RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 HSPA12BQ96MM6 686 aa7.33□□□□□ -1.24
USP25-207ENST00000464435 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.33□□□□□ -1.24
USP25-207ENST00000464435 RC3H2Q9HBD1 1191 aaKnown RBP7.33□□□□□ -1.24
USP25-207ENST00000464435 CORINQ9Y5Q5 1042 aa7.33□□□□□ -1.24
USP25-207ENST00000464435 CNTNAP4Q9C0A0 1308 aa7.32□□□□□ -1.24
USP25-207ENST00000464435 ZP2Q05996 745 aa7.32□□□□□ -1.24
USP25-207ENST00000464435 REV1Q9UBZ9 1251 aa7.32□□□□□ -1.24
USP25-207ENST00000464435 PRR33A8MZF0 331 aa7.31□□□□□ -1.24
USP25-207ENST00000464435 ATE1O95260 518 aa7.31□□□□□ -1.24
USP25-207ENST00000464435 HTR3BO95264 441 aa7.31□□□□□ -1.24
USP25-207ENST00000464435 CBX7O95931 251 aa7.31□□□□□ -1.24
USP25-207ENST00000464435 CD96P40200 585 aa7.31□□□□□ -1.24
USP25-207ENST00000464435 SEZ6Q53EL9 994 aa7.31□□□□□ -1.24
USP25-207ENST00000464435 TMPRSS7Q7RTY8 843 aa7.31□□□□□ -1.24
USP25-207ENST00000464435 VPS37DQ86XT2 251 aa7.31□□□□□ -1.24
USP25-207ENST00000464435 FLAD1Q8NFF5 587 aa7.31□□□□□ -1.24
USP25-207ENST00000464435 CCDC74BQ96LY2 380 aa7.31□□□□□ -1.24
USP25-207ENST00000464435 DPH2Q9BQC3 489 aaPredicted RBP7.31□□□□□ -1.24
USP25-207ENST00000464435 KCNH3Q9ULD8 1083 aa7.31□□□□□ -1.24
USP25-207ENST00000464435 POLR3KQ9Y2Y1 108 aaPredicted RBP7.31□□□□□ -1.24
USP25-207ENST00000464435 PAPLNO95428 1278 aa7.3□□□□□ -1.24
USP25-207ENST00000464435 C8AP07357 584 aa7.3□□□□□ -1.24
USP25-207ENST00000464435 SOX9P48436 509 aa7.3□□□□□ -1.24
USP25-207ENST00000464435 TNK2Q07912 1038 aa7.3□□□□□ -1.24
USP25-207ENST00000464435 CDKAL1Q5VV42 579 aa7.3□□□□□ -1.24
USP25-207ENST00000464435 PPP1R13LQ8WUF5 828 aa7.3□□□□□ -1.24
USP25-207ENST00000464435 RNF141Q8WVD5 230 aa7.3□□□□□ -1.24
USP25-207ENST00000464435 NKD1Q969G9 470 aa7.3□□□□□ -1.24
USP25-207ENST00000464435 SEC16BQ96JE7 1060 aa7.3□□□□□ -1.24
USP25-207ENST00000464435 TRIT1Q9H3H1 467 aaKnown RBP7.3□□□□□ -1.24
USP25-207ENST00000464435 ADAMTS6Q9UKP5 1117 aa7.3□□□□□ -1.24
USP25-207ENST00000464435 CCDC81Q6ZN84 652 aa7.29□□□□□ -1.24
USP25-207ENST00000464435 SLITRK4Q8IW52 837 aa7.29□□□□□ -1.24
USP25-207ENST00000464435 REXO1Q8N1G1 1221 aaKnown RBP7.29□□□□□ -1.24
USP25-207ENST00000464435 LRRN4CLQ8ND94 238 aa7.29□□□□□ -1.24
USP25-207ENST00000464435 SPATA32Q96LK8 384 aa7.29□□□□□ -1.24
USP25-207ENST00000464435 PPT2Q9UMR5 302 aa7.29□□□□□ -1.24
USP25-207ENST00000464435 UPK3BL1B0FP48 263 aa7.28□□□□□ -1.24
USP25-207ENST00000464435 UPK3BL2E5RIL1 263 aa7.28□□□□□ -1.24
USP25-207ENST00000464435 H3BS24 57 aa7.28□□□□□ -1.24
USP25-207ENST00000464435 POU5F2Q8N7G0 328 aa7.28□□□□□ -1.24
USP25-207ENST00000464435 ASPNQ9BXN1 380 aa7.28□□□□□ -1.24
USP25-207ENST00000464435 GPR62Q9BZJ7 368 aa7.28□□□□□ -1.24
USP25-207ENST00000464435 EHMT1Q9H9B1 1298 aa7.28□□□□□ -1.24
USP25-207ENST00000464435 ATP13A1Q9HD20 1204 aa7.28□□□□□ -1.24
USP25-207ENST00000464435 CHURC1-FNTBB4DL54 471 aa7.27□□□□□ -1.25
USP25-207ENST00000464435 SSBP05455 408 aaKnown RBP eCLIP7.27□□□□□ -1.25
USP25-207ENST00000464435 SRFP11831 508 aa7.27□□□□□ -1.25
USP25-207ENST00000464435 TMEM40Q8WWA1 233 aa7.27□□□□□ -1.25
USP25-207ENST00000464435 UBE2FQ969M7 185 aa7.27□□□□□ -1.25
USP25-207ENST00000464435 ARMC5Q96C12 935 aa7.27□□□□□ -1.25
USP25-207ENST00000464435 Q96M66 194 aa7.27□□□□□ -1.25
USP25-207ENST00000464435 ZNF408Q9H9D4 720 aa7.27□□□□□ -1.25
USP25-207ENST00000464435 CARS2Q9HA77 564 aaKnown RBP7.27□□□□□ -1.25
USP25-207ENST00000464435 BRMS1Q9HCU9 246 aa7.27□□□□□ -1.25
USP25-207ENST00000464435 GPATCH2Q9NW75 528 aa7.27□□□□□ -1.25
USP25-207ENST00000464435 MRVI1Q9Y6F6 885 aa7.27□□□□□ -1.25
USP25-207ENST00000464435 RGS13O14921 159 aa7.26□□□□□ -1.25
USP25-207ENST00000464435 GRIN3BO60391 1043 aa7.26□□□□□ -1.25
USP25-207ENST00000464435 AFMP43652 599 aa7.26□□□□□ -1.25
USP25-207ENST00000464435 ZNF165P49910 485 aa7.26□□□□□ -1.25
USP25-207ENST00000464435 LRRFIP1Q32MZ4 808 aaKnown RBP7.26□□□□□ -1.25
USP25-207ENST00000464435 LCE4AQ5TA78 99 aa7.26□□□□□ -1.25
USP25-207ENST00000464435 PMFBP1Q8TBY8 1022 aa7.26□□□□□ -1.25
USP25-207ENST00000464435 LNPKQ9C0E8 428 aa7.26□□□□□ -1.25
USP25-207ENST00000464435 GMIPQ9P107 970 aa7.26□□□□□ -1.25
USP25-207ENST00000464435 ZSWIM5Q9P217 1185 aa7.26□□□□□ -1.25
USP25-207ENST00000464435 KLHL3Q9UH77 587 aa7.26□□□□□ -1.25
USP25-207ENST00000464435 CTNND2Q9UQB3 1225 aa7.26□□□□□ -1.25
USP25-207ENST00000464435 SLC22A31A6NKX4 558 aa7.25□□□□□ -1.25
USP25-207ENST00000464435 STK10O94804 968 aaKnown RBP7.25□□□□□ -1.25
USP25-207ENST00000464435 MCM4P33991 863 aa7.25□□□□□ -1.25
USP25-207ENST00000464435 ETFBP38117 255 aa7.25□□□□□ -1.25
USP25-207ENST00000464435 GDNFP39905 211 aa7.25□□□□□ -1.25
USP25-207ENST00000464435 CCNFP41002 786 aa7.25□□□□□ -1.25
USP25-207ENST00000464435 CLCQ05315 142 aa7.25□□□□□ -1.25
USP25-207ENST00000464435 COL9A2Q14055 689 aaPredicted RBP7.25□□□□□ -1.25
USP25-207ENST00000464435 CDCP2Q5VXM1 449 aa7.25□□□□□ -1.25
USP25-207ENST00000464435 GK5Q6ZS86 529 aa7.25□□□□□ -1.25
USP25-207ENST00000464435 DPH6Q7L8W6 267 aa7.25□□□□□ -1.25
USP25-207ENST00000464435 PHACTR4Q8IZ21 702 aa7.25□□□□□ -1.25
USP25-207ENST00000464435 DTWD2Q8NBA8 298 aa7.25□□□□□ -1.25
USP25-207ENST00000464435 ANAPC16Q96DE5 110 aa7.25□□□□□ -1.25
USP25-207ENST00000464435 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.25□□□□□ -1.25
USP25-207ENST00000464435 DUSP15Q9H1R2 295 aaPredicted RBP7.25□□□□□ -1.25
USP25-207ENST00000464435 PCDHB14Q9Y5E9 798 aa7.25□□□□□ -1.25
USP25-207ENST00000464435 GBP1P32455 592 aa7.24□□□□□ -1.25
USP25-207ENST00000464435 CHMP4BP1P59074 171 aa7.24□□□□□ -1.25
USP25-207ENST00000464435 RNF4P78317 190 aa7.24□□□□□ -1.25
USP25-207ENST00000464435 GAB4Q2WGN9 574 aa7.24□□□□□ -1.25
USP25-207ENST00000464435 FAM168AQ92567 244 aa7.24□□□□□ -1.25
USP25-207ENST00000464435 SHDQ96IW2 340 aa7.24□□□□□ -1.25
USP25-207ENST00000464435 KREMEN1Q96MU8 473 aa7.24□□□□□ -1.25
USP25-207ENST00000464435 SRRTQ9BXP5 876 aaKnown RBP7.24□□□□□ -1.25
USP25-207ENST00000464435 FAM53CQ9NYF3 392 aa7.24□□□□□ -1.25
USP25-207ENST00000464435 STRIP2Q9ULQ0 834 aa7.24□□□□□ -1.25
USP25-207ENST00000464435 RAG1P15918 1043 aa7.23□□□□□ -1.25
USP25-207ENST00000464435 RBL2Q08999 1139 aa7.23□□□□□ -1.25
USP25-207ENST00000464435 TSPYL5Q86VY4 417 aaPredicted RBP7.23□□□□□ -1.25
USP25-207ENST00000464435 FAM169BQ8N8A8 192 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms