RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 AFAP1L1Q8TED9 768 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 PAIP2Q9BPZ3 127 aaKnown RBP10.14□□□□□ -0.79
HPS4-208ENST00000464362 TSPOAP1O95153 1857 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 SOS2Q07890 1332 aaPredicted RBP10.14□□□□□ -0.79
HPS4-208ENST00000464362 EFCAB8A8MWE9 144 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 DMTNQ08495 405 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 FAM98CQ17RN3 349 aaKnown RBP10.14□□□□□ -0.79
HPS4-208ENST00000464362 FRMPD1Q5SYB0 1578 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 RICTORQ6R327 1708 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 RASSF4Q9H2L5 321 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 SAR1BQ9Y6B6 198 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 MAP3K15Q6ZN16 1313 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 KIDINS220Q9ULH0 1771 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 GOLGA6CA6NDK9 693 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 SH2B2O14492 632 aaPredicted RBP10.14□□□□□ -0.79
HPS4-208ENST00000464362 NDUFAB1O14561 156 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 OPA1O60313 960 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 GOLGA6DP0CG33 693 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 NLRP10Q86W26 655 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 CEP57Q86XR8 500 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 FMR1NBQ8N0W7 255 aaPredicted RBP10.14□□□□□ -0.79
HPS4-208ENST00000464362 OTUD6BQ8N6M0 293 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 GIMAP7Q8NHV1 300 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 ERMNQ8TAM6 284 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 UBLCP1Q8WVY7 318 aaPredicted RBP10.14□□□□□ -0.79
HPS4-208ENST00000464362 SELENOSQ9BQE4 189 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 IFIH1Q9BYX4 1025 aaKnown RBP10.14□□□□□ -0.79
HPS4-208ENST00000464362 ST7Q9NRC1 585 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 GOLGA6AQ9NYA3 693 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 ALKQ9UM73 1620 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 SMCO2A6NFE2 343 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 KIF28PB7ZC32 967 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 H7C1W4 665 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 STX10O60499 249 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 CDC27P30260 824 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 GUCY2FP51841 1108 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 CYP27A1Q02318 531 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 BLIDQ8IZY5 108 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 TTLL11Q8NHH1 800 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 IRX2Q9BZI1 471 aaPredicted RBP10.13□□□□□ -0.79
HPS4-208ENST00000464362 CPVLQ9H3G5 476 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 EPN1Q9Y6I3 576 aaPredicted RBP10.13□□□□□ -0.79
HPS4-208ENST00000464362 FRMPD2Q68DX3 1309 aaPredicted RBP10.13□□□□□ -0.79
HPS4-208ENST00000464362 SCG2P13521 617 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 TNIP1Q15025 636 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 RDH13Q8NBN7 331 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 OXER1Q8TDS5 423 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 CPS1P31327 1500 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 HECW2Q9P2P5 1572 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 GOLGA6BA6NDN3 693 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 CEP104O60308 925 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 CXCR5P32302 372 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 ATP1A2P50993 1020 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 USH1GQ495M9 461 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 KMT5BQ4FZB7 885 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 DPF2Q92785 391 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 LRRC27Q9C0I9 530 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 NBPF26B4DH59 902 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 B4DLN1 442 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 LONRF2Q1L5Z9 754 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 NBPF14Q5TI25 921 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 NBPF10Q6P3W6 841 aaKnown RBP10.13□□□□□ -0.79
HPS4-208ENST00000464362 PLA2G4DQ86XP0 818 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 LRRC47Q8N1G4 583 aaKnown RBP10.13□□□□□ -0.79
HPS4-208ENST00000464362 FNBP4Q8N3X1 1017 aaPredicted RBP10.13□□□□□ -0.79
HPS4-208ENST00000464362 NBPF15Q8N660 670 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 SELENOOQ9BVL4 669 aa10.13□□□□□ -0.79
HPS4-208ENST00000464362 MED23Q9ULK4 1368 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 PLEKHA8P1O95397 391 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 GTF2A1P52655 376 aaPredicted RBP10.12□□□□□ -0.79
HPS4-208ENST00000464362 MICALCLQ6ZW33 695 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 KSR1Q8IVT5 923 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 REXO1Q8N1G1 1221 aaKnown RBP10.12□□□□□ -0.79
HPS4-208ENST00000464362 PIGBQ92521 554 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 PARD6BQ9BYG5 372 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 TMEM94Q12767 1356 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 KLRF2D3W0D1 207 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 FAM13AO94988 1023 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 MMP1P03956 469 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 COPB1P53618 953 aaKnown RBP10.12□□□□□ -0.79
HPS4-208ENST00000464362 CNNM4Q6P4Q7 775 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 ADAT2Q7Z6V5 191 aaKnown RBP10.12□□□□□ -0.79
HPS4-208ENST00000464362 VSTM4Q8IW00 320 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 CNBD1Q8NA66 436 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 GPR108Q9NPR9 543 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 IKBKBO14920 756 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 AP5Z1O43299 807 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 PPP6R2O75170 966 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 RPN1P04843 607 aaKnown RBP10.12□□□□□ -0.79
HPS4-208ENST00000464362 IFNAR1P17181 557 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 CTNNA2P26232 953 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 CDC25BP30305 580 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 ST5P78524 1137 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 HS2ST1Q7LGA3 356 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 CPLX4Q7Z7G2 160 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 VEZTQ9HBM0 779 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 ADGRB3O60242 1522 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 ARHGEF40Q8TER5 1519 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 DEPDC5O75140 1603 aa10.12□□□□□ -0.79
HPS4-208ENST00000464362 MROH1Q8NDA8 1641 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms