RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 PDE4BQ07343 736 aa7.91□□□□□ -1.14
XRN1-206ENST00000467077 ZXDCQ2QGD7 858 aaPredicted RBP7.91□□□□□ -1.14
XRN1-206ENST00000467077 OLFML2BQ68BL8 750 aa7.91□□□□□ -1.14
XRN1-206ENST00000467077 TTBK2Q6IQ55 1244 aa7.91□□□□□ -1.14
XRN1-206ENST00000467077 DNAJB8Q8NHS0 232 aa7.91□□□□□ -1.14
XRN1-206ENST00000467077 PANK1Q8TE04 598 aa7.91□□□□□ -1.14
XRN1-206ENST00000467077 TEPSINQ96N21 525 aa7.91□□□□□ -1.14
XRN1-206ENST00000467077 HRKO00198 91 aa7.9□□□□□ -1.14
XRN1-206ENST00000467077 GALK1P51570 392 aa7.9□□□□□ -1.14
XRN1-206ENST00000467077 SV2BQ7L1I2 683 aa7.9□□□□□ -1.14
XRN1-206ENST00000467077 TXNDC2Q86VQ3 553 aa7.9□□□□□ -1.14
XRN1-206ENST00000467077 TTF2Q9UNY4 1162 aaKnown RBP7.9□□□□□ -1.14
XRN1-206ENST00000467077 CEP131Q9UPN4 1083 aa7.9□□□□□ -1.14
XRN1-206ENST00000467077 TREHO43280 583 aa7.89□□□□□ -1.15
XRN1-206ENST00000467077 SIRT2Q8IXJ6 389 aa7.89□□□□□ -1.15
XRN1-206ENST00000467077 OSBPL7Q9BZF2 842 aa7.89□□□□□ -1.15
XRN1-206ENST00000467077 BIN2Q9UBW5 565 aaPredicted RBP7.89□□□□□ -1.15
XRN1-206ENST00000467077 SPG7Q9UQ90 795 aa7.89□□□□□ -1.15
XRN1-206ENST00000467077 ZC3H12DA2A288 527 aaKnown RBP7.88□□□□□ -1.15
XRN1-206ENST00000467077 N4BP3O15049 544 aa7.88□□□□□ -1.15
XRN1-206ENST00000467077 DSC3Q14574 896 aa7.88□□□□□ -1.15
XRN1-206ENST00000467077 FAM8A1Q9UBU6 413 aa7.88□□□□□ -1.15
XRN1-206ENST00000467077 MAPK8P45983 427 aa7.87□□□□□ -1.15
XRN1-206ENST00000467077 EPHB3P54753 998 aa7.87□□□□□ -1.15
XRN1-206ENST00000467077 PLP2Q04941 152 aa7.87□□□□□ -1.15
XRN1-206ENST00000467077 SEPT6Q14141 434 aa7.87□□□□□ -1.15
XRN1-206ENST00000467077 ADAM7Q9H2U9 754 aa7.87□□□□□ -1.15
XRN1-206ENST00000467077 LUC7LQ9NQ29 371 aaKnown RBP7.87□□□□□ -1.15
XRN1-206ENST00000467077 GFRA2O00451 464 aa7.86□□□□□ -1.15
XRN1-206ENST00000467077 USP17L7P0C7H9 530 aa7.86□□□□□ -1.15
XRN1-206ENST00000467077 MAPK1P28482 360 aa7.86□□□□□ -1.15
XRN1-206ENST00000467077 CLEC16AQ2KHT3 1053 aa7.86□□□□□ -1.15
XRN1-206ENST00000467077 VMACQ2NL98 169 aa7.86□□□□□ -1.15
XRN1-206ENST00000467077 ALG1LQ6GMV1 187 aa7.86□□□□□ -1.15
XRN1-206ENST00000467077 MCATQ8IVS2 390 aaKnown RBP7.86□□□□□ -1.15
XRN1-206ENST00000467077 CYB5D2Q8WUJ1 264 aa7.86□□□□□ -1.15
XRN1-206ENST00000467077 SHISA4Q96DD7 197 aa7.86□□□□□ -1.15
XRN1-206ENST00000467077 BDH2Q9BUT1 245 aa7.86□□□□□ -1.15
XRN1-206ENST00000467077 C12orf49Q9H741 205 aa7.86□□□□□ -1.15
XRN1-206ENST00000467077 ATP2B2Q01814 1243 aa7.85□□□□□ -1.15
XRN1-206ENST00000467077 TEKQ02763 1124 aa7.85□□□□□ -1.15
XRN1-206ENST00000467077 EFEMP1Q12805 493 aa7.85□□□□□ -1.15
XRN1-206ENST00000467077 SLC14A2Q15849 920 aa7.85□□□□□ -1.15
XRN1-206ENST00000467077 CNKSR3Q6P9H4 555 aa7.85□□□□□ -1.15
XRN1-206ENST00000467077 NLRX1Q86UT6 975 aa7.85□□□□□ -1.15
XRN1-206ENST00000467077 SYT8Q8NBV8 401 aa7.85□□□□□ -1.15
XRN1-206ENST00000467077 RNF141Q8WVD5 230 aa7.85□□□□□ -1.15
XRN1-206ENST00000467077 ADAM30Q9UKF2 790 aa7.85□□□□□ -1.15
XRN1-206ENST00000467077 VIPR1P32241 457 aa7.84□□□□□ -1.15
XRN1-206ENST00000467077 RPS26P62854 115 aaKnown RBP7.84□□□□□ -1.15
XRN1-206ENST00000467077 PUM1Q14671 1186 aaKnown RBP eCLIP7.84□□□□□ -1.15
XRN1-206ENST00000467077 DIEXFQ68CQ4 756 aaKnown RBP7.84□□□□□ -1.15
XRN1-206ENST00000467077 SOWAHDA6NJG2 315 aa7.83□□□□□ -1.16
XRN1-206ENST00000467077 USP2O75604 605 aaPredicted RBP7.83□□□□□ -1.16
XRN1-206ENST00000467077 FRMD5Q7Z6J6 570 aa7.83□□□□□ -1.16
XRN1-206ENST00000467077 LINC01599Q8WXQ3 324 aa7.83□□□□□ -1.16
XRN1-206ENST00000467077 ACSF2Q96CM8 615 aaPredicted RBP7.83□□□□□ -1.16
XRN1-206ENST00000467077 MIR1-1HGQ9H1L0 117 aa7.83□□□□□ -1.16
XRN1-206ENST00000467077 CRTAC1Q9NQ79 661 aa7.83□□□□□ -1.16
XRN1-206ENST00000467077 EBF1Q9UH73 591 aa7.83□□□□□ -1.16
XRN1-206ENST00000467077 ZMYM5Q9UJ78 669 aa7.83□□□□□ -1.16
XRN1-206ENST00000467077 ABLIM1O14639 778 aa7.82□□□□□ -1.16
XRN1-206ENST00000467077 IRS4O14654 1257 aaPredicted RBP7.82□□□□□ -1.16
XRN1-206ENST00000467077 INSRRP14616 1297 aa7.82□□□□□ -1.16
XRN1-206ENST00000467077 TNNI2P48788 182 aa7.82□□□□□ -1.16
XRN1-206ENST00000467077 FAM13CQ8NE31 585 aa7.82□□□□□ -1.16
XRN1-206ENST00000467077 CNTD2Q9H8S5 307 aa7.82□□□□□ -1.16
XRN1-206ENST00000467077 PALD1Q9ULE6 856 aa7.82□□□□□ -1.16
XRN1-206ENST00000467077 PCDHB5Q9Y5E4 795 aa7.82□□□□□ -1.16
XRN1-206ENST00000467077 CILPO75339 1184 aa7.81□□□□□ -1.16
XRN1-206ENST00000467077 YARSP54577 528 aaKnown RBP7.81□□□□□ -1.16
XRN1-206ENST00000467077 LINC01356Q8N9X3 169 aa7.81□□□□□ -1.16
XRN1-206ENST00000467077 MZB1Q8WU39 189 aa7.81□□□□□ -1.16
XRN1-206ENST00000467077 GPR20Q99678 358 aa7.81□□□□□ -1.16
XRN1-206ENST00000467077 KRTAP9-8Q9BYQ0 159 aa7.81□□□□□ -1.16
XRN1-206ENST00000467077 ASCC2Q9H1I8 757 aaPredicted RBP7.81□□□□□ -1.16
XRN1-206ENST00000467077 RBM47A0AV96 593 aaKnown RBP7.8□□□□□ -1.16
XRN1-206ENST00000467077 NRDCO43847 1150 aa7.8□□□□□ -1.16
XRN1-206ENST00000467077 RPL10P27635 214 aaKnown RBP7.8□□□□□ -1.16
XRN1-206ENST00000467077 CCDC85BQ15834 202 aaPredicted RBP7.8□□□□□ -1.16
XRN1-206ENST00000467077 CEP128Q6ZU80 1094 aa7.8□□□□□ -1.16
XRN1-206ENST00000467077 FAM129CQ86XR2 697 aa7.8□□□□□ -1.16
XRN1-206ENST00000467077 ASPNQ9BXN1 380 aa7.8□□□□□ -1.16
XRN1-206ENST00000467077 EPB41L4AQ9HCS5 686 aaPredicted RBP7.8□□□□□ -1.16
XRN1-206ENST00000467077 MYRFQ9Y2G1 1151 aa7.8□□□□□ -1.16
XRN1-206ENST00000467077 LRRN2O75325 713 aa7.79□□□□□ -1.16
XRN1-206ENST00000467077 KIR2DL1P43626 348 aaPredicted RBP7.79□□□□□ -1.16
XRN1-206ENST00000467077 KIR2DL2P43627 348 aaPredicted RBP7.79□□□□□ -1.16
XRN1-206ENST00000467077 CDR1P51861 262 aa7.79□□□□□ -1.16
XRN1-206ENST00000467077 CHMP4BP1P59074 171 aa7.79□□□□□ -1.16
XRN1-206ENST00000467077 WAPLQ7Z5K2 1190 aa7.79□□□□□ -1.16
XRN1-206ENST00000467077 SETDB2Q96T68 719 aa7.79□□□□□ -1.16
XRN1-206ENST00000467077 G6PC3Q9BUM1 346 aa7.79□□□□□ -1.16
XRN1-206ENST00000467077 PLCG1P19174 1290 aa7.78□□□□□ -1.16
XRN1-206ENST00000467077 RPL6Q02878 288 aaKnown RBP7.78□□□□□ -1.16
XRN1-206ENST00000467077 TMEM62Q0P6H9 643 aa7.78□□□□□ -1.16
XRN1-206ENST00000467077 TSNAXIP1Q2TAA8 658 aa7.78□□□□□ -1.16
XRN1-206ENST00000467077 RNF111Q6ZNA4 994 aa7.78□□□□□ -1.16
XRN1-206ENST00000467077 PWWP2AQ96N64 755 aa7.78□□□□□ -1.16
XRN1-206ENST00000467077 SSU72P8A0A1W2PR75 194 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms