RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 USP6NLQ92738 828 aa18.57■□□□□ 0.56
HOXB3-204ENST00000465120 CCDC17Q96LX7 622 aa18.57■□□□□ 0.56
HOXB3-204ENST00000465120 NBPF3Q9H094 633 aa18.57■□□□□ 0.56
HOXB3-204ENST00000465120 PUS7LQ9H0K6 701 aaKnown RBP18.57■□□□□ 0.56
HOXB3-204ENST00000465120 DCTPP1Q9H773 170 aa18.57■□□□□ 0.56
HOXB3-204ENST00000465120 SH2D4AQ9H788 454 aa18.57■□□□□ 0.56
HOXB3-204ENST00000465120 BAZ2AQ9UIF9 1905 aaKnown RBP18.57■□□□□ 0.56
HOXB3-204ENST00000465120 PTPREP23469 700 aa18.56■□□□□ 0.56
HOXB3-204ENST00000465120 FXR1P51114 621 aaKnown RBP eCLIP18.56■□□□□ 0.56
HOXB3-204ENST00000465120 LBX2Q6XYB7 198 aa18.56■□□□□ 0.56
HOXB3-204ENST00000465120 CLEC10AQ8IUN9 316 aa18.56■□□□□ 0.56
HOXB3-204ENST00000465120 SPICE1Q8N0Z3 855 aa18.56■□□□□ 0.56
HOXB3-204ENST00000465120 MYH8P13535 1937 aa18.56■□□□□ 0.56
HOXB3-204ENST00000465120 MYH7P12883 1935 aa18.55■□□□□ 0.56
HOXB3-204ENST00000465120 SLC15A5A6NIM6 579 aa18.55■□□□□ 0.56
HOXB3-204ENST00000465120 SMIM22K7EJ46 135 aa18.55■□□□□ 0.56
HOXB3-204ENST00000465120 RAD21O60216 631 aa18.55■□□□□ 0.56
HOXB3-204ENST00000465120 PLS1Q14651 629 aa18.55■□□□□ 0.56
HOXB3-204ENST00000465120 MAP3K21Q5TCX8 1036 aa18.55■□□□□ 0.56
HOXB3-204ENST00000465120 MFSD14CQ5VZR4 134 aa18.55■□□□□ 0.56
HOXB3-204ENST00000465120 TSHZ3Q63HK5 1081 aa18.55■□□□□ 0.56
HOXB3-204ENST00000465120 STK11IPQ8N1F8 1099 aa18.55■□□□□ 0.56
HOXB3-204ENST00000465120 C11orf49Q9H6J7 331 aa18.55■□□□□ 0.56
HOXB3-204ENST00000465120 RBM27Q9P2N5 1060 aaKnown RBP18.55■□□□□ 0.56
HOXB3-204ENST00000465120 FLOT1O75955 427 aa18.54■□□□□ 0.56
HOXB3-204ENST00000465120 CCND3P30281 292 aaPredicted RBP18.54■□□□□ 0.56
HOXB3-204ENST00000465120 CTR9Q6PD62 1173 aa18.54■□□□□ 0.56
HOXB3-204ENST00000465120 C16orf86Q6ZW13 317 aa18.54■□□□□ 0.56
HOXB3-204ENST00000465120 DPP9Q86TI2 863 aa18.54■□□□□ 0.56
HOXB3-204ENST00000465120 LPAR1Q92633 364 aa18.54■□□□□ 0.56
HOXB3-204ENST00000465120 OGDHLQ9ULD0 1010 aa18.54■□□□□ 0.56
HOXB3-204ENST00000465120 TMX2Q9Y320 296 aa18.54■□□□□ 0.56
HOXB3-204ENST00000465120 MINDY4BA8MYZ0 360 aa18.53■□□□□ 0.56
HOXB3-204ENST00000465120 CNGA1P29973 690 aa18.53■□□□□ 0.56
HOXB3-204ENST00000465120 KIAA1755Q5JYT7 1200 aa18.53■□□□□ 0.56
HOXB3-204ENST00000465120 C7orf61Q8IZ16 206 aa18.53■□□□□ 0.56
HOXB3-204ENST00000465120 KBTBD3Q8NAB2 608 aa18.53■□□□□ 0.56
HOXB3-204ENST00000465120 MOV10L1Q9BXT6 1211 aaKnown RBP18.53■□□□□ 0.56
HOXB3-204ENST00000465120 VCPKMTQ9H867 229 aa18.53■□□□□ 0.56
HOXB3-204ENST00000465120 ARPP21Q9UBL0 812 aaPredicted RBP18.53■□□□□ 0.56
HOXB3-204ENST00000465120 APPP05067 770 aa18.52■□□□□ 0.56
HOXB3-204ENST00000465120 EEF2P13639 858 aaKnown RBP18.52■□□□□ 0.56
HOXB3-204ENST00000465120 DSG3P32926 999 aa18.52■□□□□ 0.56
HOXB3-204ENST00000465120 SIAH1Q8IUQ4 282 aa18.52■□□□□ 0.56
HOXB3-204ENST00000465120 STRBPQ96SI9 672 aaKnown RBP18.52■□□□□ 0.56
HOXB3-204ENST00000465120 SPATC1LQ9H0A9 340 aa18.52■□□□□ 0.56
HOXB3-204ENST00000465120 KANSL2Q9H9L4 492 aa18.52■□□□□ 0.56
HOXB3-204ENST00000465120 MKNK2Q9HBH9 465 aa18.52■□□□□ 0.56
HOXB3-204ENST00000465120 RNF113AO15541 343 aaKnown RBP18.51■□□□□ 0.55
HOXB3-204ENST00000465120 GRB14Q14449 540 aa18.51■□□□□ 0.55
HOXB3-204ENST00000465120 LRRFIP1Q32MZ4 808 aaKnown RBP18.51■□□□□ 0.55
HOXB3-204ENST00000465120 NCAPG2Q86XI2 1143 aa18.51■□□□□ 0.55
HOXB3-204ENST00000465120 MB21D1Q8N884 522 aa18.51■□□□□ 0.55
HOXB3-204ENST00000465120 APPBP2Q92624 585 aa18.51■□□□□ 0.55
HOXB3-204ENST00000465120 FLRT1Q9NZU1 646 aa18.51■□□□□ 0.55
HOXB3-204ENST00000465120 ZBTB47Q9UFB7 747 aaPredicted RBP18.51■□□□□ 0.55
HOXB3-204ENST00000465120 WDR46O15213 610 aaKnown RBP18.5■□□□□ 0.55
HOXB3-204ENST00000465120 STRNO43815 780 aa18.5■□□□□ 0.55
HOXB3-204ENST00000465120 ZFYP08048 801 aaPredicted RBP18.5■□□□□ 0.55
HOXB3-204ENST00000465120 ERCC3P19447 782 aa18.5■□□□□ 0.55
HOXB3-204ENST00000465120 CYP2C19P33261 490 aa18.5■□□□□ 0.55
HOXB3-204ENST00000465120 NPLOC4Q8TAT6 608 aa18.5■□□□□ 0.55
HOXB3-204ENST00000465120 OSBP2Q969R2 916 aa18.5■□□□□ 0.55
HOXB3-204ENST00000465120 ATG4CQ96DT6 458 aa18.5■□□□□ 0.55
HOXB3-204ENST00000465120 GOPCQ9HD26 462 aa18.5■□□□□ 0.55
HOXB3-204ENST00000465120 STAP2Q9UGK3 403 aa18.5■□□□□ 0.55
HOXB3-204ENST00000465120 ZMYND8Q9ULU4 1186 aaPredicted RBP18.5■□□□□ 0.55
HOXB3-204ENST00000465120 TRIOBPQ9H2D6 2365 aa18.5■□□□□ 0.55
HOXB3-204ENST00000465120 GSG1L2A8MUP6 293 aa18.49■□□□□ 0.55
HOXB3-204ENST00000465120 ERC2O15083 957 aa18.49■□□□□ 0.55
HOXB3-204ENST00000465120 ADORA2AP29274 412 aa18.49■□□□□ 0.55
HOXB3-204ENST00000465120 TDO2P48775 406 aa18.49■□□□□ 0.55
HOXB3-204ENST00000465120 MNX1P50219 401 aaPredicted RBP18.49■□□□□ 0.55
HOXB3-204ENST00000465120 LHX8Q68G74 356 aa18.49■□□□□ 0.55
HOXB3-204ENST00000465120 MROH8Q9H579 483 aa18.49■□□□□ 0.55
HOXB3-204ENST00000465120 SLC5A4Q9NY91 659 aa18.49■□□□□ 0.55
HOXB3-204ENST00000465120 PCDHB15Q9Y5E8 787 aa18.49■□□□□ 0.55
HOXB3-204ENST00000465120 GPAA1O43292 621 aa18.48■□□□□ 0.55
HOXB3-204ENST00000465120 HOXC6P09630 235 aa18.48■□□□□ 0.55
HOXB3-204ENST00000465120 GNAT2P19087 354 aa18.48■□□□□ 0.55
HOXB3-204ENST00000465120 SBK1Q52WX2 424 aa18.48■□□□□ 0.55
HOXB3-204ENST00000465120 GIMAP6Q6P9H5 292 aa18.48■□□□□ 0.55
HOXB3-204ENST00000465120 SHCBP1Q8NEM2 672 aa18.48■□□□□ 0.55
HOXB3-204ENST00000465120 TTC41PQ6P2S7 1318 aa18.48■□□□□ 0.55
HOXB3-204ENST00000465120 SYN1P17600 705 aa18.47■□□□□ 0.55
HOXB3-204ENST00000465120 ZNF444Q8N0Y2 327 aaPredicted RBP18.47■□□□□ 0.55
HOXB3-204ENST00000465120 FSD1Q9BTV5 496 aa18.47■□□□□ 0.55
HOXB3-204ENST00000465120 DDX20Q9UHI6 824 aaKnown RBP18.47■□□□□ 0.55
HOXB3-204ENST00000465120 M0R2C6 588 aa18.46■□□□□ 0.55
HOXB3-204ENST00000465120 MSCO60682 206 aa18.46■□□□□ 0.55
HOXB3-204ENST00000465120 FCER1AP12319 257 aa18.46■□□□□ 0.55
HOXB3-204ENST00000465120 RRP1P56182 461 aaKnown RBP18.46■□□□□ 0.55
HOXB3-204ENST00000465120 TMEM132BQ14DG7 1078 aa18.46■□□□□ 0.55
HOXB3-204ENST00000465120 FAM83BQ5T0W9 1011 aa18.46■□□□□ 0.55
HOXB3-204ENST00000465120 ZNF287Q9HBT7 754 aa18.46■□□□□ 0.55
HOXB3-204ENST00000465120 FBXO28Q9NVF7 368 aa18.46■□□□□ 0.55
HOXB3-204ENST00000465120 ALPK3Q96L96 1907 aa18.46■□□□□ 0.55
HOXB3-204ENST00000465120 PFASO15067 1338 aa18.46■□□□□ 0.55
HOXB3-204ENST00000465120 PATL2C9JE40 543 aaKnown RBP18.45■□□□□ 0.54
HOXB3-204ENST00000465120 COBLO75128 1261 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms