RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 PDE6BP35913 854 aa4.32□□□□□ -1.72
CCDC93-205ENST00000466171 CLEC16AQ2KHT3 1053 aa4.32□□□□□ -1.72
CCDC93-205ENST00000466171 ZNF385BQ569K4 471 aa4.32□□□□□ -1.72
CCDC93-205ENST00000466171 ZNF605Q86T29 641 aa4.32□□□□□ -1.72
CCDC93-205ENST00000466171 CCDC84Q86UT8 332 aaPredicted RBP4.32□□□□□ -1.72
CCDC93-205ENST00000466171 ANKS4BQ8N8V4 417 aa4.32□□□□□ -1.72
CCDC93-205ENST00000466171 INTS4Q96HW7 963 aaKnown RBP4.32□□□□□ -1.72
CCDC93-205ENST00000466171 ASCC2Q9H1I8 757 aaPredicted RBP4.32□□□□□ -1.72
CCDC93-205ENST00000466171 C19orf44Q9H6X5 657 aa4.32□□□□□ -1.72
CCDC93-205ENST00000466171 GPR160Q9UJ42 338 aa4.32□□□□□ -1.72
CCDC93-205ENST00000466171 CNOT6Q9ULM6 557 aaKnown RBP4.32□□□□□ -1.72
CCDC93-205ENST00000466171 TFE3P19532 575 aaPredicted RBP4.31□□□□□ -1.72
CCDC93-205ENST00000466171 DLG4P78352 724 aa4.31□□□□□ -1.72
CCDC93-205ENST00000466171 EAPPQ56P03 285 aaPredicted RBP4.31□□□□□ -1.72
CCDC93-205ENST00000466171 TMEM151BQ8IW70 566 aa4.31□□□□□ -1.72
CCDC93-205ENST00000466171 BAHD1Q8TBE0 780 aaPredicted RBP4.31□□□□□ -1.72
CCDC93-205ENST00000466171 NOC4LQ9BVI4 516 aaKnown RBP4.31□□□□□ -1.72
CCDC93-205ENST00000466171 MCOLN1Q9GZU1 580 aa4.31□□□□□ -1.72
CCDC93-205ENST00000466171 ZCCHC4Q9H5U6 513 aa4.31□□□□□ -1.72
CCDC93-205ENST00000466171 YBX2Q9Y2T7 364 aaKnown RBP4.31□□□□□ -1.72
CCDC93-205ENST00000466171 PCDHA11Q9Y5I1 949 aa4.31□□□□□ -1.72
CCDC93-205ENST00000466171 TEX51A0A1B0GUA7 166 aa4.3□□□□□ -1.72
CCDC93-205ENST00000466171 TAF1CQ15572 869 aaPredicted RBP4.3□□□□□ -1.72
CCDC93-205ENST00000466171 TMEM201Q5SNT2 666 aa4.3□□□□□ -1.72
CCDC93-205ENST00000466171 TCERG1LQ5VWI1 586 aa4.3□□□□□ -1.72
CCDC93-205ENST00000466171 PPP1R13LQ8WUF5 828 aa4.3□□□□□ -1.72
CCDC93-205ENST00000466171 CCDC74BQ96LY2 380 aa4.3□□□□□ -1.72
CCDC93-205ENST00000466171 DUSP9Q99956 384 aaKnown RBP4.3□□□□□ -1.72
CCDC93-205ENST00000466171 ASPNQ9BXN1 380 aa4.3□□□□□ -1.72
CCDC93-205ENST00000466171 SSU72P8A0A1W2PR75 194 aa4.29□□□□□ -1.72
CCDC93-205ENST00000466171 OR14I1A6ND48 311 aa4.29□□□□□ -1.72
CCDC93-205ENST00000466171 UPK3BL1B0FP48 263 aa4.29□□□□□ -1.72
CCDC93-205ENST00000466171 UPK3BL2E5RIL1 263 aa4.29□□□□□ -1.72
CCDC93-205ENST00000466171 BMP7P18075 431 aa4.29□□□□□ -1.72
CCDC93-205ENST00000466171 HOXA5P20719 270 aa4.29□□□□□ -1.72
CCDC93-205ENST00000466171 ST13P50502 369 aaKnown RBP4.29□□□□□ -1.72
CCDC93-205ENST00000466171 PSMD2Q13200 908 aa4.29□□□□□ -1.72
CCDC93-205ENST00000466171 MLECQ14165 292 aa4.29□□□□□ -1.72
CCDC93-205ENST00000466171 SLFN12Q8IYM2 578 aa4.29□□□□□ -1.72
CCDC93-205ENST00000466171 PHACTR4Q8IZ21 702 aa4.29□□□□□ -1.72
CCDC93-205ENST00000466171 RELTQ969Z4 430 aa4.29□□□□□ -1.72
CCDC93-205ENST00000466171 ZNF552Q9H707 407 aaPredicted RBP4.29□□□□□ -1.72
CCDC93-205ENST00000466171 SP110Q9HB58 689 aa4.29□□□□□ -1.72
CCDC93-205ENST00000466171 PARD6AQ9NPB6 346 aa4.29□□□□□ -1.72
CCDC93-205ENST00000466171 TLR6Q9Y2C9 796 aa4.29□□□□□ -1.72
CCDC93-205ENST00000466171 CORINQ9Y5Q5 1042 aa4.29□□□□□ -1.72
CCDC93-205ENST00000466171 MYOCOSA0A1B0GUC4 107 aa4.28□□□□□ -1.72
CCDC93-205ENST00000466171 RBM47A0AV96 593 aaKnown RBP4.28□□□□□ -1.72
CCDC93-205ENST00000466171 GBP1P32455 592 aa4.28□□□□□ -1.72
CCDC93-205ENST00000466171 XPCQ01831 940 aaPredicted RBP4.28□□□□□ -1.72
CCDC93-205ENST00000466171 LMNB2Q03252 620 aa4.28□□□□□ -1.72
CCDC93-205ENST00000466171 SLC14A2Q15849 920 aa4.28□□□□□ -1.72
CCDC93-205ENST00000466171 MEI1Q5TIA1 1274 aa4.28□□□□□ -1.72
CCDC93-205ENST00000466171 OLFML2BQ68BL8 750 aa4.28□□□□□ -1.72
CCDC93-205ENST00000466171 RELL1Q8IUW5 271 aa4.28□□□□□ -1.72
CCDC93-205ENST00000466171 ENOX1Q8TC92 643 aaKnown RBP4.28□□□□□ -1.72
CCDC93-205ENST00000466171 KREMEN1Q96MU8 473 aa4.28□□□□□ -1.72
CCDC93-205ENST00000466171 KLHL3Q9UH77 587 aa4.28□□□□□ -1.72
CCDC93-205ENST00000466171 ZMYM5Q9UJ78 669 aa4.28□□□□□ -1.72
CCDC93-205ENST00000466171 KCTD3Q9Y597 815 aa4.28□□□□□ -1.72
CCDC93-205ENST00000466171 LRRN2O75325 713 aa4.27□□□□□ -1.73
CCDC93-205ENST00000466171 CILPO75339 1184 aa4.27□□□□□ -1.73
CCDC93-205ENST00000466171 RPL10P27635 214 aaKnown RBP4.27□□□□□ -1.73
CCDC93-205ENST00000466171 ITGAEP38570 1179 aa4.27□□□□□ -1.73
CCDC93-205ENST00000466171 KRTAP10-2P60368 255 aa4.27□□□□□ -1.73
CCDC93-205ENST00000466171 RNF4P78317 190 aa4.27□□□□□ -1.73
CCDC93-205ENST00000466171 TEKQ02763 1124 aa4.27□□□□□ -1.73
CCDC93-205ENST00000466171 CAMK2GQ13555 558 aaPredicted RBP4.27□□□□□ -1.73
CCDC93-205ENST00000466171 PWP1Q13610 501 aa4.27□□□□□ -1.73
CCDC93-205ENST00000466171 TIGD5Q53EQ6 642 aa4.27□□□□□ -1.73
CCDC93-205ENST00000466171 ADGRF1Q5T601 910 aa4.27□□□□□ -1.73
CCDC93-205ENST00000466171 ERICH6BQ5W0A0 696 aa4.27□□□□□ -1.73
CCDC93-205ENST00000466171 RNF111Q6ZNA4 994 aa4.27□□□□□ -1.73
CCDC93-205ENST00000466171 PHC3Q8NDX5 983 aa4.27□□□□□ -1.73
CCDC93-205ENST00000466171 GATAD2BQ8WXI9 593 aa4.27□□□□□ -1.73
CCDC93-205ENST00000466171 SIRT5Q9NXA8 310 aa4.27□□□□□ -1.73
CCDC93-205ENST00000466171 REV1Q9UBZ9 1251 aa4.27□□□□□ -1.73
CCDC93-205ENST00000466171 HRKO00198 91 aa4.26□□□□□ -1.73
CCDC93-205ENST00000466171 PSPNO60542 156 aa4.26□□□□□ -1.73
CCDC93-205ENST00000466171 SASH1O94885 1247 aa4.26□□□□□ -1.73
CCDC93-205ENST00000466171 NMIQ13287 307 aaPredicted RBP4.26□□□□□ -1.73
CCDC93-205ENST00000466171 BNC2Q6ZN30 1099 aaPredicted RBP4.26□□□□□ -1.73
CCDC93-205ENST00000466171 C20orf173Q96LM9 149 aa4.26□□□□□ -1.73
CCDC93-205ENST00000466171 CRTAC1Q9NQ79 661 aa4.26□□□□□ -1.73
CCDC93-205ENST00000466171 PARP2Q9UGN5 583 aa4.26□□□□□ -1.73
CCDC93-205ENST00000466171 IRAK3Q9Y616 596 aa4.26□□□□□ -1.73
CCDC93-205ENST00000466171 PRR36Q9H6K5 1346 aa4.25□□□□□ -1.73
CCDC93-205ENST00000466171 FAM221AA4D161 298 aa4.25□□□□□ -1.73
CCDC93-205ENST00000466171 ANKRD33BA6NCL7 494 aa4.25□□□□□ -1.73
CCDC93-205ENST00000466171 CHURC1-FNTBB4DL54 471 aa4.25□□□□□ -1.73
CCDC93-205ENST00000466171 RBAK-RBAKDNI3L0D1 243 aa4.25□□□□□ -1.73
CCDC93-205ENST00000466171 HTR3BO95264 441 aa4.25□□□□□ -1.73
CCDC93-205ENST00000466171 F13A1P00488 732 aa4.25□□□□□ -1.73
CCDC93-205ENST00000466171 PF4P02776 101 aa4.25□□□□□ -1.73
CCDC93-205ENST00000466171 SYN1P17600 705 aa4.25□□□□□ -1.73
CCDC93-205ENST00000466171 GBP2P32456 591 aaPredicted RBP4.25□□□□□ -1.73
CCDC93-205ENST00000466171 KIR2DL1P43626 348 aaPredicted RBP4.25□□□□□ -1.73
CCDC93-205ENST00000466171 KIR2DL2P43627 348 aaPredicted RBP4.25□□□□□ -1.73
CCDC93-205ENST00000466171 PCBP3P57721 371 aaKnown RBP4.25□□□□□ -1.73
CCDC93-205ENST00000466171 SRSF3P84103 164 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms