RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 LAMA4Q16363 1823 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 PSMD14O00487 310 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 CDKL5O76039 1030 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 MYCNP04198 464 aaPredicted RBP12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 HSPD1P10809 573 aaKnown RBP12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 EPB41P11171 864 aaKnown RBP12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 TATP17735 454 aaPredicted RBP12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 GPTP24298 496 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 CDC27P30260 824 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 RDXP35241 583 aaKnown RBP12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 GGCXP38435 758 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 FNTAP49354 379 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 PLCB4Q15147 1175 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 CWF19L2Q2TBE0 894 aaKnown RBP12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 IQCEQ6IPM2 695 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 CCDC70Q6NSX1 233 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 CCNI2Q6ZMN8 369 aaPredicted RBP12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 ZNF662Q6ZS27 426 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 KRI1Q8N9T8 703 aaKnown RBP12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 KDM3BQ7LBC6 1761 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 AGPSO00116 658 aa12.98□□□□□ -0.33
TNRC6A-205ENST00000464539 ZEB2O60315 1214 aa12.98□□□□□ -0.33
TNRC6A-205ENST00000464539 AKAP17AQ02040 695 aaKnown RBP12.98□□□□□ -0.33
TNRC6A-205ENST00000464539 FMR1Q06787 632 aaKnown RBP eCLIP12.98□□□□□ -0.33
TNRC6A-205ENST00000464539 TTC39AQ5SRH9 613 aa12.98□□□□□ -0.33
TNRC6A-205ENST00000464539 FBXW10Q5XX13 1052 aa12.98□□□□□ -0.33
TNRC6A-205ENST00000464539 SMIM5Q71RC9 77 aa12.98□□□□□ -0.33
TNRC6A-205ENST00000464539 OTUD6BQ8N6M0 293 aa12.98□□□□□ -0.33
TNRC6A-205ENST00000464539 ZNF579Q8NAF0 562 aaKnown RBP12.98□□□□□ -0.33
TNRC6A-205ENST00000464539 ADD3Q9UEY8 706 aaKnown RBP12.98□□□□□ -0.33
TNRC6A-205ENST00000464539 KCPQ6ZWJ8 1503 aa12.98□□□□□ -0.33
TNRC6A-205ENST00000464539 A0A0G2JLW4 131 aa12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 GOLGA6BA6NDN3 693 aa12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 BTBD11A6QL63 1104 aa12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 ERCC3P19447 782 aa12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 PTPN21Q16825 1174 aa12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 PLEKHO1Q53GL0 409 aaPredicted RBP12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 PAPD7Q5XG87 772 aaKnown RBP12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 APTXQ7Z2E3 356 aaKnown RBP12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 EHBP1Q8NDI1 1231 aa12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 SPATA20Q8TB22 786 aa12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 HAUS4Q9H6D7 363 aa12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 SAMSN1Q9NSI8 373 aaKnown RBP12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 HPS5Q9UPZ3 1129 aa12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 KLF18A0A0U1RQI7 1052 aa12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 MEFVO15553 781 aaPredicted RBP12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 CLSTN1O94985 981 aa12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 PRR29P0C7W0 189 aa12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 DRP2Q13474 957 aa12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 ALS2CLQ60I27 953 aa12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 CPLX2Q6PUV4 134 aaKnown RBP12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 VPS37DQ86XT2 251 aa12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 CDC5LQ99459 802 aaKnown RBP12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 FAM184BQ9ULE4 1060 aa12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 SAR1BQ9Y6B6 198 aa12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 CAPN7Q9Y6W3 813 aa12.97□□□□□ -0.33
TNRC6A-205ENST00000464539 HEG1Q9ULI3 1381 aa12.96□□□□□ -0.33
TNRC6A-205ENST00000464539 PKD1L3Q7Z443 1732 aa12.96□□□□□ -0.33
TNRC6A-205ENST00000464539 TNRC6CQ9HCJ0 1690 aaKnown RBP12.96□□□□□ -0.33
TNRC6A-205ENST00000464539 SRRM3A6NNA2 597 aaPredicted RBP12.96□□□□□ -0.33
TNRC6A-205ENST00000464539 GOLGA8BA8MQT2 603 aa12.96□□□□□ -0.33
TNRC6A-205ENST00000464539 H0YHG0 523 aa12.96□□□□□ -0.33
TNRC6A-205ENST00000464539 PPP1R12AO14974 1030 aaPredicted RBP12.96□□□□□ -0.33
TNRC6A-205ENST00000464539 GNPATO15228 680 aa12.96□□□□□ -0.33
TNRC6A-205ENST00000464539 TEX33O43247 280 aa12.96□□□□□ -0.33
TNRC6A-205ENST00000464539 PREPLQ4J6C6 727 aaPredicted RBP12.96□□□□□ -0.33
TNRC6A-205ENST00000464539 CCDC50Q8IVM0 306 aa12.96□□□□□ -0.33
TNRC6A-205ENST00000464539 LINC00116Q8NCU8 138 aa12.96□□□□□ -0.33
TNRC6A-205ENST00000464539 ALG1Q9BT22 464 aa12.96□□□□□ -0.33
TNRC6A-205ENST00000464539 SELENOOQ9BVL4 669 aa12.96□□□□□ -0.33
TNRC6A-205ENST00000464539 RRAGCQ9HB90 399 aa12.96□□□□□ -0.33
TNRC6A-205ENST00000464539 CCDC87Q9NVE4 849 aa12.96□□□□□ -0.33
TNRC6A-205ENST00000464539 BCCIPQ9P287 314 aaKnown RBP eCLIP12.96□□□□□ -0.33
TNRC6A-205ENST00000464539 MCM8Q9UJA3 840 aa12.96□□□□□ -0.33
TNRC6A-205ENST00000464539 RGPD2P0DJD1 1756 aa12.96□□□□□ -0.33
TNRC6A-205ENST00000464539 GRIN2DO15399 1336 aa12.96□□□□□ -0.34
TNRC6A-205ENST00000464539 ZMYM6O95789 1325 aa12.96□□□□□ -0.34
TNRC6A-205ENST00000464539 LOC102724428A0A0B4J2F2 783 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 ANXA1P04083 346 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 DPEP1P16444 411 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 SIK1P57059 783 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 GNGT1P63211 74 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 NEXNQ0ZGT2 675 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 TFCP2Q12800 502 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 IMMTQ16891 758 aaKnown RBP12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 SLC9C2Q5TAH2 1124 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 EMC10Q5UCC4 262 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 CDKAL1Q5VV42 579 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 NLGN1Q8N2Q7 840 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 TBC1D22AQ8WUA7 517 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 GPR108Q9NPR9 543 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 CCDC189A1A4V9 331 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 LRRC10BA6NIK2 292 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 RNF113AO15541 343 aaKnown RBP12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 PRC1O43663 620 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 CASP14P31944 242 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 ELF1P32519 619 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 RFX5P48382 616 aaPredicted RBP12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 PIP4K2AP48426 406 aaPredicted RBP12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 SMTNP53814 917 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms