RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 PDZD8Q8NEN9 1154 aa9.27□□□□□ -0.93
SMC4-205ENST00000465563 SYTL4Q96C24 671 aaPredicted RBP9.27□□□□□ -0.93
SMC4-205ENST00000465563 EPB41L4BQ9H329 900 aa9.27□□□□□ -0.93
SMC4-205ENST00000465563 DCP1AQ9NPI6 582 aaPredicted RBP9.27□□□□□ -0.93
SMC4-205ENST00000465563 PCDHA11Q9Y5I1 949 aa9.27□□□□□ -0.93
SMC4-205ENST00000465563 NFIBO00712 420 aa9.26□□□□□ -0.93
SMC4-205ENST00000465563 FBLN7Q53RD9 439 aa9.26□□□□□ -0.93
SMC4-205ENST00000465563 FAM196AQ6ZSG2 479 aa9.26□□□□□ -0.93
SMC4-205ENST00000465563 OXR1Q8N573 874 aa9.26□□□□□ -0.93
SMC4-205ENST00000465563 DHX38Q92620 1227 aaKnown RBP9.26□□□□□ -0.93
SMC4-205ENST00000465563 ZGLP1P0C6A0 271 aa9.25□□□□□ -0.93
SMC4-205ENST00000465563 GARTP22102 1010 aa9.25□□□□□ -0.93
SMC4-205ENST00000465563 CHMP4BP1P59074 171 aa9.25□□□□□ -0.93
SMC4-205ENST00000465563 MLECQ14165 292 aa9.25□□□□□ -0.93
SMC4-205ENST00000465563 FBXO27Q8NI29 283 aa9.25□□□□□ -0.93
SMC4-205ENST00000465563 KIF2CQ99661 725 aa9.25□□□□□ -0.93
SMC4-205ENST00000465563 KBTBD4Q9NVX7 518 aa9.25□□□□□ -0.93
SMC4-205ENST00000465563 DNAJA2O60884 412 aa9.24□□□□□ -0.93
SMC4-205ENST00000465563 TMEM253P0C7T8 217 aa9.24□□□□□ -0.93
SMC4-205ENST00000465563 C1QTNF9P0C862 333 aa9.24□□□□□ -0.93
SMC4-205ENST00000465563 CFPP27918 469 aa9.24□□□□□ -0.93
SMC4-205ENST00000465563 GBP1P32455 592 aa9.24□□□□□ -0.93
SMC4-205ENST00000465563 TRHRP34981 398 aaPredicted RBP9.24□□□□□ -0.93
SMC4-205ENST00000465563 LILRA2Q8N149 483 aa9.24□□□□□ -0.93
SMC4-205ENST00000465563 ZSCAN18Q8TBC5 510 aaPredicted RBP9.24□□□□□ -0.93
SMC4-205ENST00000465563 ROBO2Q9HCK4 1378 aa9.24□□□□□ -0.93
SMC4-205ENST00000465563 RBM47A0AV96 593 aaKnown RBP9.23□□□□□ -0.93
SMC4-205ENST00000465563 FITM1A5D6W6 292 aa9.23□□□□□ -0.93
SMC4-205ENST00000465563 TLR3O15455 904 aaKnown RBP9.23□□□□□ -0.93
SMC4-205ENST00000465563 KRT1P04264 644 aa9.23□□□□□ -0.93
SMC4-205ENST00000465563 CLEC16AQ2KHT3 1053 aa9.23□□□□□ -0.93
SMC4-205ENST00000465563 CWF19L2Q2TBE0 894 aaKnown RBP9.23□□□□□ -0.93
SMC4-205ENST00000465563 ERMP1Q7Z2K6 904 aa9.23□□□□□ -0.93
SMC4-205ENST00000465563 RNF32Q9H0A6 362 aa9.23□□□□□ -0.93
SMC4-205ENST00000465563 GZF1Q9H116 711 aaPredicted RBP9.23□□□□□ -0.93
SMC4-205ENST00000465563 C19orf44Q9H6X5 657 aa9.23□□□□□ -0.93
SMC4-205ENST00000465563 KCNK12Q9HB15 430 aa9.23□□□□□ -0.93
SMC4-205ENST00000465563 SP110Q9HB58 689 aa9.23□□□□□ -0.93
SMC4-205ENST00000465563 RGS13O14921 159 aa9.22□□□□□ -0.93
SMC4-205ENST00000465563 LRRC56Q8IYG6 542 aaPredicted RBP9.22□□□□□ -0.93
SMC4-205ENST00000465563 ASCC2Q9H1I8 757 aaPredicted RBP9.22□□□□□ -0.93
SMC4-205ENST00000465563 COPRSQ9NQ92 184 aa9.22□□□□□ -0.93
SMC4-205ENST00000465563 SHISA3A0PJX4 238 aa9.21□□□□□ -0.94
SMC4-205ENST00000465563 FBXL19Q6PCT2 694 aa9.21□□□□□ -0.94
SMC4-205ENST00000465563 SPPL2CQ8IUH8 684 aa9.21□□□□□ -0.94
SMC4-205ENST00000465563 VWCEQ96DN2 955 aa9.21□□□□□ -0.94
SMC4-205ENST00000465563 LRRC3Q9BY71 257 aa9.21□□□□□ -0.94
SMC4-205ENST00000465563 KCNQ5Q9NR82 932 aa9.21□□□□□ -0.94
SMC4-205ENST00000465563 SUPT16HQ9Y5B9 1047 aaKnown RBP9.21□□□□□ -0.94
SMC4-205ENST00000465563 SLC22A31A6NKX4 558 aa9.2□□□□□ -0.94
SMC4-205ENST00000465563 RAG1P15918 1043 aa9.2□□□□□ -0.94
SMC4-205ENST00000465563 EIF4A3P38919 411 aaKnown RBP9.2□□□□□ -0.94
SMC4-205ENST00000465563 DUSP4Q13115 394 aa9.2□□□□□ -0.94
SMC4-205ENST00000465563 NR0B2Q15466 257 aa9.2□□□□□ -0.94
SMC4-205ENST00000465563 C1QL4Q86Z23 238 aa9.2□□□□□ -0.94
SMC4-205ENST00000465563 ENOX1Q8TC92 643 aaKnown RBP9.2□□□□□ -0.94
SMC4-205ENST00000465563 SLC26A8Q96RN1 970 aa9.2□□□□□ -0.94
SMC4-205ENST00000465563 PCDHB14Q9Y5E9 798 aa9.2□□□□□ -0.94
SMC4-205ENST00000465563 GREM1O60565 184 aa9.19□□□□□ -0.94
SMC4-205ENST00000465563 RNF4P78317 190 aa9.19□□□□□ -0.94
SMC4-205ENST00000465563 TEKQ02763 1124 aa9.19□□□□□ -0.94
SMC4-205ENST00000465563 CHRNEQ04844 493 aa9.19□□□□□ -0.94
SMC4-205ENST00000465563 ARSHQ5FYA8 562 aa9.19□□□□□ -0.94
SMC4-205ENST00000465563 ATG14Q6ZNE5 492 aa9.19□□□□□ -0.94
SMC4-205ENST00000465563 SLC6A17Q9H1V8 727 aa9.19□□□□□ -0.94
SMC4-205ENST00000465563 CWC22Q9HCG8 908 aaKnown RBP9.19□□□□□ -0.94
SMC4-205ENST00000465563 BRMS1Q9HCU9 246 aa9.19□□□□□ -0.94
SMC4-205ENST00000465563 ATE1O95260 518 aa9.18□□□□□ -0.94
SMC4-205ENST00000465563 MED14OSP0DP75 135 aa9.18□□□□□ -0.94
SMC4-205ENST00000465563 NMIQ13287 307 aaPredicted RBP9.18□□□□□ -0.94
SMC4-205ENST00000465563 TIGD5Q53EQ6 642 aa9.18□□□□□ -0.94
SMC4-205ENST00000465563 KCNN1Q92952 543 aa9.18□□□□□ -0.94
SMC4-205ENST00000465563 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.18□□□□□ -0.94
SMC4-205ENST00000465563 GMIPQ9P107 970 aa9.18□□□□□ -0.94
SMC4-205ENST00000465563 TCAF2A6NFQ2 919 aa9.17□□□□□ -0.94
SMC4-205ENST00000465563 NPIPB6E9PJ23 425 aa9.17□□□□□ -0.94
SMC4-205ENST00000465563 ETV2O00321 342 aaPredicted RBP9.17□□□□□ -0.94
SMC4-205ENST00000465563 UBOX5O94941 541 aa9.17□□□□□ -0.94
SMC4-205ENST00000465563 GLDCP23378 1020 aa9.17□□□□□ -0.94
SMC4-205ENST00000465563 ZNF326Q5BKZ1 582 aaKnown RBP9.17□□□□□ -0.94
SMC4-205ENST00000465563 IRF2BP1Q8IU81 584 aa9.17□□□□□ -0.94
SMC4-205ENST00000465563 SIAH1Q8IUQ4 282 aa9.17□□□□□ -0.94
SMC4-205ENST00000465563 ANKS4BQ8N8V4 417 aa9.17□□□□□ -0.94
SMC4-205ENST00000465563 ZNF296Q8WUU4 475 aaPredicted RBP9.17□□□□□ -0.94
SMC4-205ENST00000465563 BCL2L13Q9BXK5 485 aa9.17□□□□□ -0.94
SMC4-205ENST00000465563 CD320Q9NPF0 282 aa9.17□□□□□ -0.94
SMC4-205ENST00000465563 SNX17Q15036 470 aa9.16□□□□□ -0.94
SMC4-205ENST00000465563 KCNA10Q16322 511 aa9.16□□□□□ -0.94
SMC4-205ENST00000465563 HS2ST1Q7LGA3 356 aa9.16□□□□□ -0.94
SMC4-205ENST00000465563 SYTL5Q8TDW5 730 aaPredicted RBP9.16□□□□□ -0.94
SMC4-205ENST00000465563 KRTAP4-7Q9BYR0 210 aa9.16□□□□□ -0.94
SMC4-205ENST00000465563 BCL11AQ9H165 835 aa9.16□□□□□ -0.94
SMC4-205ENST00000465563 GGT7Q9UJ14 662 aa9.16□□□□□ -0.94
SMC4-205ENST00000465563 YBX2Q9Y2T7 364 aaKnown RBP9.16□□□□□ -0.94
SMC4-205ENST00000465563 ZSCAN22P10073 491 aaPredicted RBP9.15□□□□□ -0.94
SMC4-205ENST00000465563 RNF111Q6ZNA4 994 aa9.15□□□□□ -0.94
SMC4-205ENST00000465563 LCNL1Q6ZST4 164 aa9.15□□□□□ -0.94
SMC4-205ENST00000465563 DAGLBQ8NCG7 672 aa9.15□□□□□ -0.94
SMC4-205ENST00000465563 LINC01599Q8WXQ3 324 aa9.15□□□□□ -0.94
SMC4-205ENST00000465563 EHMT1Q9H9B1 1298 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms