RNA–Protein interactions for RNA: ENST00000465596.1

THBS3-205, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-205ENST00000465596 HAND2P61296 217 aa9.17□□□□□ -0.94
THBS3-205ENST00000465596 HERVK_113P62684 666 aa9.17□□□□□ -0.94
THBS3-205ENST00000465596 ZYXQ15942 572 aaKnown RBP9.17□□□□□ -0.94
THBS3-205ENST00000465596 FAM47AQ5JRC9 791 aa9.17□□□□□ -0.94
THBS3-205ENST00000465596 RCSD1Q6JBY9 416 aa9.17□□□□□ -0.94
THBS3-205ENST00000465596 CATSPERGQ6ZRH7 1159 aa9.17□□□□□ -0.94
THBS3-205ENST00000465596 RASGRP2Q7LDG7 609 aa9.17□□□□□ -0.94
THBS3-205ENST00000465596 AMOTL1Q8IY63 956 aa9.17□□□□□ -0.94
THBS3-205ENST00000465596 STK11IPQ8N1F8 1099 aa9.17□□□□□ -0.94
THBS3-205ENST00000465596 P2RX7Q99572 595 aaKnown RBP9.17□□□□□ -0.94
THBS3-205ENST00000465596 LSG1Q9H089 658 aaKnown RBP9.17□□□□□ -0.94
THBS3-205ENST00000465596 VCPKMTQ9H867 229 aa9.17□□□□□ -0.94
THBS3-205ENST00000465596 CABP5Q9NP86 173 aa9.17□□□□□ -0.94
THBS3-205ENST00000465596 PPP4R2Q9NY27 417 aa9.17□□□□□ -0.94
THBS3-205ENST00000465596 SYNPO2Q9UMS6 1093 aa9.17□□□□□ -0.94
THBS3-205ENST00000465596 ADAMTS5Q9UNA0 930 aa9.17□□□□□ -0.94
THBS3-205ENST00000465596 RANBP2P49792 3224 aaKnown RBP9.17□□□□□ -0.94
THBS3-205ENST00000465596 LAMA2P24043 3122 aaKnown RBP9.16□□□□□ -0.94
THBS3-205ENST00000465596 SPDYE16A6NNV3 312 aaPredicted RBP9.16□□□□□ -0.94
THBS3-205ENST00000465596 USP14P54578 494 aa9.16□□□□□ -0.94
THBS3-205ENST00000465596 MFAP1P55081 439 aaKnown RBP9.16□□□□□ -0.94
THBS3-205ENST00000465596 FAM110CQ1W6H9 321 aa9.16□□□□□ -0.94
THBS3-205ENST00000465596 AKNAD1Q5T1N1 836 aa9.16□□□□□ -0.94
THBS3-205ENST00000465596 STOX1Q6ZVD7 989 aa9.16□□□□□ -0.94
THBS3-205ENST00000465596 REPS2Q8NFH8 660 aa9.16□□□□□ -0.94
THBS3-205ENST00000465596 LPAR1Q92633 364 aa9.16□□□□□ -0.94
THBS3-205ENST00000465596 MAP4K1Q92918 833 aa9.16□□□□□ -0.94
THBS3-205ENST00000465596 ESYT1Q9BSJ8 1104 aa9.16□□□□□ -0.94
THBS3-205ENST00000465596 RBPJLQ9UBG7 517 aa9.16□□□□□ -0.94
THBS3-205ENST00000465596 KIAA1217Q5T5P2 1943 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 MYPNQ86TC9 1320 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 USP17L15C9J2P7 530 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 USP17L13C9JLJ4 530 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 USP17L11C9JVI0 530 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 USP17L18D6R9N7 530 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 USP17L22D6RA61 530 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 USP17L17D6RBQ6 530 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 USP17L19D6RCP7 530 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 USP17L20D6RJB6 530 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 WDR46O15213 610 aaKnown RBP9.15□□□□□ -0.94
THBS3-205ENST00000465596 NDUFB10O96000 172 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 NEFLP07196 543 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 CYP21A2P08686 494 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 PCP11498 1178 aaKnown RBP9.15□□□□□ -0.94
THBS3-205ENST00000465596 GCLCP48506 637 aaPredicted RBP9.15□□□□□ -0.94
THBS3-205ENST00000465596 TFAP4Q01664 338 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 PDE4BQ07343 736 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 USP17L24Q0WX57 530 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 TNS4Q8IZW8 715 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 GMCL1P1Q8NEA9 526 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 ERO1AQ96HE7 468 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 FEZ1Q99689 392 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 RPAP3Q9H6T3 665 aaPredicted RBP9.15□□□□□ -0.94
THBS3-205ENST00000465596 MKNK2Q9HBH9 465 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 ARHGEF10LQ9HCE6 1279 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 TCP11L1Q9NUJ3 509 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 FBXO28Q9NVF7 368 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 TMOD4Q9NZQ9 345 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 BTBD7Q9P203 1132 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 PNMA3Q9UL41 463 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 PTPN22Q9Y2R2 807 aa9.15□□□□□ -0.94
THBS3-205ENST00000465596 TTLL1O95922 423 aa9.14□□□□□ -0.95
THBS3-205ENST00000465596 IGHA2P01877 340 aa9.14□□□□□ -0.95
THBS3-205ENST00000465596 OSBPP22059 807 aa9.14□□□□□ -0.95
THBS3-205ENST00000465596 ERVK-9P63128 1117 aa9.14□□□□□ -0.95
THBS3-205ENST00000465596 ERVK-24P63145 666 aa9.14□□□□□ -0.95
THBS3-205ENST00000465596 PABPC4Q13310 644 aaKnown RBP eCLIP9.14□□□□□ -0.95
THBS3-205ENST00000465596 Q3C1V9 767 aa9.14□□□□□ -0.95
THBS3-205ENST00000465596 FBXO46Q6PJ61 603 aaPredicted RBP9.14□□□□□ -0.95
THBS3-205ENST00000465596 SPICE1Q8N0Z3 855 aa9.14□□□□□ -0.95
THBS3-205ENST00000465596 LRRC47Q8N1G4 583 aaKnown RBP9.14□□□□□ -0.95
THBS3-205ENST00000465596 ANKRD13CQ8N6S4 541 aa9.14□□□□□ -0.95
THBS3-205ENST00000465596 USP6NLQ92738 828 aa9.14□□□□□ -0.95
THBS3-205ENST00000465596 ABHD8Q96I13 439 aa9.14□□□□□ -0.95
THBS3-205ENST00000465596 NUP88Q99567 741 aaPredicted RBP9.14□□□□□ -0.95
THBS3-205ENST00000465596 PORCNQ9H237 461 aa9.14□□□□□ -0.95
THBS3-205ENST00000465596 ZNF287Q9HBT7 754 aa9.14□□□□□ -0.95
THBS3-205ENST00000465596 GJD2Q9UKL4 321 aa9.14□□□□□ -0.95
THBS3-205ENST00000465596 TRIM17Q9Y577 477 aa9.14□□□□□ -0.95
THBS3-205ENST00000465596 F5H6K3 240 aa9.13□□□□□ -0.95
THBS3-205ENST00000465596 SLC3A2P08195 630 aaKnown RBP9.13□□□□□ -0.95
THBS3-205ENST00000465596 TSPY3P0CV98 308 aa9.13□□□□□ -0.95
THBS3-205ENST00000465596 TSPY8P0CW00 308 aa9.13□□□□□ -0.95
THBS3-205ENST00000465596 SNHG28P0DPA3 235 aa9.13□□□□□ -0.95
THBS3-205ENST00000465596 DSG3P32926 999 aa9.13□□□□□ -0.95
THBS3-205ENST00000465596 PSMC4P43686 418 aa9.13□□□□□ -0.95
THBS3-205ENST00000465596 IRX3P78415 501 aaPredicted RBP9.13□□□□□ -0.95
THBS3-205ENST00000465596 KLRC3Q07444 240 aa9.13□□□□□ -0.95
THBS3-205ENST00000465596 NECTIN1Q15223 517 aa9.13□□□□□ -0.95
THBS3-205ENST00000465596 PKN2Q16513 984 aaKnown RBP9.13□□□□□ -0.95
THBS3-205ENST00000465596 FAM83BQ5T0W9 1011 aa9.13□□□□□ -0.95
THBS3-205ENST00000465596 ZNF444Q8N0Y2 327 aaPredicted RBP9.13□□□□□ -0.95
THBS3-205ENST00000465596 SMCR8Q8TEV9 937 aaPredicted RBP9.13□□□□□ -0.95
THBS3-205ENST00000465596 RUFY2Q8WXA3 655 aa9.13□□□□□ -0.95
THBS3-205ENST00000465596 ANKS1AQ92625 1134 aa9.13□□□□□ -0.95
THBS3-205ENST00000465596 ARMC5Q96C12 935 aa9.13□□□□□ -0.95
THBS3-205ENST00000465596 ATG4CQ96DT6 458 aa9.13□□□□□ -0.95
THBS3-205ENST00000465596 GMCL1Q96IK5 515 aa9.13□□□□□ -0.95
THBS3-205ENST00000465596 SH2D4AQ9H788 454 aa9.13□□□□□ -0.95
THBS3-205ENST00000465596 EFCC1Q9HA90 598 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms