RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 ZNF792Q3KQV3 632 aa7.23□□□□□ -1.25
LRCH3-212ENST00000466845 SLC23A3Q6PIS1 610 aa7.23□□□□□ -1.25
LRCH3-212ENST00000466845 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.23□□□□□ -1.25
LRCH3-212ENST00000466845 ATG4DQ86TL0 474 aaPredicted RBP7.23□□□□□ -1.25
LRCH3-212ENST00000466845 PHC3Q8NDX5 983 aa7.23□□□□□ -1.25
LRCH3-212ENST00000466845 RNF19AQ9NV58 838 aa7.23□□□□□ -1.25
LRCH3-212ENST00000466845 VTI1BQ9UEU0 232 aa7.23□□□□□ -1.25
LRCH3-212ENST00000466845 TPX2Q9ULW0 747 aaKnown RBP7.23□□□□□ -1.25
LRCH3-212ENST00000466845 RSF1Q96T23 1441 aaPredicted RBP7.22□□□□□ -1.25
LRCH3-212ENST00000466845 PGRP06401 933 aa7.22□□□□□ -1.25
LRCH3-212ENST00000466845 ITIH2P19823 946 aa7.22□□□□□ -1.25
LRCH3-212ENST00000466845 RHBDL3P58872 404 aa7.22□□□□□ -1.25
LRCH3-212ENST00000466845 MAP3K11Q16584 847 aa7.22□□□□□ -1.25
LRCH3-212ENST00000466845 LETMD1Q6P1Q0 360 aa7.22□□□□□ -1.25
LRCH3-212ENST00000466845 UBE3DQ7Z6J8 389 aa7.22□□□□□ -1.25
LRCH3-212ENST00000466845 WFDC3Q8IUB2 231 aa7.22□□□□□ -1.25
LRCH3-212ENST00000466845 MCATQ8IVS2 390 aaKnown RBP7.22□□□□□ -1.25
LRCH3-212ENST00000466845 SPACA3Q8IXA5 215 aa7.22□□□□□ -1.25
LRCH3-212ENST00000466845 MIPEPQ99797 713 aa7.22□□□□□ -1.25
LRCH3-212ENST00000466845 FBRSQ9HAH7 460 aa7.22□□□□□ -1.25
LRCH3-212ENST00000466845 FAM155AB1AL88 458 aaPredicted RBP7.21□□□□□ -1.26
LRCH3-212ENST00000466845 EPB41L2O43491 1005 aaKnown RBP7.21□□□□□ -1.26
LRCH3-212ENST00000466845 ETV3P41162 512 aa7.21□□□□□ -1.26
LRCH3-212ENST00000466845 CAMK2GQ13555 558 aaPredicted RBP7.21□□□□□ -1.26
LRCH3-212ENST00000466845 NKPD1Q17RQ9 610 aa7.21□□□□□ -1.26
LRCH3-212ENST00000466845 ZNF574Q6ZN55 896 aaPredicted RBP7.21□□□□□ -1.26
LRCH3-212ENST00000466845 THAP5Q7Z6K1 395 aa7.21□□□□□ -1.26
LRCH3-212ENST00000466845 CCDC120Q96HB5 630 aa7.21□□□□□ -1.26
LRCH3-212ENST00000466845 TMEM74Q96NL1 305 aa7.21□□□□□ -1.26
LRCH3-212ENST00000466845 ROBO2Q9HCK4 1378 aa7.2□□□□□ -1.26
LRCH3-212ENST00000466845 MRC2Q9UBG0 1479 aa7.2□□□□□ -1.26
LRCH3-212ENST00000466845 CEP164Q9UPV0 1460 aa7.2□□□□□ -1.26
LRCH3-212ENST00000466845 CILPO75339 1184 aa7.2□□□□□ -1.26
LRCH3-212ENST00000466845 NKG7Q16617 165 aa7.2□□□□□ -1.26
LRCH3-212ENST00000466845 TMEM201Q5SNT2 666 aa7.2□□□□□ -1.26
LRCH3-212ENST00000466845 PRAMEF13Q5VWM6 474 aa7.2□□□□□ -1.26
LRCH3-212ENST00000466845 MFSD4AQ8N468 514 aa7.2□□□□□ -1.26
LRCH3-212ENST00000466845 CXorf38Q8TB03 319 aa7.2□□□□□ -1.26
LRCH3-212ENST00000466845 PIWIL2Q8TC59 973 aaKnown RBP7.2□□□□□ -1.26
LRCH3-212ENST00000466845 GATAD2BQ8WXI9 593 aa7.2□□□□□ -1.26
LRCH3-212ENST00000466845 JARID2Q92833 1246 aaPredicted RBP7.2□□□□□ -1.26
LRCH3-212ENST00000466845 MKL1Q969V6 931 aa7.2□□□□□ -1.26
LRCH3-212ENST00000466845 TRIM44Q96DX7 344 aaPredicted RBP7.2□□□□□ -1.26
LRCH3-212ENST00000466845 TMEM87BQ96K49 555 aa7.2□□□□□ -1.26
LRCH3-212ENST00000466845 GOLGA2P5Q9HBQ8 144 aa7.2□□□□□ -1.26
LRCH3-212ENST00000466845 NUB1Q9Y5A7 615 aa7.2□□□□□ -1.26
LRCH3-212ENST00000466845 SBNO2Q9Y2G9 1366 aa7.2□□□□□ -1.26
LRCH3-212ENST00000466845 GOLIM4O00461 696 aa7.19□□□□□ -1.26
LRCH3-212ENST00000466845 POLD1P28340 1107 aa7.19□□□□□ -1.26
LRCH3-212ENST00000466845 YARSP54577 528 aaKnown RBP7.19□□□□□ -1.26
LRCH3-212ENST00000466845 ZC3H6P61129 1189 aaKnown RBP7.19□□□□□ -1.26
LRCH3-212ENST00000466845 ZNF280DQ6N043 979 aa7.19□□□□□ -1.26
LRCH3-212ENST00000466845 DPH6Q7L8W6 267 aa7.19□□□□□ -1.26
LRCH3-212ENST00000466845 FAM161BQ96MY7 647 aa7.19□□□□□ -1.26
LRCH3-212ENST00000466845 BCL2L13Q9BXK5 485 aa7.19□□□□□ -1.26
LRCH3-212ENST00000466845 KRTAP9-2Q9BYQ4 174 aa7.19□□□□□ -1.26
LRCH3-212ENST00000466845 RC3H2Q9HBD1 1191 aaKnown RBP7.19□□□□□ -1.26
LRCH3-212ENST00000466845 JADE2Q9NQC1 790 aa7.19□□□□□ -1.26
LRCH3-212ENST00000466845 TJP2Q9UDY2 1190 aa7.19□□□□□ -1.26
LRCH3-212ENST00000466845 TLR6Q9Y2C9 796 aa7.19□□□□□ -1.26
LRCH3-212ENST00000466845 U3KQE9 123 aa7.19□□□□□ -1.26
LRCH3-212ENST00000466845 PITPNM2Q9BZ72 1349 aa7.19□□□□□ -1.26
LRCH3-212ENST00000466845 PRR36Q9H6K5 1346 aa7.19□□□□□ -1.26
LRCH3-212ENST00000466845 FAM221AA4D161 298 aa7.18□□□□□ -1.26
LRCH3-212ENST00000466845 U2SURPO15042 1029 aaKnown RBP7.18□□□□□ -1.26
LRCH3-212ENST00000466845 GBP2P32456 591 aaPredicted RBP7.18□□□□□ -1.26
LRCH3-212ENST00000466845 CDK8P49336 464 aa7.18□□□□□ -1.26
LRCH3-212ENST00000466845 IKZF1Q13422 519 aa7.18□□□□□ -1.26
LRCH3-212ENST00000466845 OTUD6BQ8N6M0 293 aa7.18□□□□□ -1.26
LRCH3-212ENST00000466845 RHOVQ96L33 236 aa7.18□□□□□ -1.26
LRCH3-212ENST00000466845 MBNL3Q9NUK0 354 aaKnown RBP7.18□□□□□ -1.26
LRCH3-212ENST00000466845 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.18□□□□□ -1.26
LRCH3-212ENST00000466845 FAN1Q9Y2M0 1017 aa7.18□□□□□ -1.26
LRCH3-212ENST00000466845 PF4P02776 101 aa7.17□□□□□ -1.26
LRCH3-212ENST00000466845 RNASE1P07998 156 aaKnown RBP7.17□□□□□ -1.26
LRCH3-212ENST00000466845 MLECQ14165 292 aa7.17□□□□□ -1.26
LRCH3-212ENST00000466845 MPP2Q14168 576 aa7.17□□□□□ -1.26
LRCH3-212ENST00000466845 C4orf46Q504U0 113 aa7.17□□□□□ -1.26
LRCH3-212ENST00000466845 EGFL6Q8IUX8 553 aa7.17□□□□□ -1.26
LRCH3-212ENST00000466845 CEP131Q9UPN4 1083 aa7.17□□□□□ -1.26
LRCH3-212ENST00000466845 COMMD10Q9Y6G5 202 aa7.17□□□□□ -1.26
LRCH3-212ENST00000466845 CAPN6Q9Y6Q1 641 aa7.17□□□□□ -1.26
LRCH3-212ENST00000466845 FANCD2Q9BXW9 1451 aa7.17□□□□□ -1.26
LRCH3-212ENST00000466845 WDR62O43379 1518 aa7.17□□□□□ -1.26
LRCH3-212ENST00000466845 GOLGA6CA6NDK9 693 aa7.16□□□□□ -1.26
LRCH3-212ENST00000466845 GOLGA6BA6NDN3 693 aa7.16□□□□□ -1.26
LRCH3-212ENST00000466845 ZNF500O60304 480 aaPredicted RBP7.16□□□□□ -1.26
LRCH3-212ENST00000466845 ZRANB2O95218 330 aaKnown RBP eCLIP7.16□□□□□ -1.26
LRCH3-212ENST00000466845 GOLGA6DP0CG33 693 aa7.16□□□□□ -1.26
LRCH3-212ENST00000466845 YBX3P16989 372 aaKnown RBP eCLIP7.16□□□□□ -1.26
LRCH3-212ENST00000466845 PLCG1P19174 1290 aa7.16□□□□□ -1.26
LRCH3-212ENST00000466845 BDNFP23560 247 aa7.16□□□□□ -1.26
LRCH3-212ENST00000466845 GYS2P54840 703 aa7.16□□□□□ -1.26
LRCH3-212ENST00000466845 ZP2Q05996 745 aa7.16□□□□□ -1.26
LRCH3-212ENST00000466845 SF3A1Q15459 793 aaKnown RBP7.16□□□□□ -1.26
LRCH3-212ENST00000466845 NBPF9Q3BBW0 867 aa7.16□□□□□ -1.26
LRCH3-212ENST00000466845 NAALADL2Q58DX5 795 aa7.16□□□□□ -1.26
LRCH3-212ENST00000466845 AMOTL1Q8IY63 956 aa7.16□□□□□ -1.26
LRCH3-212ENST00000466845 FLAD1Q8NFF5 587 aa7.16□□□□□ -1.26
LRCH3-212ENST00000466845 TMEM40Q8WWA1 233 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms