RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 EHD4Q9H223 541 aa20.74■□□□□ 0.91
CPSF4-209ENST00000465132 M0R2C6 588 aa20.73■□□□□ 0.91
CPSF4-209ENST00000465132 REC8O95072 547 aa20.73■□□□□ 0.91
CPSF4-209ENST00000465132 ERVK-9P63128 1117 aa20.73■□□□□ 0.91
CPSF4-209ENST00000465132 ERVK-24P63145 666 aa20.73■□□□□ 0.91
CPSF4-209ENST00000465132 POTEEQ6S8J3 1075 aa20.73■□□□□ 0.91
CPSF4-209ENST00000465132 CTNNA3Q9UI47 895 aa20.73■□□□□ 0.91
CPSF4-209ENST00000465132 SERPINB13Q9UIV8 391 aa20.73■□□□□ 0.91
CPSF4-209ENST00000465132 PLXNB2O15031 1838 aa20.73■□□□□ 0.91
CPSF4-209ENST00000465132 A0A1W2PPC1 479 aa20.72■□□□□ 0.91
CPSF4-209ENST00000465132 SGSM2O43147 1006 aa20.72■□□□□ 0.91
CPSF4-209ENST00000465132 TDO2P48775 406 aa20.72■□□□□ 0.91
CPSF4-209ENST00000465132 MNX1P50219 401 aaPredicted RBP20.72■□□□□ 0.91
CPSF4-209ENST00000465132 USP6NLQ92738 828 aa20.72■□□□□ 0.91
CPSF4-209ENST00000465132 C12orf42Q96LP6 360 aa20.72■□□□□ 0.91
CPSF4-209ENST00000465132 ESYT1Q9BSJ8 1104 aa20.72■□□□□ 0.91
CPSF4-209ENST00000465132 NBPF3Q9H094 633 aa20.72■□□□□ 0.91
CPSF4-209ENST00000465132 PORCNQ9H237 461 aa20.72■□□□□ 0.91
CPSF4-209ENST00000465132 ARPP21Q9UBL0 812 aaPredicted RBP20.72■□□□□ 0.91
CPSF4-209ENST00000465132 MYH1P12882 1939 aa20.71■□□□□ 0.91
CPSF4-209ENST00000465132 SLC3A2P08195 630 aaKnown RBP20.71■□□□□ 0.91
CPSF4-209ENST00000465132 PRKAR2AP13861 404 aaKnown RBP20.71■□□□□ 0.91
CPSF4-209ENST00000465132 TRMT44Q8IYL2 757 aaKnown RBP20.71■□□□□ 0.91
CPSF4-209ENST00000465132 SEC62Q99442 399 aaKnown RBP20.71■□□□□ 0.91
CPSF4-209ENST00000465132 PAGR1Q9BTK6 254 aa20.71■□□□□ 0.91
CPSF4-209ENST00000465132 DSCC1Q9BVC3 393 aa20.71■□□□□ 0.91
CPSF4-209ENST00000465132 NAPBQ9H115 298 aa20.71■□□□□ 0.91
CPSF4-209ENST00000465132 ZNF287Q9HBT7 754 aa20.71■□□□□ 0.91
CPSF4-209ENST00000465132 MCM9Q9NXL9 1143 aa20.71■□□□□ 0.91
CPSF4-209ENST00000465132 OGDHLQ9ULD0 1010 aa20.71■□□□□ 0.91
CPSF4-209ENST00000465132 RANBP2P49792 3224 aaKnown RBP20.7■□□□□ 0.9
CPSF4-209ENST00000465132 EPB41L2O43491 1005 aaKnown RBP20.7■□□□□ 0.9
CPSF4-209ENST00000465132 POLR3DP05423 398 aaPredicted RBP20.7■□□□□ 0.9
CPSF4-209ENST00000465132 ALX1Q15699 326 aa20.7■□□□□ 0.9
CPSF4-209ENST00000465132 ZYXQ15942 572 aaKnown RBP20.7■□□□□ 0.9
CPSF4-209ENST00000465132 CERKLQ49MI3 558 aaPredicted RBP20.7■□□□□ 0.9
CPSF4-209ENST00000465132 MORN1Q5T089 497 aa20.7■□□□□ 0.9
CPSF4-209ENST00000465132 GPR142Q7Z601 462 aa20.7■□□□□ 0.9
CPSF4-209ENST00000465132 PLEKHH3Q7Z736 793 aa20.7■□□□□ 0.9
CPSF4-209ENST00000465132 CCAR1Q8IX12 1150 aaKnown RBP20.7■□□□□ 0.9
CPSF4-209ENST00000465132 FEZ1Q99689 392 aa20.7■□□□□ 0.9
CPSF4-209ENST00000465132 DCP1AQ9NPI6 582 aaPredicted RBP20.7■□□□□ 0.9
CPSF4-209ENST00000465132 NAV1Q8NEY1 1877 aa20.7■□□□□ 0.9
CPSF4-209ENST00000465132 ZMYM6O95789 1325 aa20.7■□□□□ 0.9
CPSF4-209ENST00000465132 USP17L15C9J2P7 530 aa20.69■□□□□ 0.9
CPSF4-209ENST00000465132 USP17L13C9JLJ4 530 aa20.69■□□□□ 0.9
CPSF4-209ENST00000465132 USP17L11C9JVI0 530 aa20.69■□□□□ 0.9
CPSF4-209ENST00000465132 USP17L18D6R9N7 530 aa20.69■□□□□ 0.9
CPSF4-209ENST00000465132 USP17L22D6RA61 530 aa20.69■□□□□ 0.9
CPSF4-209ENST00000465132 USP17L17D6RBQ6 530 aa20.69■□□□□ 0.9
CPSF4-209ENST00000465132 USP17L19D6RCP7 530 aa20.69■□□□□ 0.9
CPSF4-209ENST00000465132 USP17L20D6RJB6 530 aa20.69■□□□□ 0.9
CPSF4-209ENST00000465132 ZKSCAN1P17029 563 aaPredicted RBP20.69■□□□□ 0.9
CPSF4-209ENST00000465132 RGS2P41220 211 aa20.69■□□□□ 0.9
CPSF4-209ENST00000465132 USP14P54578 494 aa20.69■□□□□ 0.9
CPSF4-209ENST00000465132 USP17L24Q0WX57 530 aa20.69■□□□□ 0.9
CPSF4-209ENST00000465132 RAB3GAP1Q15042 981 aa20.69■□□□□ 0.9
CPSF4-209ENST00000465132 ABCB5Q2M3G0 1257 aa20.69■□□□□ 0.9
CPSF4-209ENST00000465132 SLFNL1Q499Z3 407 aa20.69■□□□□ 0.9
CPSF4-209ENST00000465132 C7orf61Q8IZ16 206 aa20.69■□□□□ 0.9
CPSF4-209ENST00000465132 IFNL3Q8IZI9 196 aa20.69■□□□□ 0.9
CPSF4-209ENST00000465132 KIAA1683Q9H0B3 1180 aa20.69■□□□□ 0.9
CPSF4-209ENST00000465132 C11orf49Q9H6J7 331 aa20.69■□□□□ 0.9
CPSF4-209ENST00000465132 RABGAP1Q9Y3P9 1069 aa20.69■□□□□ 0.9
CPSF4-209ENST00000465132 GSG1L2A8MUP6 293 aa20.68■□□□□ 0.9
CPSF4-209ENST00000465132 CHGBP05060 677 aa20.68■□□□□ 0.9
CPSF4-209ENST00000465132 HSPD1P10809 573 aaKnown RBP20.68■□□□□ 0.9
CPSF4-209ENST00000465132 SHMT1P34896 483 aa20.68■□□□□ 0.9
CPSF4-209ENST00000465132 PLCD1P51178 756 aa20.68■□□□□ 0.9
CPSF4-209ENST00000465132 CACNB2Q08289 660 aaPredicted RBP20.68■□□□□ 0.9
CPSF4-209ENST00000465132 SBK1Q52WX2 424 aa20.68■□□□□ 0.9
CPSF4-209ENST00000465132 SDR42E1Q8WUS8 393 aa20.68■□□□□ 0.9
CPSF4-209ENST00000465132 ALPK3Q96L96 1907 aa20.68■□□□□ 0.9
CPSF4-209ENST00000465132 SZT2Q5T011 3432 aa20.68■□□□□ 0.9
CPSF4-209ENST00000465132 CNMDO75829 334 aa20.67■□□□□ 0.9
CPSF4-209ENST00000465132 NT5C2P49902 561 aa20.67■□□□□ 0.9
CPSF4-209ENST00000465132 CCL14Q16627 93 aa20.67■□□□□ 0.9
CPSF4-209ENST00000465132 CATSPERGQ6ZRH7 1159 aa20.67■□□□□ 0.9
CPSF4-209ENST00000465132 CCDC129Q6ZRS4 1044 aa20.67■□□□□ 0.9
CPSF4-209ENST00000465132 ACER1Q8TDN7 264 aa20.67■□□□□ 0.9
CPSF4-209ENST00000465132 APBA2Q99767 749 aa20.67■□□□□ 0.9
CPSF4-209ENST00000465132 CABP5Q9NP86 173 aa20.67■□□□□ 0.9
CPSF4-209ENST00000465132 U3KPZ7 1027 aaPredicted RBP20.67■□□□□ 0.9
CPSF4-209ENST00000465132 PRKAB2O43741 272 aa20.66■□□□□ 0.9
CPSF4-209ENST00000465132 VCAM1P19320 739 aa20.66■□□□□ 0.9
CPSF4-209ENST00000465132 CCNA1P78396 465 aa20.66■□□□□ 0.9
CPSF4-209ENST00000465132 ZNF589Q86UQ0 364 aaPredicted RBP20.66■□□□□ 0.9
CPSF4-209ENST00000465132 GDF15Q99988 308 aa20.66■□□□□ 0.9
CPSF4-209ENST00000465132 CWC22Q9HCG8 908 aaKnown RBP20.66■□□□□ 0.9
CPSF4-209ENST00000465132 ANO2Q9NQ90 1003 aa20.66■□□□□ 0.9
CPSF4-209ENST00000465132 ZMYND8Q9ULU4 1186 aaPredicted RBP20.66■□□□□ 0.9
CPSF4-209ENST00000465132 DDX60LQ5H9U9 1706 aaKnown RBP20.65■□□□□ 0.9
CPSF4-209ENST00000465132 SOX1O00570 391 aaPredicted RBP20.65■□□□□ 0.9
CPSF4-209ENST00000465132 CCND3P30281 292 aaPredicted RBP20.65■□□□□ 0.9
CPSF4-209ENST00000465132 GUCY1A2P33402 732 aa20.65■□□□□ 0.9
CPSF4-209ENST00000465132 GABPAQ06546 454 aa20.65■□□□□ 0.9
CPSF4-209ENST00000465132 MAP2K5Q13163 448 aa20.65■□□□□ 0.9
CPSF4-209ENST00000465132 IMMTQ16891 758 aaKnown RBP20.65■□□□□ 0.9
CPSF4-209ENST00000465132 RNF20Q5VTR2 975 aa20.65■□□□□ 0.9
CPSF4-209ENST00000465132 LHX8Q68G74 356 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms