RNA–Protein interactions for RNA: ENST00000466045.1

CDHR3-203, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-203ENST00000466045 FAM83GA6ND36 823 aa10.6□□□□□ -0.71
CDHR3-203ENST00000466045 STXBP3O00186 592 aa10.6□□□□□ -0.71
CDHR3-203ENST00000466045 CHL1O00533 1208 aa10.6□□□□□ -0.71
CDHR3-203ENST00000466045 CEP104O60308 925 aa10.6□□□□□ -0.71
CDHR3-203ENST00000466045 ANP32DO95626 131 aa10.6□□□□□ -0.71
CDHR3-203ENST00000466045 INF2Q27J81 1249 aa10.6□□□□□ -0.71
CDHR3-203ENST00000466045 CCDC92Q53HC0 331 aaPredicted RBP10.6□□□□□ -0.71
CDHR3-203ENST00000466045 SULT6B1Q6IMI4 303 aa10.6□□□□□ -0.71
CDHR3-203ENST00000466045 KLHDC4Q8TBB5 520 aa10.6□□□□□ -0.71
CDHR3-203ENST00000466045 TEKT4Q8WW24 435 aa10.6□□□□□ -0.71
CDHR3-203ENST00000466045 PCMTD2Q9NV79 361 aa10.6□□□□□ -0.71
CDHR3-203ENST00000466045 NOP53Q9NZM5 478 aaKnown RBP10.6□□□□□ -0.71
CDHR3-203ENST00000466045 KIF1AQ12756 1690 aa10.6□□□□□ -0.71
CDHR3-203ENST00000466045 SPATA31A3Q5VYP0 1347 aa10.6□□□□□ -0.71
CDHR3-203ENST00000466045 PXDNQ92626 1479 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 ARHGEF10O15013 1369 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 GOLGA6L4A6NEF3 574 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 ELL2O00472 640 aaPredicted RBP10.59□□□□□ -0.71
CDHR3-203ENST00000466045 PFKFB2O60825 505 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 HMMRO75330 724 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 IDO1P14902 403 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 PDE6BP35913 854 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 RC3H1Q5TC82 1133 aaKnown RBP10.59□□□□□ -0.71
CDHR3-203ENST00000466045 SYNE3Q6ZMZ3 975 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 RUFY1Q96T51 708 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 MPHOSPH6Q99547 160 aaKnown RBP10.59□□□□□ -0.71
CDHR3-203ENST00000466045 GPCPD1Q9NPB8 672 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 LIMCH1Q9UPQ0 1083 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 SBNO1A3KN83 1393 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 ADCY9O60503 1353 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 CAPN15O75808 1086 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 KRT38O76015 456 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 PARP1P09874 1014 aaKnown RBP10.59□□□□□ -0.71
CDHR3-203ENST00000466045 FAM200BP0CF97 657 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 GHRP10912 638 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 HOXA10P31260 410 aaPredicted RBP10.59□□□□□ -0.71
CDHR3-203ENST00000466045 HSPA4P34932 840 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 ELF3P78545 371 aaPredicted RBP10.59□□□□□ -0.71
CDHR3-203ENST00000466045 RNF187Q5TA31 235 aaPredicted RBP10.59□□□□□ -0.71
CDHR3-203ENST00000466045 CCDC121Q6ZUS5 278 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 NOL8Q76FK4 1167 aaKnown RBP10.59□□□□□ -0.71
CDHR3-203ENST00000466045 ATP11CQ8NB49 1132 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 ZNF473Q8WTR7 871 aaKnown RBP10.59□□□□□ -0.71
CDHR3-203ENST00000466045 CCDC12Q8WUD4 166 aaPredicted RBP10.59□□□□□ -0.71
CDHR3-203ENST00000466045 SPIRE2Q8WWL2 714 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.59□□□□□ -0.71
CDHR3-203ENST00000466045 TRAIPQ9BWF2 469 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 PCDH18Q9HCL0 1135 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 HAUS2Q9NVX0 235 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 NHSL1Q5SYE7 1610 aa10.59□□□□□ -0.71
CDHR3-203ENST00000466045 TARSL2A2RTX5 802 aaKnown RBP10.58□□□□□ -0.72
CDHR3-203ENST00000466045 KIF4AO95239 1232 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 VDRP11473 427 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 ALADP13716 330 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 ANKRD20A8PQ5CZ79 823 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 CMPK2Q5EBM0 449 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 MAIP1Q8WWC4 291 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 IWS1Q96ST2 819 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 GALNT8Q9NY28 637 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 CIDEBQ9UHD4 219 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 BZW2Q9Y6E2 419 aaKnown RBP10.58□□□□□ -0.72
CDHR3-203ENST00000466045 COL16A1Q07092 1604 aaPredicted RBP10.58□□□□□ -0.72
CDHR3-203ENST00000466045 UBN2Q6ZU65 1347 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 LRRD1A4D1F6 860 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 CTAGE15A4D2H0 777 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 CTAGE8P0CG41 777 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 CCDC166P0CW27 439 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 ABL2P42684 1182 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 ADCY1Q08828 1119 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 CTAGE6Q86UF2 777 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 SESTD1Q86VW0 696 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 CTAGE4Q8IX94 777 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 AOPEPQ8N6M6 819 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 ANKRD44Q8N8A2 993 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 RIN2Q8WYP3 895 aaPredicted RBP10.58□□□□□ -0.72
CDHR3-203ENST00000466045 OPTNQ96CV9 577 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 IFNKQ9P0W0 207 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 SWAP70Q9UH65 585 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 C2CD2Q9Y426 696 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 USP54Q70EL1 1684 aa10.58□□□□□ -0.72
CDHR3-203ENST00000466045 STX10O60499 249 aa10.57□□□□□ -0.72
CDHR3-203ENST00000466045 FAM107AO95990 144 aa10.57□□□□□ -0.72
CDHR3-203ENST00000466045 ZFXP17010 805 aaPredicted RBP10.57□□□□□ -0.72
CDHR3-203ENST00000466045 GJB2P29033 226 aa10.57□□□□□ -0.72
CDHR3-203ENST00000466045 STIP1P31948 543 aaKnown RBP10.57□□□□□ -0.72
CDHR3-203ENST00000466045 ENOX2Q16206 610 aaKnown RBP10.57□□□□□ -0.72
CDHR3-203ENST00000466045 CDC37L1Q7L3B6 337 aa10.57□□□□□ -0.72
CDHR3-203ENST00000466045 TMEM110Q86TL2 294 aa10.57□□□□□ -0.72
CDHR3-203ENST00000466045 SLF2Q8IX21 1173 aa10.57□□□□□ -0.72
CDHR3-203ENST00000466045 BHMTQ93088 406 aa10.57□□□□□ -0.72
CDHR3-203ENST00000466045 SPATA32Q96LK8 384 aa10.57□□□□□ -0.72
CDHR3-203ENST00000466045 UPF3BQ9BZI7 483 aaKnown RBP10.57□□□□□ -0.72
CDHR3-203ENST00000466045 MIS18AQ9NYP9 233 aa10.57□□□□□ -0.72
CDHR3-203ENST00000466045 SPATA31A6Q5VVP1 1343 aa10.57□□□□□ -0.72
CDHR3-203ENST00000466045 CRB1P82279 1406 aa10.57□□□□□ -0.72
CDHR3-203ENST00000466045 CACNA1FO60840 1977 aa10.57□□□□□ -0.72
CDHR3-203ENST00000466045 A0A1B0GVL5 298 aa10.57□□□□□ -0.72
CDHR3-203ENST00000466045 PALM3A6NDB9 673 aaPredicted RBP10.57□□□□□ -0.72
CDHR3-203ENST00000466045 NUTM2BA6NNL0 878 aaPredicted RBP10.57□□□□□ -0.72
CDHR3-203ENST00000466045 NUTM2EB1AL46 878 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms