RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 ERVK-9P63128 1117 aa16.42■□□□□ 0.22
HDAC6-215ENST00000465457 ERVK-24P63145 666 aa16.42■□□□□ 0.22
HDAC6-215ENST00000465457 GORABQ5T7V8 394 aa16.42■□□□□ 0.22
HDAC6-215ENST00000465457 PI16Q6UXB8 463 aa16.42■□□□□ 0.22
HDAC6-215ENST00000465457 FAM163AQ96GL9 167 aaPredicted RBP16.42■□□□□ 0.22
HDAC6-215ENST00000465457 ZNF512BQ96KM6 892 aaPredicted RBP16.42■□□□□ 0.22
HDAC6-215ENST00000465457 DNAJC18Q9H819 358 aa16.42■□□□□ 0.22
HDAC6-215ENST00000465457 ATP11BQ9Y2G3 1177 aa16.42■□□□□ 0.22
HDAC6-215ENST00000465457 MYO9BQ13459 2157 aa16.42■□□□□ 0.22
HDAC6-215ENST00000465457 KBTBD3Q8NAB2 608 aa16.41■□□□□ 0.22
HDAC6-215ENST00000465457 TRPV1Q8NER1 839 aa16.41■□□□□ 0.22
HDAC6-215ENST00000465457 BADQ92934 168 aa16.41■□□□□ 0.22
HDAC6-215ENST00000465457 LSG1Q9H089 658 aaKnown RBP16.41■□□□□ 0.22
HDAC6-215ENST00000465457 PRDM5Q9NQX1 630 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-215ENST00000465457 CNMDO75829 334 aa16.4■□□□□ 0.22
HDAC6-215ENST00000465457 GDF11O95390 407 aa16.4■□□□□ 0.22
HDAC6-215ENST00000465457 MAPK4P31152 587 aa16.4■□□□□ 0.22
HDAC6-215ENST00000465457 HOXA7P31268 230 aaPredicted RBP16.4■□□□□ 0.22
HDAC6-215ENST00000465457 BACE1P56817 501 aa16.4■□□□□ 0.22
HDAC6-215ENST00000465457 TTC39AQ5SRH9 613 aa16.4■□□□□ 0.22
HDAC6-215ENST00000465457 SH3RF1Q7Z6J0 888 aa16.4■□□□□ 0.22
HDAC6-215ENST00000465457 PLEKHH3Q7Z736 793 aa16.4■□□□□ 0.22
HDAC6-215ENST00000465457 PAG1Q9NWQ8 432 aa16.4■□□□□ 0.22
HDAC6-215ENST00000465457 DDX20Q9UHI6 824 aaKnown RBP16.4■□□□□ 0.22
HDAC6-215ENST00000465457 CIZ1Q9ULV3 898 aaPredicted RBP16.4■□□□□ 0.22
HDAC6-215ENST00000465457 CCDC171Q6TFL3 1326 aa16.4■□□□□ 0.22
HDAC6-215ENST00000465457 ZFYP08048 801 aaPredicted RBP16.39■□□□□ 0.21
HDAC6-215ENST00000465457 TIMM10P62072 90 aa16.39■□□□□ 0.21
HDAC6-215ENST00000465457 MAP2K5Q13163 448 aa16.39■□□□□ 0.21
HDAC6-215ENST00000465457 NMIQ13287 307 aaPredicted RBP16.39■□□□□ 0.21
HDAC6-215ENST00000465457 GJC2Q5T442 439 aaPredicted RBP16.39■□□□□ 0.21
HDAC6-215ENST00000465457 TRMT44Q8IYL2 757 aaKnown RBP16.39■□□□□ 0.21
HDAC6-215ENST00000465457 ZGPATQ8N5A5 531 aaKnown RBP16.39■□□□□ 0.21
HDAC6-215ENST00000465457 XAGE2Q96GT9 111 aa16.39■□□□□ 0.21
HDAC6-215ENST00000465457 DNAJC2Q99543 621 aaKnown RBP16.39■□□□□ 0.21
HDAC6-215ENST00000465457 WDR18Q9BV38 432 aa16.39■□□□□ 0.21
HDAC6-215ENST00000465457 AS3MTQ9HBK9 375 aa16.39■□□□□ 0.21
HDAC6-215ENST00000465457 DNM1LO00429 736 aa16.38■□□□□ 0.21
HDAC6-215ENST00000465457 HSP90AA1P07900 732 aaKnown RBP16.38■□□□□ 0.21
HDAC6-215ENST00000465457 UQCRFS1P1P0C7P4 283 aa16.38■□□□□ 0.21
HDAC6-215ENST00000465457 CNGA1P29973 690 aa16.38■□□□□ 0.21
HDAC6-215ENST00000465457 CYP2C19P33261 490 aa16.38■□□□□ 0.21
HDAC6-215ENST00000465457 EPHB4P54760 987 aa16.38■□□□□ 0.21
HDAC6-215ENST00000465457 TRIM60Q495X7 471 aa16.38■□□□□ 0.21
HDAC6-215ENST00000465457 RNF20Q5VTR2 975 aa16.38■□□□□ 0.21
HDAC6-215ENST00000465457 ANO1Q5XXA6 986 aa16.38■□□□□ 0.21
HDAC6-215ENST00000465457 ANTXR1Q9H6X2 564 aa16.38■□□□□ 0.21
HDAC6-215ENST00000465457 PDLIM7Q9NR12 457 aa16.38■□□□□ 0.21
HDAC6-215ENST00000465457 TMOD4Q9NZQ9 345 aa16.38■□□□□ 0.21
HDAC6-215ENST00000465457 CHMP5Q9NZZ3 219 aa16.38■□□□□ 0.21
HDAC6-215ENST00000465457 PRKAG2Q9UGJ0 569 aa16.38■□□□□ 0.21
HDAC6-215ENST00000465457 ZNF236Q9UL36 1845 aa16.38■□□□□ 0.21
HDAC6-215ENST00000465457 SMCHD1A6NHR9 2005 aa16.37■□□□□ 0.21
HDAC6-215ENST00000465457 TRIM43BA6NCK2 446 aa16.37■□□□□ 0.21
HDAC6-215ENST00000465457 TNFRSF10AO00220 468 aa16.37■□□□□ 0.21
HDAC6-215ENST00000465457 NPM3O75607 178 aaKnown RBP16.37■□□□□ 0.21
HDAC6-215ENST00000465457 ITGB8P26012 769 aa16.37■□□□□ 0.21
HDAC6-215ENST00000465457 SMAD3P84022 425 aaKnown RBP16.37■□□□□ 0.21
HDAC6-215ENST00000465457 TTF1Q15361 905 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-215ENST00000465457 TJAP1Q5JTD0 557 aa16.37■□□□□ 0.21
HDAC6-215ENST00000465457 NPLOC4Q8TAT6 608 aa16.37■□□□□ 0.21
HDAC6-215ENST00000465457 SH3RF3Q8TEJ3 882 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-215ENST00000465457 LPAR1Q92633 364 aa16.37■□□□□ 0.21
HDAC6-215ENST00000465457 KCNB2Q92953 911 aa16.37■□□□□ 0.21
HDAC6-215ENST00000465457 TRIM43Q96BQ3 446 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-215ENST00000465457 NSUN4Q96CB9 384 aaKnown RBP16.37■□□□□ 0.21
HDAC6-215ENST00000465457 HELLSQ9NRZ9 838 aa16.37■□□□□ 0.21
HDAC6-215ENST00000465457 EMILIN3Q9NT22 766 aa16.37■□□□□ 0.21
HDAC6-215ENST00000465457 HMG20BQ9P0W2 317 aa16.37■□□□□ 0.21
HDAC6-215ENST00000465457 REV3LO60673 3130 aa16.37■□□□□ 0.21
HDAC6-215ENST00000465457 PDS5AQ29RF7 1337 aaKnown RBP16.37■□□□□ 0.21
HDAC6-215ENST00000465457 PLXNA1Q9UIW2 1896 aa16.37■□□□□ 0.21
HDAC6-215ENST00000465457 MYH1P12882 1939 aa16.37■□□□□ 0.21
HDAC6-215ENST00000465457 BDP1A6H8Y1 2624 aa16.36■□□□□ 0.21
HDAC6-215ENST00000465457 GRIN2CQ14957 1233 aa16.36■□□□□ 0.21
HDAC6-215ENST00000465457 MCMDC2Q4G0Z9 681 aa16.36■□□□□ 0.21
HDAC6-215ENST00000465457 WDR78Q5VTH9 848 aa16.36■□□□□ 0.21
HDAC6-215ENST00000465457 ZSCAN25Q6NSZ9 544 aa16.36■□□□□ 0.21
HDAC6-215ENST00000465457 CCAR1Q8IX12 1150 aaKnown RBP16.36■□□□□ 0.21
HDAC6-215ENST00000465457 SLF2Q8IX21 1173 aa16.36■□□□□ 0.21
HDAC6-215ENST00000465457 TEX11Q8IYF3 940 aa16.36■□□□□ 0.21
HDAC6-215ENST00000465457 SYMPKQ92797 1274 aaKnown RBP16.36■□□□□ 0.21
HDAC6-215ENST00000465457 MAP4K1Q92918 833 aa16.36■□□□□ 0.21
HDAC6-215ENST00000465457 TM6SF1Q9BZW5 370 aa16.36■□□□□ 0.21
HDAC6-215ENST00000465457 IL25Q9H293 177 aa16.36■□□□□ 0.21
HDAC6-215ENST00000465457 CHD9Q3L8U1 2897 aa16.35■□□□□ 0.21
HDAC6-215ENST00000465457 GOLIM4O00461 696 aa16.35■□□□□ 0.21
HDAC6-215ENST00000465457 ZBTB22O15209 634 aa16.35■□□□□ 0.21
HDAC6-215ENST00000465457 CYBAP13498 195 aa16.35■□□□□ 0.21
HDAC6-215ENST00000465457 ZYXQ15942 572 aaKnown RBP16.35■□□□□ 0.21
HDAC6-215ENST00000465457 SLC39A5Q6ZMH5 540 aa16.35■□□□□ 0.21
HDAC6-215ENST00000465457 EDC3Q96F86 508 aaKnown RBP16.35■□□□□ 0.21
HDAC6-215ENST00000465457 FAM227BQ96M60 508 aa16.35■□□□□ 0.21
HDAC6-215ENST00000465457 HERC5Q9UII4 1024 aaKnown RBP16.35■□□□□ 0.21
HDAC6-215ENST00000465457 ZBTB21Q9ULJ3 1066 aa16.35■□□□□ 0.21
HDAC6-215ENST00000465457 A0A0G2JMZ2 1700 aa16.35■□□□□ 0.21
HDAC6-215ENST00000465457 GBF1Q92538 1859 aa16.35■□□□□ 0.21
HDAC6-215ENST00000465457 TCF20Q9UGU0 1960 aaKnown RBP16.35■□□□□ 0.21
HDAC6-215ENST00000465457 A0A0D9SFI3 127 aa16.34■□□□□ 0.21
HDAC6-215ENST00000465457 USP17L10C9JJH3 530 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms