RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 USP5P45974 858 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 PLCD1P51178 756 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 GRIK5Q16478 980 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 ELOA2Q8IYF1 753 aaPredicted RBP11.85□□□□□ -0.51
UFD1-206ENST00000466373 STAG2Q8N3U4 1231 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 TNFRSF25Q93038 417 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 BAG1Q99933 345 aaPredicted RBP11.85□□□□□ -0.51
UFD1-206ENST00000466373 DESI2Q9BSY9 194 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 ATP8A2Q9NTI2 1148 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 A0A1B0GUL6 1792 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 COL5A3P25940 1745 aaPredicted RBP11.85□□□□□ -0.51
UFD1-206ENST00000466373 USP17L3A6NCW0 530 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 USP17L4A6NCW7 530 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 ETF1P62495 437 aaKnown RBP11.85□□□□□ -0.51
UFD1-206ENST00000466373 SYCP1Q15431 976 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 KMT5BQ4FZB7 885 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 RCSD1Q6JBY9 416 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 USP17L1Q7RTZ2 530 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 SLC44A5Q8NCS7 719 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 ANKRD2Q9GZV1 360 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 CGNQ9P2M7 1197 aaKnown RBP11.85□□□□□ -0.51
UFD1-206ENST00000466373 CCNL1Q9UK58 526 aaPredicted RBP11.85□□□□□ -0.51
UFD1-206ENST00000466373 SEMA3EO15041 775 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 ORC4O43929 436 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 NFIXQ14938 502 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 TOGARAM2Q6ZUX3 1019 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 TMEM139Q8IV31 216 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 REXO1L1PQ8IX06 675 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 TC2NQ8N9U0 490 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 SPATA20Q8TB22 786 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 ARHGEF1Q92888 912 aaKnown RBP11.85□□□□□ -0.51
UFD1-206ENST00000466373 FERMT2Q96AC1 680 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 ERO1AQ96HE7 468 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 KAT14Q9H8E8 782 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 SCN7AQ01118 1682 aa11.85□□□□□ -0.51
UFD1-206ENST00000466373 IGSF3O75054 1194 aa11.84□□□□□ -0.51
UFD1-206ENST00000466373 RPS6KA4O75676 772 aa11.84□□□□□ -0.51
UFD1-206ENST00000466373 TM4SF1P30408 202 aa11.84□□□□□ -0.51
UFD1-206ENST00000466373 IL17AQ16552 155 aa11.84□□□□□ -0.51
UFD1-206ENST00000466373 FBXO38Q6PIJ6 1188 aa11.84□□□□□ -0.51
UFD1-206ENST00000466373 RASGRP2Q7LDG7 609 aa11.84□□□□□ -0.51
UFD1-206ENST00000466373 TRIML1Q8N9V2 468 aa11.84□□□□□ -0.51
UFD1-206ENST00000466373 SH3RF3Q8TEJ3 882 aaPredicted RBP11.84□□□□□ -0.51
UFD1-206ENST00000466373 CNTNAP4Q9C0A0 1308 aa11.84□□□□□ -0.51
UFD1-206ENST00000466373 IL17RBQ9NRM6 502 aa11.84□□□□□ -0.51
UFD1-206ENST00000466373 ARPP21Q9UBL0 812 aaPredicted RBP11.84□□□□□ -0.51
UFD1-206ENST00000466373 SAP30BPQ9UHR5 308 aaKnown RBP11.84□□□□□ -0.51
UFD1-206ENST00000466373 MAPK8IP1Q9UQF2 711 aa11.84□□□□□ -0.51
UFD1-206ENST00000466373 PPP2R2CQ9Y2T4 447 aa11.84□□□□□ -0.51
UFD1-206ENST00000466373 RTCBQ9Y3I0 505 aaKnown RBP11.84□□□□□ -0.51
UFD1-206ENST00000466373 SYNRGQ9UMZ2 1314 aa11.84□□□□□ -0.51
UFD1-206ENST00000466373 URI1O94763 535 aaPredicted RBP11.84□□□□□ -0.51
UFD1-206ENST00000466373 PCP11498 1178 aaKnown RBP11.84□□□□□ -0.51
UFD1-206ENST00000466373 KCNJ6P48051 423 aa11.84□□□□□ -0.51
UFD1-206ENST00000466373 ATP2C1P98194 919 aaPredicted RBP11.84□□□□□ -0.51
UFD1-206ENST00000466373 MTF1Q14872 753 aa11.84□□□□□ -0.51
UFD1-206ENST00000466373 TRIM65Q6PJ69 517 aa11.84□□□□□ -0.51
UFD1-206ENST00000466373 CCDC34Q96HJ3 373 aa11.84□□□□□ -0.51
UFD1-206ENST00000466373 CPVLQ9H3G5 476 aa11.84□□□□□ -0.51
UFD1-206ENST00000466373 MKNK2Q9HBH9 465 aa11.84□□□□□ -0.51
UFD1-206ENST00000466373 STX8Q9UNK0 236 aa11.84□□□□□ -0.51
UFD1-206ENST00000466373 DPYDQ12882 1025 aa11.83□□□□□ -0.52
UFD1-206ENST00000466373 TBX2Q13207 712 aaPredicted RBP11.83□□□□□ -0.52
UFD1-206ENST00000466373 DHX8Q14562 1220 aaKnown RBP11.83□□□□□ -0.52
UFD1-206ENST00000466373 PFKFB3Q16875 520 aaPredicted RBP11.83□□□□□ -0.52
UFD1-206ENST00000466373 PNMA1Q8ND90 353 aa11.83□□□□□ -0.52
UFD1-206ENST00000466373 TGFBRAP1Q8WUH2 860 aa11.83□□□□□ -0.52
UFD1-206ENST00000466373 FAM205AQ6ZU69 1335 aa11.83□□□□□ -0.52
UFD1-206ENST00000466373 ARHGAP6O43182 974 aa11.83□□□□□ -0.52
UFD1-206ENST00000466373 MYO1BO43795 1136 aa11.83□□□□□ -0.52
UFD1-206ENST00000466373 LDHBP07195 334 aaKnown RBP11.83□□□□□ -0.52
UFD1-206ENST00000466373 CUL4BQ13620 913 aa11.83□□□□□ -0.52
UFD1-206ENST00000466373 NR1I3Q14994 352 aa11.83□□□□□ -0.52
UFD1-206ENST00000466373 TYW1BQ6NUM6 668 aa11.83□□□□□ -0.52
UFD1-206ENST00000466373 SH3RF1Q7Z6J0 888 aa11.83□□□□□ -0.52
UFD1-206ENST00000466373 L2HGDHQ9H9P8 463 aa11.83□□□□□ -0.52
UFD1-206ENST00000466373 CTNND2Q9UQB3 1225 aa11.83□□□□□ -0.52
UFD1-206ENST00000466373 XDHP47989 1333 aa11.83□□□□□ -0.52
UFD1-206ENST00000466373 GOLGA8HP0CJ92 632 aa11.83□□□□□ -0.52
UFD1-206ENST00000466373 ERCC5P28715 1186 aaPredicted RBP11.83□□□□□ -0.52
UFD1-206ENST00000466373 CCT6AP40227 531 aaKnown RBP11.83□□□□□ -0.52
UFD1-206ENST00000466373 PLIN2Q99541 437 aa11.83□□□□□ -0.52
UFD1-206ENST00000466373 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.83□□□□□ -0.528e-13■□□□□ 9.6
UFD1-206ENST00000466373 GNG11P61952 73 aa11.82□□□□□ -0.52
UFD1-206ENST00000466373 KARSQ15046 597 aaKnown RBP11.82□□□□□ -0.52
UFD1-206ENST00000466373 MAPKAPK5Q8IW41 473 aa11.82□□□□□ -0.52
UFD1-206ENST00000466373 MTRQ99707 1265 aa11.82□□□□□ -0.52
UFD1-206ENST00000466373 SOWAHDA6NJG2 315 aa11.82□□□□□ -0.52
UFD1-206ENST00000466373 PPP1R3GB7ZBB8 358 aa11.82□□□□□ -0.52
UFD1-206ENST00000466373 CCP110O43303 1012 aa11.82□□□□□ -0.52
UFD1-206ENST00000466373 ZSCAN12O43309 604 aa11.82□□□□□ -0.52
UFD1-206ENST00000466373 BMP15O95972 392 aa11.82□□□□□ -0.52
UFD1-206ENST00000466373 TSPY3P0CV98 308 aa11.82□□□□□ -0.52
UFD1-206ENST00000466373 TSPY8P0CW00 308 aa11.82□□□□□ -0.52
UFD1-206ENST00000466373 KIF5BP33176 963 aa11.82□□□□□ -0.52
UFD1-206ENST00000466373 RFC4P35249 363 aa11.82□□□□□ -0.52
UFD1-206ENST00000466373 CCDC93Q567U6 631 aa11.82□□□□□ -0.52
UFD1-206ENST00000466373 SPATA1Q5VX52 437 aa11.82□□□□□ -0.52
UFD1-206ENST00000466373 IQUBQ8NA54 791 aa11.82□□□□□ -0.52
UFD1-206ENST00000466373 ZNF397Q8NF99 534 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms