RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 TMCO4Q5TGY1 634 aa9.6□□□□□ -0.87
SSB-207ENST00000465871 MPZL3Q6UWV2 235 aa9.6□□□□□ -0.87
SSB-207ENST00000465871 FAM84AQ96KN4 292 aa9.6□□□□□ -0.87
SSB-207ENST00000465871 SLC38A3Q99624 504 aa9.6□□□□□ -0.87
SSB-207ENST00000465871 GMIPQ9P107 970 aa9.6□□□□□ -0.87
SSB-207ENST00000465871 ADAMTS1Q9UHI8 967 aa9.6□□□□□ -0.87
SSB-207ENST00000465871 SLC22A31A6NKX4 558 aa9.59□□□□□ -0.87
SSB-207ENST00000465871 RGS13O14921 159 aa9.59□□□□□ -0.87
SSB-207ENST00000465871 LTKP29376 864 aa9.59□□□□□ -0.87
SSB-207ENST00000465871 GBP1P32455 592 aa9.59□□□□□ -0.87
SSB-207ENST00000465871 FZD5Q13467 585 aa9.59□□□□□ -0.87
SSB-207ENST00000465871 ZNF124Q15973 351 aa9.59□□□□□ -0.87
SSB-207ENST00000465871 PKN1Q16512 942 aa9.59□□□□□ -0.87
SSB-207ENST00000465871 RBM47A0AV96 593 aaKnown RBP9.58□□□□□ -0.88
SSB-207ENST00000465871 RAG1P15918 1043 aa9.58□□□□□ -0.88
SSB-207ENST00000465871 ZNF16P17020 682 aaPredicted RBP9.58□□□□□ -0.88
SSB-207ENST00000465871 HK2P52789 917 aa9.58□□□□□ -0.88
SSB-207ENST00000465871 CHMP4BP1P59074 171 aa9.58□□□□□ -0.88
SSB-207ENST00000465871 ARSHQ5FYA8 562 aa9.58□□□□□ -0.88
SSB-207ENST00000465871 BHLHE22Q8NFJ8 381 aaPredicted RBP9.58□□□□□ -0.88
SSB-207ENST00000465871 ABHD4Q8TB40 342 aa9.58□□□□□ -0.88
SSB-207ENST00000465871 ADAMTS10Q9H324 1103 aa9.58□□□□□ -0.88
SSB-207ENST00000465871 ZBTB7CA1YPR0 619 aa9.57□□□□□ -0.88
SSB-207ENST00000465871 HPXP02790 462 aa9.57□□□□□ -0.88
SSB-207ENST00000465871 OVOS1Q6IE37 1185 aa9.57□□□□□ -0.88
SSB-207ENST00000465871 VWCEQ96DN2 955 aa9.57□□□□□ -0.88
SSB-207ENST00000465871 EHMT1Q9H9B1 1298 aa9.57□□□□□ -0.88
SSB-207ENST00000465871 UBP1Q9NZI7 540 aa9.57□□□□□ -0.88
SSB-207ENST00000465871 PCDHA11Q9Y5I1 949 aa9.57□□□□□ -0.88
SSB-207ENST00000465871 SHISA3A0PJX4 238 aa9.56□□□□□ -0.88
SSB-207ENST00000465871 UBOX5O94941 541 aa9.56□□□□□ -0.88
SSB-207ENST00000465871 RNF4P78317 190 aa9.56□□□□□ -0.88
SSB-207ENST00000465871 APOBRQ0VD83 1088 aa9.56□□□□□ -0.88
SSB-207ENST00000465871 PRR23BQ6ZRT6 265 aa9.56□□□□□ -0.88
SSB-207ENST00000465871 ERVFC1P60507 584 aa9.55□□□□□ -0.88
SSB-207ENST00000465871 SEZ6Q53EL9 994 aa9.55□□□□□ -0.88
SSB-207ENST00000465871 LDLRAD1Q5T700 205 aa9.55□□□□□ -0.88
SSB-207ENST00000465871 CDCP2Q5VXM1 449 aa9.55□□□□□ -0.88
SSB-207ENST00000465871 MYLIPQ8WY64 445 aa9.55□□□□□ -0.88
SSB-207ENST00000465871 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.55□□□□□ -0.88
SSB-207ENST00000465871 ARID1BQ8NFD5 2236 aaPredicted RBP9.54□□□□□ -0.88
SSB-207ENST00000465871 ZGLP1P0C6A0 271 aa9.54□□□□□ -0.88
SSB-207ENST00000465871 CLEC16AQ2KHT3 1053 aa9.54□□□□□ -0.88
SSB-207ENST00000465871 REXO1Q8N1G1 1221 aaKnown RBP9.54□□□□□ -0.88
SSB-207ENST00000465871 TMEM87AQ8NBN3 555 aa9.54□□□□□ -0.88
SSB-207ENST00000465871 PDZD8Q8NEN9 1154 aa9.54□□□□□ -0.88
SSB-207ENST00000465871 CNNM2Q9H8M5 875 aa9.54□□□□□ -0.88
SSB-207ENST00000465871 DBX1A6NMT0 343 aa9.53□□□□□ -0.88
SSB-207ENST00000465871 GK5Q6ZS86 529 aa9.53□□□□□ -0.88
SSB-207ENST00000465871 SYTL4Q96C24 671 aaPredicted RBP9.53□□□□□ -0.88
SSB-207ENST00000465871 NT5C1AQ9BXI3 368 aa9.53□□□□□ -0.88
SSB-207ENST00000465871 ASCC2Q9H1I8 757 aaPredicted RBP9.53□□□□□ -0.88
SSB-207ENST00000465871 POLR2BP30876 1174 aaKnown RBP9.52□□□□□ -0.89
SSB-207ENST00000465871 CLCQ05315 142 aa9.52□□□□□ -0.89
SSB-207ENST00000465871 NMIQ13287 307 aaPredicted RBP9.52□□□□□ -0.89
SSB-207ENST00000465871 NLRC3Q7RTR2 1065 aa9.52□□□□□ -0.89
SSB-207ENST00000465871 KIAA0825Q8IV33 1275 aa9.52□□□□□ -0.89
SSB-207ENST00000465871 ENOX1Q8TC92 643 aaKnown RBP9.52□□□□□ -0.89
SSB-207ENST00000465871 DHX38Q92620 1227 aaKnown RBP9.52□□□□□ -0.89
SSB-207ENST00000465871 PPP1R16BQ96T49 567 aa9.52□□□□□ -0.89
SSB-207ENST00000465871 NSUN3Q9H649 340 aaKnown RBP9.52□□□□□ -0.89
SSB-207ENST00000465871 MCM4P33991 863 aa9.51□□□□□ -0.89
SSB-207ENST00000465871 ZNF76P36508 570 aa9.51□□□□□ -0.89
SSB-207ENST00000465871 CCNFP41002 786 aa9.51□□□□□ -0.89
SSB-207ENST00000465871 ZNF165P49910 485 aa9.51□□□□□ -0.89
SSB-207ENST00000465871 TEKQ02763 1124 aa9.51□□□□□ -0.89
SSB-207ENST00000465871 RAD51AP2Q09MP3 1159 aa9.51□□□□□ -0.89
SSB-207ENST00000465871 NBPF12Q5TAG4 269 aaPredicted RBP9.51□□□□□ -0.89
SSB-207ENST00000465871 SLITRK4Q8IW52 837 aa9.51□□□□□ -0.89
SSB-207ENST00000465871 OXR1Q8N573 874 aa9.51□□□□□ -0.89
SSB-207ENST00000465871 SYTL5Q8TDW5 730 aaPredicted RBP9.51□□□□□ -0.89
SSB-207ENST00000465871 NKD1Q969G9 470 aa9.51□□□□□ -0.89
SSB-207ENST00000465871 ATG4CQ96DT6 458 aa9.51□□□□□ -0.89
SSB-207ENST00000465871 DIRC2Q96SL1 478 aa9.51□□□□□ -0.89
SSB-207ENST00000465871 SPON2Q9BUD6 331 aa9.51□□□□□ -0.89
SSB-207ENST00000465871 HDAC8Q9BY41 377 aa9.51□□□□□ -0.89
SSB-207ENST00000465871 SP110Q9HB58 689 aa9.51□□□□□ -0.89
SSB-207ENST00000465871 FITM1A5D6W6 292 aa9.5□□□□□ -0.89
SSB-207ENST00000465871 MEIS3P2A8K0S8 358 aa9.5□□□□□ -0.89
SSB-207ENST00000465871 TSPAN15O95858 294 aa9.5□□□□□ -0.89
SSB-207ENST00000465871 LILRA2Q8N149 483 aa9.5□□□□□ -0.89
SSB-207ENST00000465871 FBXO15Q8NCQ5 510 aaPredicted RBP9.5□□□□□ -0.89
SSB-207ENST00000465871 TRHRP34981 398 aaPredicted RBP9.49□□□□□ -0.89
SSB-207ENST00000465871 MFAP1P55081 439 aaKnown RBP9.49□□□□□ -0.89
SSB-207ENST00000465871 DUSP4Q13115 394 aa9.49□□□□□ -0.89
SSB-207ENST00000465871 NR0B2Q15466 257 aa9.49□□□□□ -0.89
SSB-207ENST00000465871 LRRFIP1Q32MZ4 808 aaKnown RBP9.49□□□□□ -0.89
SSB-207ENST00000465871 EAF1Q96JC9 268 aaPredicted RBP9.49□□□□□ -0.89
SSB-207ENST00000465871 BACH2Q9BYV9 841 aa9.49□□□□□ -0.89
SSB-207ENST00000465871 RNF32Q9H0A6 362 aa9.49□□□□□ -0.89
SSB-207ENST00000465871 METTL5Q9NRN9 209 aaKnown RBP9.49□□□□□ -0.89
SSB-207ENST00000465871 CLEC3AO75596 197 aa9.48□□□□□ -0.89
SSB-207ENST00000465871 NME1P15531 152 aaKnown RBP9.48□□□□□ -0.89
SSB-207ENST00000465871 FANCCQ00597 558 aa9.48□□□□□ -0.89
SSB-207ENST00000465871 NBPF9Q3BBW0 867 aa9.48□□□□□ -0.89
SSB-207ENST00000465871 RNF111Q6ZNA4 994 aa9.48□□□□□ -0.89
SSB-207ENST00000465871 SYDE1Q6ZW31 735 aaPredicted RBP9.48□□□□□ -0.89
SSB-207ENST00000465871 DAGLBQ8NCG7 672 aa9.48□□□□□ -0.89
SSB-207ENST00000465871 EPB41L4BQ9H329 900 aa9.48□□□□□ -0.89
SSB-207ENST00000465871 C19orf44Q9H6X5 657 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms