 MPP2Q14168 576 aa7.87□□□□□ -1.15
PRPF40A-205ENST00000467114 NR0B2Q15466 257 aa7.87□□□□□ -1.15
PRPF40A-205ENST00000467114 REC114Q7Z4M0 266 aa7.87□□□□□ -1.15
PRPF40A-205ENST00000467114 LILRA2Q8N149 483 aa7.87□□□□□ -1.15
PRPF40A-205ENST00000467114 OXR1Q8N573 874 aa7.87□□□□□ -1.15
PRPF40A-205ENST00000467114 RNF32Q9H0A6 362 aa7.87□□□□□ -1.15
PRPF40A-205ENST00000467114 MRS2Q9HD23 443 aa7.87□□□□□ -1.15
PRPF40A-205ENST00000467114 KLHL3Q9UH77 587 aa7.87□□□□□ -1.15
PRPF40A-205ENST00000467114 FITM1A5D6W6 292 aa7.86□□□□□ -1.15
PRPF40A-205ENST00000467114 DNAJA2O60884 412 aa7.86□□□□□ -1.15
PRPF40A-205ENST00000467114 TMEM253P0C7T8 217 aa7.86□□□□□ -1.15
PRPF40A-205ENST00000467114 LTKP29376 864 aa7.86□□□□□ -1.15
PRPF40A-205ENST00000467114 TRHRP34981 398 aaPredicted RBP7.86□□□□□ -1.15
PRPF40A-205ENST00000467114 TAGLNQ01995 201 aaKnown RBP7.86□□□□□ -1.15
PRPF40A-205ENST00000467114 LCNL1Q6ZST4 164 aa7.86□□□□□ -1.15
PRPF40A-205ENST00000467114 GOLM1Q8NBJ4 401 aa7.86□□□□□ -1.15
PRPF40A-205ENST00000467114 DHX38Q92620 1227 aaKnown RBP7.86□□□□□ -1.15
PRPF40A-205ENST00000467114 VWCEQ96DN2 955 aa7.86□□□□□ -1.15
PRPF40A-205ENST00000467114 SLC26A8Q96RN1 970 aa7.86□□□□□ -1.15
PRPF40A-205ENST00000467114 CD320Q9NPF0 282 aa7.86□□□□□ -1.15
PRPF40A-205ENST00000467114 VTI1BQ9UEU0 232 aa7.86□□□□□ -1.15
PRPF40A-205ENST00000467114 GLDCP23378 1020 aa7.85□□□□□ -1.15
PRPF40A-205ENST00000467114 ITGAEP38570 1179 aa7.85□□□□□ -1.15
PRPF40A-205ENST00000467114 FAM160A1Q05DH4 1040 aa7.85□□□□□ -1.15
PRPF40A-205ENST00000467114 SNAP47Q5SQN1 464 aa7.85□□□□□ -1.15
PRPF40A-205ENST00000467114 C19orf44Q9H6X5 657 aa7.85□□□□□ -1.15
PRPF40A-205ENST00000467114 ZNF281Q9Y2X9 895 aa7.85□□□□□ -1.15
PRPF40A-205ENST00000467114 SHISA3A0PJX4 238 aa7.84□□□□□ -1.15
PRPF40A-205ENST00000467114 MINDY4BA8MYZ0 360 aa7.84□□□□□ -1.15
PRPF40A-205ENST00000467114 TIGD5Q53EQ6 642 aa7.84□□□□□ -1.15
PRPF40A-205ENST00000467114 ATG14Q6ZNE5 492 aa7.84□□□□□ -1.15
PRPF40A-205ENST00000467114 FAM196AQ6ZSG2 479 aa7.84□□□□□ -1.15
PRPF40A-205ENST00000467114 ERMP1Q7Z2K6 904 aa7.84□□□□□ -1.15
PRPF40A-205ENST00000467114 AMIGO3Q86WK7 504 aa7.84□□□□□ -1.15
PRPF40A-205ENST00000467114 IRF2BP1Q8IU81 584 aa7.84□□□□□ -1.15
PRPF40A-205ENST00000467114 KRTAP4-9Q9BYQ8 210 aa7.84□□□□□ -1.15
PRPF40A-205ENST00000467114 KCNQ5Q9NR82 932 aa7.84□□□□□ -1.15
PRPF40A-205ENST00000467114 PODXL2Q9NZ53 605 aa7.84□□□□□ -1.15
PRPF40A-205ENST00000467114 ROBO2Q9HCK4 1378 aa7.84□□□□□ -1.16
PRPF40A-205ENST00000467114 ETV2O00321 342 aaPredicted RBP7.83□□□□□ -1.16
PRPF40A-205ENST00000467114 RGS13O14921 159 aa7.83□□□□□ -1.16
PRPF40A-205ENST00000467114 TEKQ02763 1124 aa7.83□□□□□ -1.16
PRPF40A-205ENST00000467114 KCNA10Q16322 511 aa7.83□□□□□ -1.16
PRPF40A-205ENST00000467114 PHACTR4Q8IZ21 702 aa7.83□□□□□ -1.16
PRPF40A-205ENST00000467114 FBXO27Q8NI29 283 aa7.83□□□□□ -1.16
PRPF40A-205ENST00000467114 SYTL4Q96C24 671 aaPredicted RBP7.83□□□□□ -1.16
PRPF40A-205ENST00000467114 KIF2CQ99661 725 aa7.83□□□□□ -1.16
PRPF40A-205ENST00000467114 LRRC3Q9BY71 257 aa7.83□□□□□ -1.16
PRPF40A-205ENST00000467114 SLC6A17Q9H1V8 727 aa7.83□□□□□ -1.16
PRPF40A-205ENST00000467114 CWC22Q9HCG8 908 aaKnown RBP7.83□□□□□ -1.16
PRPF40A-205ENST00000467114 NPIPB6E9PJ23 425 aa7.82□□□□□ -1.16
PRPF40A-205ENST00000467114 ZSCAN22P10073 491 aaPredicted RBP7.82□□□□□ -1.16
PRPF40A-205ENST00000467114 CHRNEQ04844 493 aa7.82□□□□□ -1.16
PRPF40A-205ENST00000467114 SPPL2CQ8IUH8 684 aa7.82□□□□□ -1.16
PRPF40A-205ENST00000467114 ENOX1Q8TC92 643 aaKnown RBP7.82□□□□□ -1.16
PRPF40A-205ENST00000467114 LINC01599Q8WXQ3 324 aa7.82□□□□□ -1.16
PRPF40A-205ENST00000467114 KBTBD4Q9NVX7 518 aa7.82□□□□□ -1.16
PRPF40A-205ENST00000467114 EBF1Q9UH73 591 aa7.82□□□□□ -1.16
PRPF40A-205ENST00000467114 TCAF2A6NFQ2 919 aa7.81□□□□□ -1.16
PRPF40A-205ENST00000467114 SLC22A31A6NKX4 558 aa7.81□□□□□ -1.16
PRPF40A-205ENST00000467114 GREM1O60565 184 aa7.81□□□□□ -1.16
PRPF40A-205ENST00000467114 DUSP4Q13115 394 aa7.81□□□□□ -1.16
PRPF40A-205ENST00000467114 MLECQ14165 292 aa7.81□□□□□ -1.16
PRPF40A-205ENST00000467114 SNX17Q15036 470 aa7.81□□□□□ -1.16
PRPF40A-205ENST00000467114 FBXL19Q6PCT2 694 aa7.81□□□□□ -1.16
PRPF40A-205ENST00000467114 KCNN1Q92952 543 aa7.81□□□□□ -1.16
PRPF40A-205ENST00000467114 SMG5Q9UPR3 1016 aaKnown RBP7.81□□□□□ -1.16
PRPF40A-205ENST00000467114 YBX2Q9Y2T7 364 aaKnown RBP7.81□□□□□ -1.16
PRPF40A-205ENST00000467114 ATE1O95260 518 aa7.8□□□□□ -1.16
PRPF40A-205ENST00000467114 GBP1P32455 592 aa7.8□□□□□ -1.16
PRPF40A-205ENST00000467114 CLEC16AQ2KHT3 1053 aa7.8□□□□□ -1.16
PRPF40A-205ENST00000467114 CWF19L2Q2TBE0 894 aaKnown RBP7.8□□□□□ -1.16
PRPF40A-205ENST00000467114 ANKS4BQ8N8V4 417 aa7.8□□□□□ -1.16
PRPF40A-205ENST00000467114 SYTL5Q8TDW5 730 aaPredicted RBP7.8□□□□□ -1.16
PRPF40A-205ENST00000467114 G6PC3Q9BUM1 346 aa7.8□□□□□ -1.16
PRPF40A-205ENST00000467114 COPRSQ9NQ92 184 aa7.8□□□□□ -1.16
PRPF40A-205ENST00000467114 KRTAP9-7A8MTY7 169 aa7.79□□□□□ -1.16
PRPF40A-205ENST00000467114 PEX10O60683 326 aa7.79□□□□□ -1.16
PRPF40A-205ENST00000467114 UBOX5O94941 541 aa7.79□□□□□ -1.16
PRPF40A-205ENST00000467114 RNF4P78317 190 aa7.79□□□□□ -1.16
PRPF40A-205ENST00000467114 NMIQ13287 307 aaPredicted RBP7.79□□□□□ -1.16
PRPF40A-205ENST00000467114 SHISA4Q96DD7 197 aa7.79□□□□□ -1.16
PRPF40A-205ENST00000467114 INTS4Q96HW7 963 aaKnown RBP7.79□□□□□ -1.16
PRPF40A-205ENST00000467114 HDAC8Q9BY41 377 aa7.79□□□□□ -1.16
PRPF40A-205ENST00000467114 MCOLN1Q9GZU1 580 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms